RNA–Protein interactions for RNA: ENST00000542230.6

TMEM50B-210, Transcript of transmembrane protein 50B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50B, Length 2,375 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-210ENST00000542230 NUTF2P61970 127 aaKnown RBP12.46□□□□□ -0.41
TMEM50B-210ENST00000542230 RPL39P62891 51 aaKnown RBP12.46□□□□□ -0.41
TMEM50B-210ENST00000542230 LINC00467Q9BRT7 94 aa12.46□□□□□ -0.41
TMEM50B-210ENST00000542230 UQCR10Q9UDW1 63 aa12.46□□□□□ -0.41
TMEM50B-210ENST00000542230 C2orf66Q6UXQ4 117 aa12.45□□□□□ -0.42
TMEM50B-210ENST00000542230 ORMDL2Q53FV1 153 aa12.45□□□□□ -0.42
TMEM50B-210ENST00000542230 RNASE8Q8TDE3 154 aaKnown RBP12.45□□□□□ -0.42
TMEM50B-210ENST00000542230 TOMM6Q96B49 74 aa12.45□□□□□ -0.42
TMEM50B-210ENST00000542230 COL6A5A8TX70 2615 aa12.45□□□□□ -0.42
TMEM50B-210ENST00000542230 PPP1R17O96001 155 aa12.44□□□□□ -0.42
TMEM50B-210ENST00000542230 ZFP2Q6ZN57 461 aa12.44□□□□□ -0.42
TMEM50B-210ENST00000542230 ZC2HC1BQ5TFG8 222 aa12.44□□□□□ -0.42
TMEM50B-210ENST00000542230 CSNK1G2-AS1Q8NCQ2 148 aa12.44□□□□□ -0.42
TMEM50B-210ENST00000542230 TRBV6-5A0A0K0K1A5 114 aa12.43□□□□□ -0.42
TMEM50B-210ENST00000542230 Q6ZTI0 123 aa12.43□□□□□ -0.42
TMEM50B-210ENST00000542230 SCGB3A1Q96QR1 104 aa12.43□□□□□ -0.42
TMEM50B-210ENST00000542230 FAM110AQ9BQ89 295 aa12.43□□□□□ -0.42
TMEM50B-210ENST00000542230 TRGV1A0A0A0MS02 117 aa12.43□□□□□ -0.42
TMEM50B-210ENST00000542230 TRBV27A0A0K0K1C4 114 aa12.43□□□□□ -0.42
TMEM50B-210ENST00000542230 VCYO14598 125 aa12.43□□□□□ -0.42
TMEM50B-210ENST00000542230 MRPL35Q9NZE8 188 aaKnown RBP12.43□□□□□ -0.42
TMEM50B-210ENST00000542230 CMYA5Q8N3K9 4069 aa12.42□□□□□ -0.42
TMEM50B-210ENST00000542230 ANK2Q01484 3957 aa12.42□□□□□ -0.42
TMEM50B-210ENST00000542230 HSBP1L1C9JCN9 74 aa12.42□□□□□ -0.42
TMEM50B-210ENST00000542230 A8MWV9 139 aa12.42□□□□□ -0.42
TMEM50B-210ENST00000542230 IL17DQ8TAD2 202 aa12.42□□□□□ -0.42
TMEM50B-210ENST00000542230 TP53TG1Q9Y2A0 90 aa12.42□□□□□ -0.42
TMEM50B-210ENST00000542230 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 ATP5LO75964 103 aa12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 TSHBP01222 138 aa12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 IGHV3-53P01767 116 aa12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 HNRNPA3P51991 378 aaKnown RBP12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 CMC4P56277 68 aaPredicted RBP12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 BATFQ16520 125 aa12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 NOP10Q9NPE3 64 aaKnown RBP12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 HHLA3Q9XRX5 114 aa12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 PLAC8L1A1L4L8 177 aa12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 RPL32P62910 135 aaKnown RBP12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 KIR2DL4Q99706 377 aa12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 SPXQ9BT56 116 aa12.41□□□□□ -0.42
TMEM50B-210ENST00000542230 ZNF479Q96JC4 524 aa12.4□□□□□ -0.42
TMEM50B-210ENST00000542230 ZMAT4Q9H898 229 aa12.4□□□□□ -0.42
TMEM50B-210ENST00000542230 OPRPNQ99935 248 aaPredicted RBP12.4□□□□□ -0.43
TMEM50B-210ENST00000542230 TMEM263Q8WUH6 116 aaKnown RBP12.39□□□□□ -0.43
TMEM50B-210ENST00000542230 BAALCQ8WXS3 180 aa12.39□□□□□ -0.43
TMEM50B-210ENST00000542230 IGKV2D-26A0A0A0MRZ7 120 aa12.38□□□□□ -0.43
TMEM50B-210ENST00000542230 M0R143 59 aa12.38□□□□□ -0.43
TMEM50B-210ENST00000542230 RS1O15537 224 aa12.38□□□□□ -0.43
TMEM50B-210ENST00000542230 KRTAP24-1Q3LI83 254 aa12.38□□□□□ -0.43
TMEM50B-210ENST00000542230 TTTY13Q9BZ97 58 aa12.38□□□□□ -0.43
TMEM50B-210ENST00000542230 K7EMI3 77 aa12.38□□□□□ -0.43
TMEM50B-210ENST00000542230 A0A087WX48 190 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 A0A1B0GV90 55 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 C9orf66Q5T8R8 295 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 PCP2Q8IVA1 136 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 NEXN-AS1Q8NBZ9 246 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 PTH2Q96A98 100 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 IGHV3-38A0A0C4DH36 116 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 IGIPA6NJ69 53 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 IGKCP01834 107 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 SLC25A34Q6PIV7 304 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 ERASQ7Z444 233 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 GTSCR1Q86UQ5 136 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 CYSLTR1Q9Y271 337 aa12.37□□□□□ -0.43
TMEM50B-210ENST00000542230 EMP1P54849 157 aa12.36□□□□□ -0.43
TMEM50B-210ENST00000542230 PIK3CD-AS1Q5SR53 167 aa12.36□□□□□ -0.43
TMEM50B-210ENST00000542230 PRSS29PA6NIE9 313 aa12.36□□□□□ -0.43
TMEM50B-210ENST00000542230 I3L3M4 83 aa12.36□□□□□ -0.43
TMEM50B-210ENST00000542230 FGF6P10767 208 aa12.36□□□□□ -0.43
TMEM50B-210ENST00000542230 DPM2O94777 84 aa12.35□□□□□ -0.43
TMEM50B-210ENST00000542230 NMUP48645 174 aa12.35□□□□□ -0.43
TMEM50B-210ENST00000542230 HINT1P49773 126 aaPredicted RBP12.35□□□□□ -0.43
TMEM50B-210ENST00000542230 OR4C5Q8NGB2 326 aa12.35□□□□□ -0.43
TMEM50B-210ENST00000542230 PHLDA1Q8WV24 401 aaPredicted RBP12.35□□□□□ -0.43
TMEM50B-210ENST00000542230 COX8AP10176 69 aa12.35□□□□□ -0.43
TMEM50B-210ENST00000542230 TNFRSF18Q9Y5U5 241 aa12.35□□□□□ -0.43
TMEM50B-210ENST00000542230 NOTCH1P46531 2555 aa12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 GAGE12BA1L429 117 aa12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 H7C1H1 209 aa12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 GAGE7O76087 117 aa12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 GAGE12FP0CL80 117 aa12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 GAGE12GP0CL81 117 aa12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 GAGE12IP0CL82 117 aa12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 INSL3P51460 131 aa12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 RIPPLY3P57055 190 aa12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 C2orf88Q9BSF0 95 aa12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 EDA2RQ9HAV5 297 aa12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 ZMAT5Q9UDW3 170 aaKnown RBP12.34□□□□□ -0.43
TMEM50B-210ENST00000542230 RRN3P1Q2M238 152 aa12.33□□□□□ -0.44
TMEM50B-210ENST00000542230 CEMP1Q6PRD7 247 aaPredicted RBP12.33□□□□□ -0.44
TMEM50B-210ENST00000542230 C2orf91Q6ZV80 131 aa12.33□□□□□ -0.44
TMEM50B-210ENST00000542230 C1QTNF4Q9BXJ3 329 aa12.33□□□□□ -0.44
TMEM50B-210ENST00000542230 CHTOPQ9Y3Y2 248 aaKnown RBP12.33□□□□□ -0.44
TMEM50B-210ENST00000542230 MRPS16Q9Y3D3 137 aaKnown RBP12.33□□□□□ -0.44
TMEM50B-210ENST00000542230 TRAV12-1A0A0B4J245 112 aa12.32□□□□□ -0.44
TMEM50B-210ENST00000542230 C20orf203Q8NBC4 194 aa12.32□□□□□ -0.44
TMEM50B-210ENST00000542230 F8VRH5 84 aa12.32□□□□□ -0.44
TMEM50B-210ENST00000542230 RHODO00212 210 aa12.32□□□□□ -0.44
TMEM50B-210ENST00000542230 DAZ2Q13117 558 aaKnown RBP12.32□□□□□ -0.44
TMEM50B-210ENST00000542230 C16orf74Q96GX8 76 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms