RNA–Protein interactions for RNA: ENST00000533818.5

CSDE1-215, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-215ENST00000533818 TSHBP01222 138 aa6.04□□□□□ -1.44
CSDE1-215ENST00000533818 ZNF56Q15929 161 aa6.04□□□□□ -1.44
CSDE1-215ENST00000533818 TMEM243Q9BU79 118 aa6.04□□□□□ -1.44
CSDE1-215ENST00000533818 B4DEV8 164 aa6.03□□□□□ -1.44
CSDE1-215ENST00000533818 NCS1P62166 190 aa6.03□□□□□ -1.44
CSDE1-215ENST00000533818 IAH1Q2TAA2 248 aaPredicted RBP6.03□□□□□ -1.44
CSDE1-215ENST00000533818 LINC00304Q8N9R0 145 aa6.03□□□□□ -1.44
CSDE1-215ENST00000533818 MCFD2Q8NI22 146 aa6.03□□□□□ -1.44
CSDE1-215ENST00000533818 NPCDR1Q9BY65 106 aa6.03□□□□□ -1.44
CSDE1-215ENST00000533818 MBD2Q9UBB5 411 aa6.03□□□□□ -1.44
CSDE1-215ENST00000533818 MACF1Q9UPN3 7388 aaKnown RBP6.03□□□□□ -1.44
CSDE1-215ENST00000533818 IGHV1-58A0A0C4DH39 117 aa6.02□□□□□ -1.45
CSDE1-215ENST00000533818 GRIFINA4D1Z8 144 aa6.02□□□□□ -1.45
CSDE1-215ENST00000533818 ZNF561-AS1K7EIQ3 104 aa6.02□□□□□ -1.45
CSDE1-215ENST00000533818 TPT1P13693 172 aaKnown RBP6.02□□□□□ -1.45
CSDE1-215ENST00000533818 S100A11P31949 105 aa6.02□□□□□ -1.45
CSDE1-215ENST00000533818 RPL18AQ02543 176 aaKnown RBP6.02□□□□□ -1.45
CSDE1-215ENST00000533818 FOXI1Q12951 378 aa6.02□□□□□ -1.45
CSDE1-215ENST00000533818 AP3S1Q92572 193 aa6.02□□□□□ -1.45
CSDE1-215ENST00000533818 PSG8Q9UQ74 426 aa6.02□□□□□ -1.45
CSDE1-215ENST00000533818 FABP5P3A8MUU1 101 aa6.01□□□□□ -1.45
CSDE1-215ENST00000533818 F5H697 171 aa6.01□□□□□ -1.45
CSDE1-215ENST00000533818 APOMO95445 188 aa6.01□□□□□ -1.45
CSDE1-215ENST00000533818 VBP1P61758 197 aa6.01□□□□□ -1.45
CSDE1-215ENST00000533818 KRTAP13-3Q3SY46 172 aa6.01□□□□□ -1.45
CSDE1-215ENST00000533818 DNLZQ5SXM8 178 aa6.01□□□□□ -1.45
CSDE1-215ENST00000533818 PRNTQ86SH4 94 aa6.01□□□□□ -1.45
CSDE1-215ENST00000533818 ZFP82Q8N141 532 aa6.01□□□□□ -1.45
CSDE1-215ENST00000533818 ISOC2Q96AB3 205 aa6.01□□□□□ -1.45
CSDE1-215ENST00000533818 SERTM2A0A1B0GWG4 89 aa6□□□□□ -1.45
CSDE1-215ENST00000533818 ZNF861PO60384 105 aa6□□□□□ -1.45
CSDE1-215ENST00000533818 CAMPP49913 170 aa6□□□□□ -1.45
CSDE1-215ENST00000533818 OR5C1Q8NGR4 320 aa6□□□□□ -1.45
CSDE1-215ENST00000533818 C9orf170A2RU37 121 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 KRBOX1C9JBD0 128 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-215ENST00000533818 K7EQM0 130 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 M0R036 132 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 UBE2L6O14933 153 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 SULT1A1P50225 295 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 UBE2BP63146 152 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 HBG1P69891 147 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 HBG2P69892 147 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 FLI1Q01543 452 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-215ENST00000533818 MEF2BQ02080 365 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-215ENST00000533818 IL18Q14116 193 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 ATP6V1FQ16864 119 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 KHDC3LQ587J8 217 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 SAPCD1Q5SSQ6 148 aa5.99□□□□□ -1.45
CSDE1-215ENST00000533818 SLC25A21Q9BQT8 299 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-215ENST00000533818 IGLV4-69A0A075B6H9 119 aa5.98□□□□□ -1.45
CSDE1-215ENST00000533818 FAM168BA1KXE4 195 aa5.98□□□□□ -1.45
CSDE1-215ENST00000533818 RGS5O15539 181 aa5.98□□□□□ -1.45
CSDE1-215ENST00000533818 XCL1P47992 114 aa5.98□□□□□ -1.45
CSDE1-215ENST00000533818 TAS2R45P59539 299 aa5.98□□□□□ -1.45
CSDE1-215ENST00000533818 KRTAP19-1Q8IUB9 90 aa5.98□□□□□ -1.45
CSDE1-215ENST00000533818 THAP6Q8TBB0 222 aa5.98□□□□□ -1.45
CSDE1-215ENST00000533818 RAB26Q9ULW5 256 aa5.98□□□□□ -1.45
CSDE1-215ENST00000533818 LSM5Q9Y4Y9 91 aaKnown RBP5.98□□□□□ -1.45
CSDE1-215ENST00000533818 TCRAP04437 139 aa5.97□□□□□ -1.45
CSDE1-215ENST00000533818 FAUP35544 74 aaKnown RBP5.97□□□□□ -1.45
CSDE1-215ENST00000533818 KRTAP13-2Q52LG2 175 aa5.97□□□□□ -1.45
CSDE1-215ENST00000533818 NUP35Q8NFH5 326 aa5.97□□□□□ -1.45
CSDE1-215ENST00000533818 VCX3BQ9H321 246 aa5.97□□□□□ -1.45
CSDE1-215ENST00000533818 ANAPC11Q9NYG5 84 aa5.97□□□□□ -1.45
CSDE1-215ENST00000533818 FLVCR2Q9UPI3 526 aa5.97□□□□□ -1.45
CSDE1-215ENST00000533818 KRTAP4-16G5E9R7 235 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-215ENST00000533818 H3BMQ9 156 aa5.96□□□□□ -1.46
CSDE1-215ENST00000533818 TMBIM6P55061 237 aa5.96□□□□□ -1.46
CSDE1-215ENST00000533818 CTAG1AP78358 180 aa5.96□□□□□ -1.46
CSDE1-215ENST00000533818 FP248Q71RG6 208 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-215ENST00000533818 FAM19A5Q7Z5A7 132 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-215ENST00000533818 STX12Q86Y82 276 aa5.96□□□□□ -1.46
CSDE1-215ENST00000533818 OR5A1Q8NGJ0 315 aa5.96□□□□□ -1.46
CSDE1-215ENST00000533818 OPRPNQ99935 248 aaPredicted RBP5.96□□□□□ -1.46
CSDE1-215ENST00000533818 MRPS26Q9BYN8 205 aaKnown RBP5.96□□□□□ -1.46
CSDE1-215ENST00000533818 IGSF23A1L1A6 192 aa5.95□□□□□ -1.46
CSDE1-215ENST00000533818 CTDSP2O14595 271 aa5.95□□□□□ -1.46
CSDE1-215ENST00000533818 RPL12P30050 165 aaKnown RBP5.95□□□□□ -1.46
CSDE1-215ENST00000533818 RNF151Q2KHN1 245 aa5.95□□□□□ -1.46
CSDE1-215ENST00000533818 TMEM252Q8N6L7 170 aa5.95□□□□□ -1.46
CSDE1-215ENST00000533818 C5orf17Q8NAS9 161 aa5.95□□□□□ -1.46
CSDE1-215ENST00000533818 CAMK2N2Q96S95 79 aa5.95□□□□□ -1.46
CSDE1-215ENST00000533818 C11orf1Q9H5F2 150 aa5.95□□□□□ -1.46
CSDE1-215ENST00000533818 KCNIP2Q9NS61 270 aa5.95□□□□□ -1.46
CSDE1-215ENST00000533818 TMSB15BA0A087X1C1 80 aa5.94□□□□□ -1.46
CSDE1-215ENST00000533818 SS18Q15532 418 aa5.94□□□□□ -1.46
CSDE1-215ENST00000533818 RSL24D1Q9UHA3 163 aaKnown RBP5.94□□□□□ -1.46
CSDE1-215ENST00000533818 CCL25O15444 150 aa5.93□□□□□ -1.46
CSDE1-215ENST00000533818 PVALBP20472 110 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-215ENST00000533818 MED28Q9H204 178 aa5.93□□□□□ -1.46
CSDE1-215ENST00000533818 WFDC1Q9HC57 220 aa5.93□□□□□ -1.46
CSDE1-215ENST00000533818 A0A1B0GVG6 124 aa5.92□□□□□ -1.46
CSDE1-215ENST00000533818 M0QXV9 152 aa5.92□□□□□ -1.46
CSDE1-215ENST00000533818 CRIP1P50238 77 aa5.92□□□□□ -1.46
CSDE1-215ENST00000533818 AMMECR1LQ6DCA0 310 aa5.92□□□□□ -1.46
CSDE1-215ENST00000533818 FUNDC2Q9BWH2 189 aa5.92□□□□□ -1.46
CSDE1-215ENST00000533818 ZNF471Q9BX82 626 aaPredicted RBP5.92□□□□□ -1.46
CSDE1-215ENST00000533818 C19orf71A6NCJ1 209 aa5.91□□□□□ -1.46
CSDE1-215ENST00000533818 A6NHS1 94 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms