RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 LEPROTO15243 131 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 ERC2-IT1O76042 136 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 DNAL4O96015 105 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 IGHV4-34P06331 123 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 BLCAPP62952 87 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 ZNF876PQ49A33 203 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 C2orf83Q53S99 150 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 SPINK9Q5DT21 86 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 C10orf128Q5T292 105 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 MUSTN1Q8IVN3 82 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 KLF14Q8TD94 323 aaPredicted RBP2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 CLEC2BQ92478 149 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 IMMP1LQ96LU5 166 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 SPRR3Q9UBC9 169 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 CTSZQ9UBR2 303 aa2.67□□□□□ -1.98
CLNS1A-209ENST00000527299 CACNA1DQ01668 2161 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 IGKV1D-17A0A075B6S4 117 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 IGKV1OR2-108A0A075B7D4 117 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 A0A087WVE0 104 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 IGHV1-69DA0A0B4J2H0 117 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 IGHV5-51A0A0C4DH38 117 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 J3QT63 122 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 COX7A2LO14548 114 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 MIFP14174 115 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 RPL28P46779 137 aaKnown RBP2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 ZNF80P51504 273 aaPredicted RBP2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 DEFB134Q4QY38 66 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 C14orf178Q8N769 122 aaPredicted RBP2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 THAP8Q8NA92 274 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 KLHL30-AS1Q8NEE0 82 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 DYNLRB2Q8TF09 96 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 COX14Q96I36 57 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 OBSCN-AS1Q96MR7 158 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 SCGB3A1Q96QR1 104 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 TIMM17AQ99595 171 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 TMEM14BQ9NUH8 114 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 TMEM14CQ9P0S9 112 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 C22orf24Q9Y442 160 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 SMAD5-AS1Q9Y6J3 95 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 UTRNP46939 3433 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 DSCAMO60469 2012 aa2.66□□□□□ -1.98
CLNS1A-209ENST00000527299 IGLV4-69A0A075B6H9 119 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 IGLV5-52A0A0A0MRZ9 124 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 A0A0J9YXY3 114 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 M0R3E3 92 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 SH2D1AO60880 128 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 CLPSP04118 112 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 BAALC-AS2P0C853 105 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 RNASE4P34096 147 aaKnown RBP2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 TSPEAR-AS2P59090 65 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 FAM229BQ4G0N7 80 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 C14orf177Q52M58 125 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 CLLU1OSQ5K130 101 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 PATE2Q6UY27 113 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 PRNTQ86SH4 94 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 TMEM61Q8N0U2 210 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 LYPD1Q8N2G4 141 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 OPRPNQ99935 248 aaPredicted RBP2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 OVOL2Q9BRP0 275 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 SMIM2Q9BVW6 85 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 BPESC1Q9GZL8 116 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 Q9H8V8 135 aa2.65□□□□□ -1.99
CLNS1A-209ENST00000527299 ARHGAP32A7KAX9 2087 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 ZNF407Q9C0G0 2248 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 IGHV5-10-1A0A0J9YXX1 117 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 PCNX2A6NKB5 2137 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 A8MUN3 132 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 TRBV12-3P01733 135 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 CD28P10747 220 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 GNLYP22749 145 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 CRIP1P50238 77 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 PRCDQ00LT1 54 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 NNATQ16517 81 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 ADAMTSL4-AS1Q5T5F5 129 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 SOSTDC1Q6X4U4 206 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 ATP11AUNQ6ZP68 121 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 C7orf65Q6ZTY9 151 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 C17orf82Q86X59 251 aaPredicted RBP2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 KRTAP7-1Q8IUC3 87 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 CCL17Q92583 94 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 RMI2Q96E14 147 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 TMEM141Q96I45 108 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 CXXC4Q9H2H0 198 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 LINC00846Q9NV44 126 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 PHLDA3Q9Y5J5 127 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 FREM1Q5H8C1 2179 aa2.64□□□□□ -1.99
CLNS1A-209ENST00000527299 TRAV23DV6A0A075B6W5 121 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 IGHV1-45A0A0A0MS14 117 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 TRBV7-4A0A0J9YYF1 115 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 A6NN06 94 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 M0R1W7 72 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 VCYO14598 125 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 CD70P32970 193 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 MIAQ16674 131 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 TMEM30BQ3MIR4 351 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 KRTAP13-3Q3SY46 172 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 FAM27BQ5VT28 67 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 C2orf66Q6UXQ4 117 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 DIRC1Q969H9 104 aa2.63□□□□□ -1.99
CLNS1A-209ENST00000527299 LITAFQ99732 161 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms