RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 INAFM1C9JVW0 142 aa10.28□□□□□ -0.76
LDB3-207ENST00000542786 TSHBP01222 138 aa10.28□□□□□ -0.76
LDB3-207ENST00000542786 HTN1P15515 57 aa10.28□□□□□ -0.76
LDB3-207ENST00000542786 ERASQ7Z444 233 aa10.28□□□□□ -0.76
LDB3-207ENST00000542786 BAALCQ8WXS3 180 aa10.28□□□□□ -0.76
LDB3-207ENST00000542786 LINC01587Q99440 93 aa10.28□□□□□ -0.76
LDB3-207ENST00000542786 XCL2Q9UBD3 114 aa10.28□□□□□ -0.76
LDB3-207ENST00000542786 NACAE9PAV3 2078 aa10.28□□□□□ -0.76
LDB3-207ENST00000542786 IGKV2D-26A0A0A0MRZ7 120 aa10.27□□□□□ -0.76
LDB3-207ENST00000542786 STHQ8IWL8 128 aa10.27□□□□□ -0.76
LDB3-207ENST00000542786 NSD1Q96L73 2696 aaPredicted RBP10.27□□□□□ -0.77
LDB3-207ENST00000542786 CMC4P56277 68 aaPredicted RBP10.27□□□□□ -0.77
LDB3-207ENST00000542786 MPV17L2Q567V2 206 aa10.27□□□□□ -0.77
LDB3-207ENST00000542786 PCP2Q8IVA1 136 aa10.27□□□□□ -0.77
LDB3-207ENST00000542786 SPXQ9BT56 116 aa10.27□□□□□ -0.77
LDB3-207ENST00000542786 CYSLTR1Q9Y271 337 aa10.27□□□□□ -0.77
LDB3-207ENST00000542786 FN1P02751 2386 aaKnown RBP10.26□□□□□ -0.77
LDB3-207ENST00000542786 A8MWV9 139 aa10.26□□□□□ -0.77
LDB3-207ENST00000542786 F8VRH5 84 aa10.26□□□□□ -0.77
LDB3-207ENST00000542786 AZU1P20160 251 aa10.26□□□□□ -0.77
LDB3-207ENST00000542786 BVES-AS1Q5T3Y7 98 aa10.26□□□□□ -0.77
LDB3-207ENST00000542786 CFAP126Q5VTH2 177 aa10.26□□□□□ -0.77
LDB3-207ENST00000542786 Q6ZSN1 163 aa10.26□□□□□ -0.77
LDB3-207ENST00000542786 H7C1H1 209 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 P0DMU3 169 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 FAM231AP0DMU4 169 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 FAM231CP0DMU5 169 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 TCTAP57738 103 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 RHOHQ15669 191 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 LINC00482Q8N8I6 264 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 KIR2DL4Q99706 377 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 WFDC10AQ9H1F0 79 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 TP53TG1Q9Y2A0 90 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 RS1O15537 224 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 FOSL1P15407 271 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 PLNP26678 52 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 RPL39P62891 51 aaKnown RBP10.25□□□□□ -0.77
LDB3-207ENST00000542786 DEFB104AQ8WTQ1 72 aa10.25□□□□□ -0.77
LDB3-207ENST00000542786 BAHCC1Q9P281 2608 aa10.24□□□□□ -0.77
LDB3-207ENST00000542786 PRSS29PA6NIE9 313 aa10.24□□□□□ -0.77
LDB3-207ENST00000542786 G0S2P27469 103 aa10.24□□□□□ -0.77
LDB3-207ENST00000542786 ZC2HC1BQ5TFG8 222 aa10.24□□□□□ -0.77
LDB3-207ENST00000542786 RNASE8Q8TDE3 154 aaKnown RBP10.24□□□□□ -0.77
LDB3-207ENST00000542786 TIMM17AQ99595 171 aa10.24□□□□□ -0.77
LDB3-207ENST00000542786 MRPL16Q9NX20 251 aaKnown RBP10.24□□□□□ -0.77
LDB3-207ENST00000542786 CHTOPQ9Y3Y2 248 aaKnown RBP10.24□□□□□ -0.77
LDB3-207ENST00000542786 SIVA1O15304 175 aa10.23□□□□□ -0.77
LDB3-207ENST00000542786 GTSCR1Q86UQ5 136 aa10.23□□□□□ -0.77
LDB3-207ENST00000542786 Q9UF83 564 aa10.23□□□□□ -0.77
LDB3-207ENST00000542786 NIPBLQ6KC79 2804 aaeCLIP10.23□□□□□ -0.77
LDB3-207ENST00000542786 IGHV3-73A0A0B4J1V6 119 aa10.23□□□□□ -0.77
LDB3-207ENST00000542786 NMUP48645 174 aa10.23□□□□□ -0.77
LDB3-207ENST00000542786 TMEM141Q96I45 108 aa10.23□□□□□ -0.77
LDB3-207ENST00000542786 C2CD3Q4AC94 2353 aa10.23□□□□□ -0.77
LDB3-207ENST00000542786 HIVEP1P15822 2718 aa10.22□□□□□ -0.77
LDB3-207ENST00000542786 FLNBO75369 2602 aaKnown RBP10.22□□□□□ -0.77
LDB3-207ENST00000542786 I3L3M4 83 aa10.22□□□□□ -0.77
LDB3-207ENST00000542786 C12orf54Q6X4T0 127 aa10.22□□□□□ -0.77
LDB3-207ENST00000542786 LINC00469Q8N7U9 141 aa10.22□□□□□ -0.77
LDB3-207ENST00000542786 TTTY13Q9BZ97 58 aa10.22□□□□□ -0.77
LDB3-207ENST00000542786 JMJD1CQ15652 2540 aa10.22□□□□□ -0.77
LDB3-207ENST00000542786 IGLV4-69A0A075B6H9 119 aa10.21□□□□□ -0.77
LDB3-207ENST00000542786 RHODO00212 210 aa10.21□□□□□ -0.77
LDB3-207ENST00000542786 IGHV3-53P01767 116 aa10.21□□□□□ -0.77
LDB3-207ENST00000542786 C20orf203Q8NBC4 194 aa10.21□□□□□ -0.77
LDB3-207ENST00000542786 CSNK1G2-AS1Q8NCQ2 148 aa10.21□□□□□ -0.77
LDB3-207ENST00000542786 ZMAT5Q9UDW3 170 aaKnown RBP10.21□□□□□ -0.78
LDB3-207ENST00000542786 PLAC8L1A1L4L8 177 aa10.2□□□□□ -0.78
LDB3-207ENST00000542786 CRLF1O75462 422 aa10.2□□□□□ -0.78
LDB3-207ENST00000542786 SPATA3Q8NHX4 192 aa10.2□□□□□ -0.78
LDB3-207ENST00000542786 CST9LQ9H4G1 147 aa10.2□□□□□ -0.78
LDB3-207ENST00000542786 TMEM97Q5BJF2 176 aa10.19□□□□□ -0.78
LDB3-207ENST00000542786 TMEM263Q8WUH6 116 aaKnown RBP10.19□□□□□ -0.78
LDB3-207ENST00000542786 FAM104AQ969W3 186 aa10.19□□□□□ -0.78
LDB3-207ENST00000542786 TMEM208Q9BTX3 173 aa10.19□□□□□ -0.78
LDB3-207ENST00000542786 HIGD1BQ9P298 99 aa10.19□□□□□ -0.78
LDB3-207ENST00000542786 IGHV3OR16-12A0A075B7B8 117 aa10.19□□□□□ -0.78
LDB3-207ENST00000542786 PMVKQ15126 192 aa10.19□□□□□ -0.78
LDB3-207ENST00000542786 MAPKAPK5-AS1Q8N8E1 139 aa10.19□□□□□ -0.78
LDB3-207ENST00000542786 ZNF25P17030 456 aaPredicted RBP10.18□□□□□ -0.78
LDB3-207ENST00000542786 RPL35AP18077 110 aaKnown RBP10.18□□□□□ -0.78
LDB3-207ENST00000542786 HSD52Q0P140 79 aa10.18□□□□□ -0.78
LDB3-207ENST00000542786 Q6ZVH6 145 aa10.18□□□□□ -0.78
LDB3-207ENST00000542786 C11orf86A6NJI1 115 aa10.17□□□□□ -0.78
LDB3-207ENST00000542786 TAX1BP3O14907 124 aa10.17□□□□□ -0.78
LDB3-207ENST00000542786 PF4P02776 101 aa10.17□□□□□ -0.78
LDB3-207ENST00000542786 DAZ2Q13117 558 aaKnown RBP10.17□□□□□ -0.78
LDB3-207ENST00000542786 DNAJC30Q96LL9 226 aa10.17□□□□□ -0.78
LDB3-207ENST00000542786 GAGE1Q13065 139 aa10.17□□□□□ -0.78
LDB3-207ENST00000542786 ORAOV1Q8WV07 137 aa10.17□□□□□ -0.78
LDB3-207ENST00000542786 OPRPNQ99935 248 aaPredicted RBP10.17□□□□□ -0.78
LDB3-207ENST00000542786 COX11Q9Y6N1 276 aa10.17□□□□□ -0.78
LDB3-207ENST00000542786 TRBV25-1A0A075B6N4 114 aa10.16□□□□□ -0.78
LDB3-207ENST00000542786 E9PLD3 99 aa10.16□□□□□ -0.78
LDB3-207ENST00000542786 Q6ZTI0 123 aa10.16□□□□□ -0.78
LDB3-207ENST00000542786 CHCHD7Q9BUK0 85 aa10.16□□□□□ -0.78
LDB3-207ENST00000542786 TNFRSF18Q9Y5U5 241 aa10.16□□□□□ -0.78
LDB3-207ENST00000542786 IGLV4-3A0A075B6K6 122 aa10.15□□□□□ -0.78
LDB3-207ENST00000542786 TRGV1A0A0A0MS02 117 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms