RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 PRADC1Q9BSG0 188 aa6.45□□□□□ -1.38
UBE3B-208ENST00000538070 GAGE12BA1L429 117 aa6.45□□□□□ -1.38
UBE3B-208ENST00000538070 RIPPLY3P57055 190 aa6.45□□□□□ -1.38
UBE3B-208ENST00000538070 NSUN5P1Q3KNT7 163 aa6.45□□□□□ -1.38
UBE3B-208ENST00000538070 ADAMTSL5Q6ZMM2 481 aa6.45□□□□□ -1.38
UBE3B-208ENST00000538070 ZFP2Q6ZN57 461 aa6.45□□□□□ -1.38
UBE3B-208ENST00000538070 IGHV4-4A0A075B6R2 117 aa6.45□□□□□ -1.38
UBE3B-208ENST00000538070 H7C2G1 150 aa6.45□□□□□ -1.38
UBE3B-208ENST00000538070 VCYO14598 125 aa6.45□□□□□ -1.38
UBE3B-208ENST00000538070 ADARB2-AS1A8MUL3 147 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 RBMY1A1P0DJD3 496 aaKnown RBP6.44□□□□□ -1.38
UBE3B-208ENST00000538070 RBMY1CP0DJD4 496 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 PLNP26678 52 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 RBMY1FQ15415 496 aaKnown RBP6.44□□□□□ -1.38
UBE3B-208ENST00000538070 C20orf78Q9BR46 151 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 ATRQ13535 2644 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 C11orf86A6NJI1 115 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 HLA-DRB4P13762 266 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 SAMD5Q5TGI4 173 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 AMTNQ6UX39 209 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 TOMM6Q96B49 74 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 HLA-DRB4X5D2U9 266 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 FABP2P12104 132 aa6.44□□□□□ -1.38
UBE3B-208ENST00000538070 RPL35AP18077 110 aaKnown RBP6.43□□□□□ -1.38
UBE3B-208ENST00000538070 SMR3AQ99954 134 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 C9orf118A6NHY6 69 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 SAP30O75446 220 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 CD28P10747 220 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 CR1P17927 2039 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 Q6ZSV7 163 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 GTF2H5Q6ZYL4 71 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 RAX2Q96IS3 184 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 FAM19A4Q96LR4 140 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 PEMTQ9UBM1 199 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 TNFRSF18Q9Y5U5 241 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 DNAJC9-AS1A6NH13 148 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 LINC00315P59091 139 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 FOXI2Q6ZQN5 318 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 PLEKHB2Q96CS7 222 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 WFDC10AQ9H1F0 79 aa6.43□□□□□ -1.38
UBE3B-208ENST00000538070 NEXN-AS1Q8NBZ9 246 aa6.42□□□□□ -1.38
UBE3B-208ENST00000538070 CST9LQ9H4G1 147 aa6.42□□□□□ -1.38
UBE3B-208ENST00000538070 H3BRM9 83 aa6.42□□□□□ -1.38
UBE3B-208ENST00000538070 PPP1R17O96001 155 aa6.42□□□□□ -1.38
UBE3B-208ENST00000538070 CRYGDP07320 174 aa6.42□□□□□ -1.38
UBE3B-208ENST00000538070 NPC2P61916 151 aa6.42□□□□□ -1.38
UBE3B-208ENST00000538070 STHQ8IWL8 128 aa6.42□□□□□ -1.38
UBE3B-208ENST00000538070 CITED2Q99967 270 aaPredicted RBP6.42□□□□□ -1.38
UBE3B-208ENST00000538070 SPXQ9BT56 116 aa6.42□□□□□ -1.38
UBE3B-208ENST00000538070 TRGV1A0A0A0MS02 117 aa6.41□□□□□ -1.38
UBE3B-208ENST00000538070 CEND1Q8N111 149 aa6.41□□□□□ -1.38
UBE3B-208ENST00000538070 SPAG8Q99932 426 aaPredicted RBP6.41□□□□□ -1.38
UBE3B-208ENST00000538070 KIF25-AS1Q9Y6Z4 181 aa6.41□□□□□ -1.38
UBE3B-208ENST00000538070 TRGV11A0A075B6L2 103 aa6.41□□□□□ -1.38
UBE3B-208ENST00000538070 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.41□□□□□ -1.38
UBE3B-208ENST00000538070 MYMXA0A1B0GTQ4 84 aa6.41□□□□□ -1.38
UBE3B-208ENST00000538070 IGKV2-29A2NJV5 120 aaPredicted RBP6.41□□□□□ -1.38
UBE3B-208ENST00000538070 RBMY1BA6NDE4 496 aaKnown RBP6.41□□□□□ -1.38
UBE3B-208ENST00000538070 RBMY1EA6NEQ0 496 aaKnown RBP6.41□□□□□ -1.38
UBE3B-208ENST00000538070 H3BMM0 161 aa6.41□□□□□ -1.38
UBE3B-208ENST00000538070 RBMY1DP0C7P1 496 aaKnown RBP6.41□□□□□ -1.38
UBE3B-208ENST00000538070 A0A0J9YXV3 536 aa6.41□□□□□ -1.38
UBE3B-208ENST00000538070 VCX2Q9H322 139 aa6.41□□□□□ -1.38
UBE3B-208ENST00000538070 ZMAT4Q9H898 229 aa6.41□□□□□ -1.38
UBE3B-208ENST00000538070 IGKV3OR2-268A0A0C4DH90 116 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 A0A0U1RRA0 63 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 M0QY20 66 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 TSHBP01222 138 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 HERVK_113P61574 105 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 PMVKQ15126 192 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 SAMD13Q5VXD3 122 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 MAP6D1Q9H9H5 199 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 ESM1Q9NQ30 184 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 A0A1W2PPM0 123 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 PRSS2P07478 247 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 AZU1P20160 251 aa6.4□□□□□ -1.38
UBE3B-208ENST00000538070 CCL24O00175 119 aa6.4□□□□□ -1.39
UBE3B-208ENST00000538070 LGALS3P17931 250 aaKnown RBP6.4□□□□□ -1.39
UBE3B-208ENST00000538070 POLR2KP53803 58 aaKnown RBP6.4□□□□□ -1.39
UBE3B-208ENST00000538070 DGAT2L7PQ6IED9 249 aa6.4□□□□□ -1.39
UBE3B-208ENST00000538070 TRPT1Q86TN4 253 aaKnown RBP6.4□□□□□ -1.39
UBE3B-208ENST00000538070 ZNF479Q96JC4 524 aa6.4□□□□□ -1.39
UBE3B-208ENST00000538070 ZNF580Q9UK33 172 aa6.4□□□□□ -1.39
UBE3B-208ENST00000538070 MORN3Q6PF18 240 aaPredicted RBP6.39□□□□□ -1.39
UBE3B-208ENST00000538070 Q6ZSN1 163 aa6.39□□□□□ -1.39
UBE3B-208ENST00000538070 KMT2BQ9UMN6 2715 aaPredicted RBP6.39□□□□□ -1.39
UBE3B-208ENST00000538070 SIVA1O15304 175 aa6.39□□□□□ -1.39
UBE3B-208ENST00000538070 BRI3O95415 125 aa6.39□□□□□ -1.39
UBE3B-208ENST00000538070 DEFB114Q30KQ6 69 aa6.39□□□□□ -1.39
UBE3B-208ENST00000538070 C9orf85Q96MD7 179 aa6.39□□□□□ -1.39
UBE3B-208ENST00000538070 TEP1Q99973 2627 aaKnown RBP6.39□□□□□ -1.39
UBE3B-208ENST00000538070 TRAV2A0A0B4J234 112 aa6.39□□□□□ -1.39
UBE3B-208ENST00000538070 H3BMG7 143 aa6.39□□□□□ -1.39
UBE3B-208ENST00000538070 MED14OSP0DP75 135 aa6.39□□□□□ -1.39
UBE3B-208ENST00000538070 C12orf74Q32Q52 190 aa6.39□□□□□ -1.39
UBE3B-208ENST00000538070 OCIAD2Q56VL3 154 aa6.39□□□□□ -1.39
UBE3B-208ENST00000538070 A8MZ25 164 aa6.38□□□□□ -1.39
UBE3B-208ENST00000538070 I3L3M4 83 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms