RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	PLXNB1	O43157	2135 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	IGLV3-32	A0A0A0MS00	114 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	MEIS3P1	A6NDR6	274 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	GGT3P	A6NGU5	568 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	TMEM212	A6NML5	194 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356		A8MUU9	505 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356		H3BMM0	161 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	TMEM256-PLSCR3	K7ERE1	68 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	NAPSA	O96009	420 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	LHB	P01229	141 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	IGLC6	P0CF74	106 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	LINC00694	P0DN24	101 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	GZMB	P10144	247 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	FABP2	P12104	132 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	AKR1C1	Q04828	323 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	IQCJ	Q1A5X6	159 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	LGALSL	Q3ZCW2	172 aa	Predicted RBP	2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	KHDC3L	Q587J8	217 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	SPRN	Q5BIV9	151 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	XAF1	Q6GPH4	301 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	EIF5AL1	Q6IS14	154 aa	Known RBP	2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	SLC48A1	Q6P1K1	146 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	ZNF322	Q6U7Q0	402 aa	Predicted RBP	2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	RPS27L	Q71UM5	84 aa	Known RBP	2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	LINC00305	Q7Z4B0	112 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	KRTAP11-1	Q8IUC1	163 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	UBE2W	Q96B02	151 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	YPEL2	Q96QA6	119 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	MRPL57	Q9BQC6	102 aa	Known RBP	2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	SEC11C	Q9BY50	192 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	TAF9B	Q9HBM6	251 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	OR5V1	Q9UGF6	321 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356		U3KQK5	164 aa		2.69	□□□□□ -1.98
PCM1-223	ENST00000524356	LOC100130705	A0A1B0GUX0	176 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	ODAM	A1E959	279 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	GRIFIN	A4D1Z8	144 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356		K7EIL1	84 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	ZNF19	P17023	458 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	HLA-DMB	P28068	263 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	MPV17	P39210	176 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	S100A10	P60903	97 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	UBE2B	P63146	152 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	FOXF1	Q12946	379 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	PHF5A	Q7RTV0	110 aa	Known RBP	2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	TCTEX1D1	Q8N7M0	179 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	DEFB108B	Q8NET1	73 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	MIEN1	Q9BRT3	115 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	GINS4	Q9BRT9	223 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	MRPL32	Q9BYC8	188 aa	Known RBP	2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	TRAPPC1	Q9Y5R8	145 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	ICOS	Q9Y6W8	199 aa		2.68	□□□□□ -1.98
PCM1-223	ENST00000524356	STAB2	Q8WWQ8	2551 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	DOCK11	Q5JSL3	2073 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	IGKV1OR2-108	A0A075B7D4	117 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	IGKV1-9	A0A0C4DH69	117 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	C19orf71	A6NCJ1	209 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	GGTLC3	B5MD39	225 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356		H3BMG7	143 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	NPFF	O15130	113 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	NCR2	O95944	276 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	IGHV1-69	P01742	117 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	ADCYAP1	P18509	176 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	GNG4	P50150	75 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	DYNLT3	P51808	116 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	HBB	P68871	147 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	ZNF141	Q15928	474 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	DEFB112	Q30KQ8	113 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	ALKAL2	Q6UX46	152 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	ZFP2	Q6ZN57	461 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	COMMD6	Q7Z4G1	85 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	SAXO1	Q8IYX7	474 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	C3orf22	Q8N5N4	141 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	TTTY13	Q9BZ97	58 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	C16orf95	Q9H693	158 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	OSTC	Q9NRP0	149 aa		2.67	□□□□□ -1.98
PCM1-223	ENST00000524356	KIAA1109	Q2LD37	5005 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	TRAV13-1	A0A0B4J241	112 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	CLPSL1	A2RUU4	121 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	C7orf66	A4D0T2	115 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	CTSD	P07339	412 aa	Predicted RBP	2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	CXCL1	P09341	107 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	RNASE4	P34096	147 aa	Known RBP	2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	ZNF117	Q03924	483 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	HSD52	Q0P140	79 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	KISS1	Q15726	138 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	ZNF705A	Q6ZN79	300 aa	Predicted RBP	2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	SDIM1	Q6ZPB5	146 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	MIR17HG	Q75NE6	70 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	BPIFA4P	Q86YQ2	179 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	C5orf17	Q8NAS9	161 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	HIST1H2BL	Q99880	126 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	ADAT1	Q9BUB4	502 aa	Known RBP	2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	SMDT1	Q9H4I9	107 aa		2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	HUWE1	Q7Z6Z7	4374 aa	Known RBP	2.66	□□□□□ -1.98
PCM1-223	ENST00000524356	IGHV3-73	A0A0B4J1V6	119 aa		2.65	□□□□□ -1.99
PCM1-223	ENST00000524356		A0A0B4J2C4	111 aa		2.65	□□□□□ -1.99
PCM1-223	ENST00000524356	NPY	P01303	97 aa		2.65	□□□□□ -1.99
PCM1-223	ENST00000524356	IGHV3-7	P01780	117 aa		2.65	□□□□□ -1.99
PCM1-223	ENST00000524356	IGKV1-16	P04430	117 aa		2.65	□□□□□ -1.99

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms