RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 FABP9Q0Z7S8 132 aa17.31■□□□□ 0.36
ME3-209ENST00000530520 ZFAND6Q6FIF0 208 aa17.31■□□□□ 0.36
ME3-209ENST00000530520 GAGE12JA6NER3 117 aa17.3■□□□□ 0.36
ME3-209ENST00000530520 H3BNG1 76 aa17.3■□□□□ 0.36
ME3-209ENST00000530520 PPBPP02775 128 aa17.3■□□□□ 0.36
ME3-209ENST00000530520 GAGE1Q13065 139 aa17.3■□□□□ 0.36
ME3-209ENST00000530520 GAGE4Q13068 117 aa17.3■□□□□ 0.36
ME3-209ENST00000530520 GAGE5Q13069 117 aa17.3■□□□□ 0.36
ME3-209ENST00000530520 KIAA1644Q3SXP7 199 aa17.3■□□□□ 0.36
ME3-209ENST00000530520 GAGE13Q4V321 117 aa17.3■□□□□ 0.36
ME3-209ENST00000530520 ORMDL3Q8N138 153 aa17.3■□□□□ 0.36
ME3-209ENST00000530520 NEXN-AS1Q8NBZ9 246 aa17.3■□□□□ 0.36
ME3-209ENST00000530520 RPL39LQ96EH5 51 aaKnown RBP17.3■□□□□ 0.36
ME3-209ENST00000530520 RPL36AP83881 106 aaKnown RBP17.29■□□□□ 0.36
ME3-209ENST00000530520 OR10J3Q5JRS4 329 aa17.29■□□□□ 0.36
ME3-209ENST00000530520 RPL36ALQ969Q0 106 aaKnown RBP17.29■□□□□ 0.36
ME3-209ENST00000530520 NIT2Q9NQR4 276 aa17.29■□□□□ 0.36
ME3-209ENST00000530520 KLK5Q9Y337 293 aaPredicted RBP17.29■□□□□ 0.36
ME3-209ENST00000530520 ICOSQ9Y6W8 199 aa17.29■□□□□ 0.36
ME3-209ENST00000530520 ZNRF2Q8NHG8 242 aa17.28■□□□□ 0.36
ME3-209ENST00000530520 TNFRSF18Q9Y5U5 241 aa17.28■□□□□ 0.36
ME3-209ENST00000530520 NUDT3O95989 172 aa17.28■□□□□ 0.36
ME3-209ENST00000530520 SREK1IP1Q8N9Q2 155 aaPredicted RBP17.28■□□□□ 0.36
ME3-209ENST00000530520 TRBV7-3A0A075B6L6 115 aa17.27■□□□□ 0.35
ME3-209ENST00000530520 PPP1R17O96001 155 aa17.27■□□□□ 0.35
ME3-209ENST00000530520 C15orf53Q8NAA6 179 aa17.27■□□□□ 0.35
ME3-209ENST00000530520 DNAJC30Q96LL9 226 aa17.27■□□□□ 0.35
ME3-209ENST00000530520 PRELID3AQ96N28 172 aa17.27■□□□□ 0.35
ME3-209ENST00000530520 SRIP30626 198 aa17.26■□□□□ 0.35
ME3-209ENST00000530520 MRPL23Q16540 153 aaKnown RBP17.26■□□□□ 0.35
ME3-209ENST00000530520 NRACQ8N912 160 aa17.25■□□□□ 0.35
ME3-209ENST00000530520 A0A096LPF7 62 aa17.24■□□□□ 0.35
ME3-209ENST00000530520 NPYP01303 97 aa17.24■□□□□ 0.35
ME3-209ENST00000530520 TNFRSF6BO95407 300 aa17.23■□□□□ 0.35
ME3-209ENST00000530520 ST20Q9HBF5 79 aa17.23■□□□□ 0.35
ME3-209ENST00000530520 DNAH7Q8WXX0 4024 aa17.23■□□□□ 0.35
ME3-209ENST00000530520 TRGC2P03986 189 aa17.23■□□□□ 0.35
ME3-209ENST00000530520 LINC00694P0DN24 101 aa17.22■□□□□ 0.35
ME3-209ENST00000530520 UBE2D3P61077 147 aa17.22■□□□□ 0.35
ME3-209ENST00000530520 UBE2D2P62837 147 aa17.22■□□□□ 0.35
ME3-209ENST00000530520 LAMTOR2Q9Y2Q5 125 aa17.22■□□□□ 0.35
ME3-209ENST00000530520 TRBV6-5A0A0K0K1A5 114 aa17.21■□□□□ 0.35
ME3-209ENST00000530520 PHOX2AO14813 284 aa17.21■□□□□ 0.35
ME3-209ENST00000530520 SH2D6Q7Z4S9 175 aa17.21■□□□□ 0.35
ME3-209ENST00000530520 ATP6V0E2Q8NHE4 81 aa17.21■□□□□ 0.35
ME3-209ENST00000530520 SDHAF1A6NFY7 115 aa17.2■□□□□ 0.34
ME3-209ENST00000530520 SUMO2P61956 95 aaKnown RBP17.2■□□□□ 0.34
ME3-209ENST00000530520 NEGR1Q7Z3B1 354 aa17.2■□□□□ 0.34
ME3-209ENST00000530520 ALKBH7Q9BT30 221 aaPredicted RBP17.2■□□□□ 0.34
ME3-209ENST00000530520 IGHV3-38A0A0C4DH36 116 aa17.19■□□□□ 0.34
ME3-209ENST00000530520 C3orf84H3BNL1 204 aa17.19■□□□□ 0.34
ME3-209ENST00000530520 C20orf78Q9BR46 151 aa17.19■□□□□ 0.34
ME3-209ENST00000530520 DAZ4Q86SG3 579 aaKnown RBP17.18■□□□□ 0.34
ME3-209ENST00000530520 TMEM70Q9BUB7 260 aa17.18■□□□□ 0.34
ME3-209ENST00000530520 MAP1LC3AQ9H492 121 aa17.18■□□□□ 0.34
ME3-209ENST00000530520 DAZ3Q9NR90 486 aaKnown RBP17.18■□□□□ 0.34
ME3-209ENST00000530520 APLNQ9ULZ1 77 aa17.18■□□□□ 0.34
ME3-209ENST00000530520 TCTAP57738 103 aa17.17■□□□□ 0.34
ME3-209ENST00000530520 CSMD3Q7Z407 3707 aa17.15■□□□□ 0.34
ME3-209ENST00000530520 CASC10Q5T4H9 136 aa17.15■□□□□ 0.34
ME3-209ENST00000530520 LOC389332A0A1B0GUA5 103 aa17.15■□□□□ 0.34
ME3-209ENST00000530520 POLR2KP53803 58 aaKnown RBP17.15■□□□□ 0.34
ME3-209ENST00000530520 SMIM2Q9BVW6 85 aa17.15■□□□□ 0.34
ME3-209ENST00000530520 PMCHP20382 165 aa17.14■□□□□ 0.33
ME3-209ENST00000530520 DEFB104AQ8WTQ1 72 aa17.14■□□□□ 0.33
ME3-209ENST00000530520 GTSF1LQ9H1H1 148 aa17.14■□□□□ 0.33
ME3-209ENST00000530520 TRBV27A0A0K0K1C4 114 aa17.13■□□□□ 0.33
ME3-209ENST00000530520 I3L3M4 83 aa17.13■□□□□ 0.33
ME3-209ENST00000530520 VCYO14598 125 aa17.13■□□□□ 0.33
ME3-209ENST00000530520 RPL32P62910 135 aaKnown RBP17.12■□□□□ 0.33
ME3-209ENST00000530520 COTL1Q14019 142 aa17.11■□□□□ 0.33
ME3-209ENST00000530520 LYPD5Q6UWN5 251 aa17.11■□□□□ 0.33
ME3-209ENST00000530520 PRSS47A8MTI9 375 aa17.11■□□□□ 0.33
ME3-209ENST00000530520 IQCJQ1A5X6 159 aa17.11■□□□□ 0.33
ME3-209ENST00000530520 C18orf32Q8TCD1 76 aa17.11■□□□□ 0.33
ME3-209ENST00000530520 KIR2DL4Q99706 377 aa17.11■□□□□ 0.33
ME3-209ENST00000530520 ESRGQ1W209 222 aa17.1■□□□□ 0.33
ME3-209ENST00000530520 TENM2Q9NT68 2774 aa17.09■□□□□ 0.33
ME3-209ENST00000530520 STARD9Q9P2P6 4700 aa17.09■□□□□ 0.33
ME3-209ENST00000530520 CCL18P55774 89 aa17.09■□□□□ 0.33
ME3-209ENST00000530520 TMEM97Q5BJF2 176 aa17.09■□□□□ 0.33
ME3-209ENST00000530520 FCER1GP30273 86 aa17.08■□□□□ 0.32
ME3-209ENST00000530520 IFI27P40305 119 aaPredicted RBP17.08■□□□□ 0.32
ME3-209ENST00000530520 Q8N8P6 123 aa17.08■□□□□ 0.32
ME3-209ENST00000530520 PRSS3P2Q8NHM4 247 aa17.08■□□□□ 0.32
ME3-209ENST00000530520 NXT2Q9NPJ8 142 aaKnown RBP17.08■□□□□ 0.32
ME3-209ENST00000530520 TSHBP01222 138 aa17.07■□□□□ 0.32
ME3-209ENST00000530520 TIRAPP58753 221 aa17.07■□□□□ 0.32
ME3-209ENST00000530520 DYNC2H1Q8NCM8 4307 aaKnown RBP17.07■□□□□ 0.32
ME3-209ENST00000530520 IGLV2-18A0A075B6J9 118 aa17.06■□□□□ 0.32
ME3-209ENST00000530520 NTM-AS1Q6ZSK4 140 aa17.06■□□□□ 0.32
ME3-209ENST00000530520 TRBV6-8A0A0A6YYG3 113 aa17.06■□□□□ 0.32
ME3-209ENST00000530520 C1orf196B1AJZ1 125 aa17.06■□□□□ 0.32
ME3-209ENST00000530520 TCAPO15273 167 aa17.05■□□□□ 0.32
ME3-209ENST00000530520 AMTP48728 403 aa17.05■□□□□ 0.32
ME3-209ENST00000530520 LELP1Q5T871 98 aa17.05■□□□□ 0.32
ME3-209ENST00000530520 UBE2DNLQ8IWF7 75 aa17.05■□□□□ 0.32
ME3-209ENST00000530520 TRBV25-1A0A075B6N4 114 aa17.04■□□□□ 0.32
ME3-209ENST00000530520 IGHV1-24A0A0C4DH33 117 aa17.04■□□□□ 0.32
ME3-209ENST00000530520 LINC00588Q9Y4M8 146 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms