RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 PFN2P35080 140 aa7.65□□□□□ -1.18
TRAF1-202ENST00000540010 TMEM86BQ8N661 226 aa7.65□□□□□ -1.18
TRAF1-202ENST00000540010 LINC00310P59036 64 aa7.65□□□□□ -1.18
TRAF1-202ENST00000540010 IGHV7-4-1A0A0J9YVY3 117 aa7.65□□□□□ -1.19
TRAF1-202ENST00000540010 H3BMM0 161 aa7.65□□□□□ -1.19
TRAF1-202ENST00000540010 UBE2WQ96B02 151 aa7.65□□□□□ -1.19
TRAF1-202ENST00000540010 ZNF493Q6ZR52 646 aa7.64□□□□□ -1.19
TRAF1-202ENST00000540010 LINC01356Q8N9X3 169 aa7.64□□□□□ -1.19
TRAF1-202ENST00000540010 MTORP42345 2549 aa7.64□□□□□ -1.19
TRAF1-202ENST00000540010 A0A0J9YXV3 536 aa7.64□□□□□ -1.19
TRAF1-202ENST00000540010 LINC01548A6NM66 108 aa7.64□□□□□ -1.19
TRAF1-202ENST00000540010 C5orf56Q8N8D9 126 aa7.64□□□□□ -1.19
TRAF1-202ENST00000540010 INSP01308 110 aa7.64□□□□□ -1.19
TRAF1-202ENST00000540010 PTH2Q96A98 100 aa7.64□□□□□ -1.19
TRAF1-202ENST00000540010 MAP1AP78559 2803 aaPredicted RBP7.64□□□□□ -1.19
TRAF1-202ENST00000540010 WI2-2373I1.2A0A1W2PRP0 233 aa7.64□□□□□ -1.19
TRAF1-202ENST00000540010 RS1O15537 224 aa7.63□□□□□ -1.19
TRAF1-202ENST00000540010 EDA2RQ9HAV5 297 aa7.63□□□□□ -1.19
TRAF1-202ENST00000540010 A4D1N5 150 aa7.63□□□□□ -1.19
TRAF1-202ENST00000540010 LEPROTO15243 131 aa7.63□□□□□ -1.19
TRAF1-202ENST00000540010 CFC1BP0CG36 223 aa7.63□□□□□ -1.19
TRAF1-202ENST00000540010 CFC1P0CG37 223 aa7.63□□□□□ -1.19
TRAF1-202ENST00000540010 S100A7L2Q5SY68 101 aa7.63□□□□□ -1.19
TRAF1-202ENST00000540010 JPT2Q9H910 190 aa7.63□□□□□ -1.19
TRAF1-202ENST00000540010 GATA3P23771 443 aa7.62□□□□□ -1.19
TRAF1-202ENST00000540010 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.62□□□□□ -1.19
TRAF1-202ENST00000540010 IGKV2-29A2NJV5 120 aaPredicted RBP7.62□□□□□ -1.19
TRAF1-202ENST00000540010 DEFB136Q30KP8 78 aa7.62□□□□□ -1.19
TRAF1-202ENST00000540010 AJUBAQ96IF1 538 aa7.62□□□□□ -1.19
TRAF1-202ENST00000540010 CRIP1P50238 77 aa7.62□□□□□ -1.19
TRAF1-202ENST00000540010 ZNF48Q96MX3 618 aaPredicted RBP7.62□□□□□ -1.19
TRAF1-202ENST00000540010 CENPEQ02224 2701 aa7.62□□□□□ -1.19
TRAF1-202ENST00000540010 RBAKDNA6NC62 111 aa7.61□□□□□ -1.19
TRAF1-202ENST00000540010 B5MCH6 92 aa7.61□□□□□ -1.19
TRAF1-202ENST00000540010 CARD19Q96LW7 228 aa7.61□□□□□ -1.19
TRAF1-202ENST00000540010 FASNP49327 2511 aaKnown RBP7.61□□□□□ -1.19
TRAF1-202ENST00000540010 IGHV4-59P01825 116 aa7.61□□□□□ -1.19
TRAF1-202ENST00000540010 ZFP2Q6ZN57 461 aa7.61□□□□□ -1.19
TRAF1-202ENST00000540010 ASH1LQ9NR48 2969 aaKnown RBP7.61□□□□□ -1.19
TRAF1-202ENST00000540010 IGKV2D-26A0A0A0MRZ7 120 aa7.61□□□□□ -1.19
TRAF1-202ENST00000540010 SUMO4Q6EEV6 95 aa7.61□□□□□ -1.19
TRAF1-202ENST00000540010 UNQ9165/PRO28630Q6UXU0 137 aa7.61□□□□□ -1.19
TRAF1-202ENST00000540010 C1QTNF4Q9BXJ3 329 aa7.61□□□□□ -1.19
TRAF1-202ENST00000540010 NXPH4O95158 308 aa7.61□□□□□ -1.19
TRAF1-202ENST00000540010 LENEPQ9Y5L5 61 aa7.61□□□□□ -1.19
TRAF1-202ENST00000540010 GAGE7O76087 117 aa7.6□□□□□ -1.19
TRAF1-202ENST00000540010 GAGE12FP0CL80 117 aa7.6□□□□□ -1.19
TRAF1-202ENST00000540010 GAGE12GP0CL81 117 aa7.6□□□□□ -1.19
TRAF1-202ENST00000540010 GAGE12IP0CL82 117 aa7.6□□□□□ -1.19
TRAF1-202ENST00000540010 OPRPNQ99935 248 aaPredicted RBP7.6□□□□□ -1.19
TRAF1-202ENST00000540010 C11orf86A6NJI1 115 aa7.6□□□□□ -1.19
TRAF1-202ENST00000540010 RHODO00212 210 aa7.6□□□□□ -1.19
TRAF1-202ENST00000540010 LGALS1P09382 135 aaKnown RBP7.6□□□□□ -1.19
TRAF1-202ENST00000540010 DAND5Q8N907 189 aa7.6□□□□□ -1.19
TRAF1-202ENST00000540010 LAMTOR3Q9UHA4 124 aa7.6□□□□□ -1.19
TRAF1-202ENST00000540010 TRBV12-3P01733 135 aa7.6□□□□□ -1.19
TRAF1-202ENST00000540010 C15orf53Q8NAA6 179 aa7.6□□□□□ -1.19
TRAF1-202ENST00000540010 SPAG8Q99932 426 aaPredicted RBP7.6□□□□□ -1.19
TRAF1-202ENST00000540010 G3V4G9 280 aa7.59□□□□□ -1.19
TRAF1-202ENST00000540010 KRTAP10-9P60411 292 aa7.59□□□□□ -1.19
TRAF1-202ENST00000540010 RBX1P62877 108 aa7.59□□□□□ -1.19
TRAF1-202ENST00000540010 MUSTN1Q8IVN3 82 aa7.59□□□□□ -1.19
TRAF1-202ENST00000540010 MRPL53Q96EL3 112 aaKnown RBP7.59□□□□□ -1.19
TRAF1-202ENST00000540010 HIGD1BQ9P298 99 aa7.59□□□□□ -1.19
TRAF1-202ENST00000540010 AVPP01185 164 aa7.59□□□□□ -1.19
TRAF1-202ENST00000540010 DEFB113Q30KQ7 82 aa7.59□□□□□ -1.19
TRAF1-202ENST00000540010 BAALCQ8WXS3 180 aa7.59□□□□□ -1.19
TRAF1-202ENST00000540010 ANKRD17O75179 2603 aaKnown RBP7.59□□□□□ -1.19
TRAF1-202ENST00000540010 GAGE6Q13070 117 aa7.59□□□□□ -1.19
TRAF1-202ENST00000540010 DEFB112Q30KQ8 113 aa7.59□□□□□ -1.19
TRAF1-202ENST00000540010 IGF1P05019 195 aa7.59□□□□□ -1.2
TRAF1-202ENST00000540010 Q96MF0 132 aa7.59□□□□□ -1.2
TRAF1-202ENST00000540010 MYCNOSP40205 109 aa7.58□□□□□ -1.2
TRAF1-202ENST00000540010 C16orf54Q6UWD8 224 aa7.58□□□□□ -1.2
TRAF1-202ENST00000540010 F8W735 103 aaPredicted RBP7.58□□□□□ -1.2
TRAF1-202ENST00000540010 Q9H8V8 135 aa7.58□□□□□ -1.2
TRAF1-202ENST00000540010 IFITM1P13164 125 aa7.58□□□□□ -1.2
TRAF1-202ENST00000540010 C9orf153Q5TBE3 101 aa7.58□□□□□ -1.2
TRAF1-202ENST00000540010 Q8N1Y9 231 aa7.58□□□□□ -1.2
TRAF1-202ENST00000540010 PIFOQ8TCI5 191 aa7.58□□□□□ -1.2
TRAF1-202ENST00000540010 A0A096LPF7 62 aa7.57□□□□□ -1.2
TRAF1-202ENST00000540010 A6NDX4 124 aa7.57□□□□□ -1.2
TRAF1-202ENST00000540010 J3QLI3 93 aa7.57□□□□□ -1.2
TRAF1-202ENST00000540010 HOXD3P31249 432 aaPredicted RBP7.57□□□□□ -1.2
TRAF1-202ENST00000540010 APRG1Q8IVJ8 170 aa7.57□□□□□ -1.2
TRAF1-202ENST00000540010 DPH3Q96FX2 82 aa7.57□□□□□ -1.2
TRAF1-202ENST00000540010 TEN1Q86WV5 123 aa7.57□□□□□ -1.2
TRAF1-202ENST00000540010 CCDC140Q96MF4 163 aa7.57□□□□□ -1.2
TRAF1-202ENST00000540010 E9PLD3 99 aa7.57□□□□□ -1.2
TRAF1-202ENST00000540010 PRRC2AP48634 2157 aaKnown RBP7.57□□□□□ -1.2
TRAF1-202ENST00000540010 FOXI1Q12951 378 aa7.57□□□□□ -1.2
TRAF1-202ENST00000540010 C9orf47Q6ZRZ4 202 aa7.57□□□□□ -1.2
TRAF1-202ENST00000540010 ANKRD29Q8N6D5 301 aa7.56□□□□□ -1.2
TRAF1-202ENST00000540010 MDFICQ9P1T7 246 aa7.56□□□□□ -1.2
TRAF1-202ENST00000540010 GAS8-AS1O95177 125 aa7.56□□□□□ -1.2
TRAF1-202ENST00000540010 MAPKAPK5-AS1Q8N8E1 139 aa7.56□□□□□ -1.2
TRAF1-202ENST00000540010 SS18L2Q9UHA2 77 aa7.56□□□□□ -1.2
TRAF1-202ENST00000540010 IGLC6P0CF74 106 aa7.56□□□□□ -1.2
TRAF1-202ENST00000540010 CLPSL2Q6UWE3 100 aa7.56□□□□□ -1.2
TRAF1-202ENST00000540010 U3KQE9 123 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms