RNA–Protein interactions for RNA: ENST00000538485.6

EFCAB11-202, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 2 BASIC

Gene EFCAB11, Length 1,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-202ENST00000538485 FAM231CP0DMU5 169 aa13.85□□□□□ -0.19
EFCAB11-202ENST00000538485 S100A2P29034 98 aa13.85□□□□□ -0.19
EFCAB11-202ENST00000538485 CHCHD1Q96BP2 118 aaKnown RBP13.85□□□□□ -0.19
EFCAB11-202ENST00000538485 HIST1H2BLQ99880 126 aa13.85□□□□□ -0.19
EFCAB11-202ENST00000538485 C20orf78Q9BR46 151 aa13.85□□□□□ -0.19
EFCAB11-202ENST00000538485 IGLV2-18A0A075B6J9 118 aa13.84□□□□□ -0.19
EFCAB11-202ENST00000538485 HSBP1O75506 76 aa13.84□□□□□ -0.19
EFCAB11-202ENST00000538485 FAM19A2Q8N3H0 131 aa13.84□□□□□ -0.19
EFCAB11-202ENST00000538485 AP5S1Q9NUS5 200 aa13.84□□□□□ -0.19
EFCAB11-202ENST00000538485 FABP4P15090 132 aa13.84□□□□□ -0.19
EFCAB11-202ENST00000538485 FA2HQ7L5A8 372 aa13.84□□□□□ -0.19
EFCAB11-202ENST00000538485 MRAPQ8TCY5 172 aa13.84□□□□□ -0.19
EFCAB11-202ENST00000538485 C18orf15Q96N68 181 aa13.84□□□□□ -0.19
EFCAB11-202ENST00000538485 NIT2Q9NQR4 276 aa13.84□□□□□ -0.19
EFCAB11-202ENST00000538485 CELA1Q9UNI1 258 aa13.84□□□□□ -0.19
EFCAB11-202ENST00000538485 H7C1H1 209 aa13.83□□□□□ -0.2
EFCAB11-202ENST00000538485 PMCHL1Q16048 86 aa13.83□□□□□ -0.2
EFCAB11-202ENST00000538485 ST20Q9HBF5 79 aa13.83□□□□□ -0.2
EFCAB11-202ENST00000538485 NXT2Q9NPJ8 142 aaKnown RBP13.83□□□□□ -0.2
EFCAB11-202ENST00000538485 HUWE1Q7Z6Z7 4374 aaKnown RBP13.82□□□□□ -0.2
EFCAB11-202ENST00000538485 PMCHP20382 165 aa13.82□□□□□ -0.2
EFCAB11-202ENST00000538485 Q8N8P6 123 aa13.82□□□□□ -0.2
EFCAB11-202ENST00000538485 SMIM2Q9BVW6 85 aa13.82□□□□□ -0.2
EFCAB11-202ENST00000538485 COL7A1Q02388 2944 aa13.82□□□□□ -0.2
EFCAB11-202ENST00000538485 TRBV6-5A0A0K0K1A5 114 aa13.82□□□□□ -0.2
EFCAB11-202ENST00000538485 AMTP48728 403 aa13.82□□□□□ -0.2
EFCAB11-202ENST00000538485 TMEM70Q9BUB7 260 aa13.82□□□□□ -0.2
EFCAB11-202ENST00000538485 SDHAF1A6NFY7 115 aa13.81□□□□□ -0.2
EFCAB11-202ENST00000538485 POLR2KP53803 58 aaKnown RBP13.81□□□□□ -0.2
EFCAB11-202ENST00000538485 TMEM18Q96B42 140 aa13.81□□□□□ -0.2
EFCAB11-202ENST00000538485 IGHV1-24A0A0C4DH33 117 aa13.8□□□□□ -0.2
EFCAB11-202ENST00000538485 NEGR1Q7Z3B1 354 aa13.8□□□□□ -0.2
EFCAB11-202ENST00000538485 SLC25A29Q8N8R3 303 aa13.8□□□□□ -0.2
EFCAB11-202ENST00000538485 TM2D3Q9BRN9 247 aa13.8□□□□□ -0.2
EFCAB11-202ENST00000538485 MEGF8Q7Z7M0 2845 aa13.8□□□□□ -0.2
EFCAB11-202ENST00000538485 LINC01546A6NGU7 62 aa13.8□□□□□ -0.2
EFCAB11-202ENST00000538485 CIDEAO60543 219 aa13.8□□□□□ -0.2
EFCAB11-202ENST00000538485 SPART-AS1P0CW21 52 aa13.8□□□□□ -0.2
EFCAB11-202ENST00000538485 FHL2Q14192 279 aa13.8□□□□□ -0.2
EFCAB11-202ENST00000538485 TCAPO15273 167 aa13.79□□□□□ -0.2
EFCAB11-202ENST00000538485 NEXN-AS1Q8NBZ9 246 aa13.79□□□□□ -0.2
EFCAB11-202ENST00000538485 TRGV4A0A0C4DH28 118 aa13.78□□□□□ -0.2
EFCAB11-202ENST00000538485 RPL32P62910 135 aaKnown RBP13.78□□□□□ -0.2
EFCAB11-202ENST00000538485 PACRGQ96M98 296 aaPredicted RBP13.78□□□□□ -0.2
EFCAB11-202ENST00000538485 SPATA25Q9BR10 227 aa13.78□□□□□ -0.2
EFCAB11-202ENST00000538485 DNAH9Q9NYC9 4486 aa13.78□□□□□ -0.2
EFCAB11-202ENST00000538485 A0A096LNJ9 63 aa13.78□□□□□ -0.2
EFCAB11-202ENST00000538485 TRBV27A0A0K0K1C4 114 aa13.78□□□□□ -0.2
EFCAB11-202ENST00000538485 K7EQD1 137 aa13.78□□□□□ -0.2
EFCAB11-202ENST00000538485 AKR1D1P51857 326 aa13.78□□□□□ -0.2
EFCAB11-202ENST00000538485 DAD1P61803 113 aa13.78□□□□□ -0.2
EFCAB11-202ENST00000538485 DEFB104AQ8WTQ1 72 aa13.78□□□□□ -0.2
EFCAB11-202ENST00000538485 OR10D4PQ8NGN7 298 aa13.77□□□□□ -0.21
EFCAB11-202ENST00000538485 TNFRSF18Q9Y5U5 241 aa13.77□□□□□ -0.21
EFCAB11-202ENST00000538485 TRBV6-4A0A1B0GX49 114 aa13.76□□□□□ -0.21
EFCAB11-202ENST00000538485 VCYO14598 125 aa13.76□□□□□ -0.21
EFCAB11-202ENST00000538485 C11orf68Q9H3H3 251 aaKnown RBP13.76□□□□□ -0.21
EFCAB11-202ENST00000538485 TRBV10-1A0A0K0K1A3 114 aa13.75□□□□□ -0.21
EFCAB11-202ENST00000538485 LAGE3Q14657 143 aa13.75□□□□□ -0.21
EFCAB11-202ENST00000538485 DNAJC30Q96LL9 226 aa13.75□□□□□ -0.21
EFCAB11-202ENST00000538485 A0A0J9YWU9 116 aa13.74□□□□□ -0.21
EFCAB11-202ENST00000538485 HHLA3Q9XRX5 114 aa13.74□□□□□ -0.21
EFCAB11-202ENST00000538485 ZNRF2Q8NHG8 242 aa13.74□□□□□ -0.21
EFCAB11-202ENST00000538485 KIR2DL4Q99706 377 aa13.74□□□□□ -0.21
EFCAB11-202ENST00000538485 TRBV7-3A0A075B6L6 115 aa13.73□□□□□ -0.21
EFCAB11-202ENST00000538485 TEX48A0A1B0GUV7 120 aa13.73□□□□□ -0.21
EFCAB11-202ENST00000538485 K7EMI3 77 aa13.73□□□□□ -0.21
EFCAB11-202ENST00000538485 PRKDCP78527 4128 aaKnown RBP13.72□□□□□ -0.21
EFCAB11-202ENST00000538485 LOC100131303A0A0U1RQF7 123 aa13.72□□□□□ -0.21
EFCAB11-202ENST00000538485 I3L3M4 83 aa13.72□□□□□ -0.21
EFCAB11-202ENST00000538485 HBDP02042 147 aa13.72□□□□□ -0.21
EFCAB11-202ENST00000538485 C12orf74Q32Q52 190 aa13.72□□□□□ -0.21
EFCAB11-202ENST00000538485 LEPROTL1O95214 131 aa13.72□□□□□ -0.21
EFCAB11-202ENST00000538485 ATP5G1P05496 136 aa13.72□□□□□ -0.21
EFCAB11-202ENST00000538485 FCER1GP30273 86 aa13.72□□□□□ -0.21
EFCAB11-202ENST00000538485 RPL36AP83881 106 aaKnown RBP13.72□□□□□ -0.21
EFCAB11-202ENST00000538485 RHOHQ15669 191 aa13.72□□□□□ -0.21
EFCAB11-202ENST00000538485 RPL36ALQ969Q0 106 aaKnown RBP13.72□□□□□ -0.21
EFCAB11-202ENST00000538485 ORMDL2Q53FV1 153 aa13.71□□□□□ -0.21
EFCAB11-202ENST00000538485 LINC00173Q6ZV60 143 aa13.71□□□□□ -0.21
EFCAB11-202ENST00000538485 IGHV3-38A0A0C4DH36 116 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 GAGE12JA6NER3 117 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 NUDT3O95989 172 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 TSHBP01222 138 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 BTF3P20290 206 aaKnown RBP13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 CRYBA4P53673 196 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 GAGE1Q13065 139 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 GAGE4Q13068 117 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 GAGE5Q13069 117 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 GAGE13Q4V321 117 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 PHLDA1Q8WV24 401 aaPredicted RBP13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 PRO0255Q9UI72 69 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 STAB2Q8WWQ8 2551 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 PRADC1Q9BSG0 188 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 ZMAT4Q9H898 229 aa13.7□□□□□ -0.22
EFCAB11-202ENST00000538485 UBE2D3P61077 147 aa13.69□□□□□ -0.22
EFCAB11-202ENST00000538485 UBE2D2P62837 147 aa13.69□□□□□ -0.22
EFCAB11-202ENST00000538485 B9D2Q9BPU9 175 aa13.69□□□□□ -0.22
EFCAB11-202ENST00000538485 HTN3P15516 51 aa13.67□□□□□ -0.22
EFCAB11-202ENST00000538485 F5H768 121 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms