RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 S4R3C0 116 aa6.34□□□□□ -1.39
SRGAP1-202ENST00000537556 REV3LO60673 3130 aa6.34□□□□□ -1.4
SRGAP1-202ENST00000537556 EYSQ5T1H1 3165 aa6.34□□□□□ -1.4
SRGAP1-202ENST00000537556 NBR2O15453 112 aa6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 FP248Q71RG6 208 aaPredicted RBP6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 CNEP1R1Q8N9A8 125 aa6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 LINC00846Q9NV44 126 aa6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 PRRC2AP48634 2157 aaKnown RBP6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 LOXP28300 417 aaPredicted RBP6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 MSMPQ1L6U9 139 aa6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 OVOL2Q9BRP0 275 aa6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 SIRPDQ9H106 197 aa6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 ZNF580Q9UK33 172 aa6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 C22orf24Q9Y442 160 aa6.33□□□□□ -1.4
SRGAP1-202ENST00000537556 IGHV1-3A0A0C4DH29 117 aa6.32□□□□□ -1.4
SRGAP1-202ENST00000537556 TRBV6-5A0A0K0K1A5 114 aa6.32□□□□□ -1.4
SRGAP1-202ENST00000537556 H7BZZ5 65 aa6.32□□□□□ -1.4
SRGAP1-202ENST00000537556 AVPP01185 164 aa6.32□□□□□ -1.4
SRGAP1-202ENST00000537556 ATP5EP2Q5VTU8 51 aa6.32□□□□□ -1.4
SRGAP1-202ENST00000537556 DEFB127Q9H1M4 99 aa6.32□□□□□ -1.4
SRGAP1-202ENST00000537556 NDUFB3O43676 98 aa6.32□□□□□ -1.4
SRGAP1-202ENST00000537556 NXPH4O95158 308 aa6.32□□□□□ -1.4
SRGAP1-202ENST00000537556 CDSNQ15517 529 aa6.32□□□□□ -1.4
SRGAP1-202ENST00000537556 CUL9Q8IWT3 2517 aa6.32□□□□□ -1.4
SRGAP1-202ENST00000537556 RAI1Q7Z5J4 1906 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 IGLV11-55A0A075B6I3 123 aa6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 F5H697 171 aa6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 LINC01565O15544 149 aa6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 IGHV1-8P0DP01 117 aa6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 OPRPNQ99935 248 aaPredicted RBP6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 IGLV3-9A0A075B6K5 115 aa6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 BCE1O60756 84 aa6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 CCL4P13236 92 aa6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 SUMO4Q6EEV6 95 aa6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 MDS2Q8NDY4 140 aa6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 DEFB104AQ8WTQ1 72 aa6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 PLCE1Q9P212 2302 aa6.31□□□□□ -1.4
SRGAP1-202ENST00000537556 F8W735 103 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-202ENST00000537556 BUB1B-PAK6H3BSN5 160 aa6.3□□□□□ -1.4
SRGAP1-202ENST00000537556 IGHV1-46P01743 117 aa6.3□□□□□ -1.4
SRGAP1-202ENST00000537556 LY6G5BQ8NDX9 201 aa6.3□□□□□ -1.4
SRGAP1-202ENST00000537556 KIF25-AS1Q9Y6Z4 181 aa6.3□□□□□ -1.4
SRGAP1-202ENST00000537556 IGLV4-3A0A075B6K6 122 aa6.3□□□□□ -1.4
SRGAP1-202ENST00000537556 CTSGP08311 255 aa6.3□□□□□ -1.4
SRGAP1-202ENST00000537556 C20orf203Q8NBC4 194 aa6.3□□□□□ -1.4
SRGAP1-202ENST00000537556 ATP5EP56381 51 aaPredicted RBP6.3□□□□□ -1.4
SRGAP1-202ENST00000537556 LINC00315P59091 139 aa6.3□□□□□ -1.4
SRGAP1-202ENST00000537556 SPRR3Q9UBC9 169 aa6.3□□□□□ -1.4
SRGAP1-202ENST00000537556 BDP1A6H8Y1 2624 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 TRAV23DV6A0A075B6W5 121 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 SOCS3O14543 225 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 RNASE4P34096 147 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 NBL1P41271 181 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 C14orf132Q9NPU4 83 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 MALRD1Q5VYJ5 2156 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 LY6G6EA0A0G2JKS1 128 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 RBM3P98179 157 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 KLKP1Q107X0 134 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 Q8N2B8 174 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 LINC00308Q8TCZ7 52 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 SAP25Q8TEE9 199 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 RNASE6Q93091 150 aaKnown RBP6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 U3KQA8 63 aa6.29□□□□□ -1.4
SRGAP1-202ENST00000537556 TRAV7A0A075B6U4 112 aa6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 TRBV12-3P01733 135 aa6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 PMAIP1Q13794 54 aa6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 PRR9Q5T870 116 aa6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 VMO1Q7Z5L0 202 aa6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 TTC28Q96AY4 2481 aa6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 NCOR1O75376 2440 aa6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 NDUFC1O43677 76 aa6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 IGLV1-47P01700 117 aa6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 CCKP06307 115 aa6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 RPL28P46779 137 aaKnown RBP6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 LINC00482Q8N8I6 264 aa6.28□□□□□ -1.4
SRGAP1-202ENST00000537556 TRBV7-6A0A0J9YX20 115 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 TRBV10-3A0A0K0K1G6 114 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 M0R1B8 84 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 RNASE3P12724 160 aaKnown RBP6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 HIST2H2BCQ6DN03 193 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 HIST2H2BDQ6DRA6 164 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 IL17DQ8TAD2 202 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 OBSCN-AS1Q96MR7 158 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 Q9HAA7 133 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 IGHV3OR16-8A0A075B7F1 116 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 IGHV3-23P01764 117 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 PF4P02776 101 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 CD28P10747 220 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 RPL11P62913 178 aaKnown RBP6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 LYPD5Q6UWN5 251 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 APRG1Q8IVJ8 170 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 LAMTOR3Q9UHA4 124 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 NDUFA1O15239 70 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 FAM218AQ96MZ4 157 aa6.27□□□□□ -1.41
SRGAP1-202ENST00000537556 ZFAND2AQ8N6M9 145 aa6.26□□□□□ -1.41
SRGAP1-202ENST00000537556 PRSS33Q8NF86 280 aa6.26□□□□□ -1.41
SRGAP1-202ENST00000537556 A0A1W2PRX2 142 aa6.26□□□□□ -1.41
SRGAP1-202ENST00000537556 GNRH2O43555 120 aa6.26□□□□□ -1.41
SRGAP1-202ENST00000537556 HILS1P60008 231 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms