RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 SCGB1D2O95969 90 aa7.4□□□□□ -1.22
SMAD1-216ENST00000515527 MEF2BQ02080 365 aaPredicted RBP7.4□□□□□ -1.22
SMAD1-216ENST00000515527 SMUG1Q53HV7 270 aa7.4□□□□□ -1.22
SMAD1-216ENST00000515527 FAM74A1Q5RGS3 127 aa7.4□□□□□ -1.22
SMAD1-216ENST00000515527 OPRPNQ99935 248 aaPredicted RBP7.4□□□□□ -1.22
SMAD1-216ENST00000515527 LINC00846Q9NV44 126 aa7.4□□□□□ -1.22
SMAD1-216ENST00000515527 PSG8Q9UQ74 426 aa7.4□□□□□ -1.22
SMAD1-216ENST00000515527 UBE2L6O14933 153 aa7.39□□□□□ -1.23
SMAD1-216ENST00000515527 TAS2R30P59541 319 aa7.39□□□□□ -1.23
SMAD1-216ENST00000515527 OTORQ9NRC9 128 aa7.39□□□□□ -1.23
SMAD1-216ENST00000515527 IGLV4-69A0A075B6H9 119 aa7.38□□□□□ -1.23
SMAD1-216ENST00000515527 GNG5P63218 68 aa7.38□□□□□ -1.23
SMAD1-216ENST00000515527 RNF151Q2KHN1 245 aa7.38□□□□□ -1.23
SMAD1-216ENST00000515527 TMEM128Q5BJH2 165 aa7.38□□□□□ -1.23
SMAD1-216ENST00000515527 NUP35Q8NFH5 326 aa7.38□□□□□ -1.23
SMAD1-216ENST00000515527 WFDC1Q9HC57 220 aa7.38□□□□□ -1.23
SMAD1-216ENST00000515527 IGLV8-61A0A075B6I0 122 aa7.37□□□□□ -1.23
SMAD1-216ENST00000515527 F5H697 171 aa7.37□□□□□ -1.23
SMAD1-216ENST00000515527 FGF7P21781 194 aa7.37□□□□□ -1.23
SMAD1-216ENST00000515527 AQP4P55087 323 aa7.37□□□□□ -1.23
SMAD1-216ENST00000515527 SSBP1Q04837 148 aaKnown RBP7.37□□□□□ -1.23
SMAD1-216ENST00000515527 C4orf48Q5BLP8 95 aa7.37□□□□□ -1.23
SMAD1-216ENST00000515527 MCUBQ9NWR8 336 aa7.37□□□□□ -1.23
SMAD1-216ENST00000515527 EXTL2Q9UBQ6 330 aa7.37□□□□□ -1.23
SMAD1-216ENST00000515527 B4DEV8 164 aa7.36□□□□□ -1.23
SMAD1-216ENST00000515527 TPT1P13693 172 aaKnown RBP7.36□□□□□ -1.23
SMAD1-216ENST00000515527 XCL1P47992 114 aa7.36□□□□□ -1.23
SMAD1-216ENST00000515527 C15orf40Q8WUR7 153 aa7.36□□□□□ -1.23
SMAD1-216ENST00000515527 CAMK2N2Q96S95 79 aa7.36□□□□□ -1.23
SMAD1-216ENST00000515527 M0QXV9 152 aa7.35□□□□□ -1.23
SMAD1-216ENST00000515527 CST7O76096 145 aa7.35□□□□□ -1.23
SMAD1-216ENST00000515527 SMCPP49901 116 aaPredicted RBP7.35□□□□□ -1.23
SMAD1-216ENST00000515527 LSM3P62310 102 aaKnown RBP7.35□□□□□ -1.23
SMAD1-216ENST00000515527 XP32Q5T750 250 aa7.35□□□□□ -1.23
SMAD1-216ENST00000515527 ZFP82Q8N141 532 aa7.35□□□□□ -1.23
SMAD1-216ENST00000515527 FLVCR2Q9UPI3 526 aa7.35□□□□□ -1.23
SMAD1-216ENST00000515527 GRIFINA4D1Z8 144 aa7.34□□□□□ -1.23
SMAD1-216ENST00000515527 CNBD2Q96M20 576 aa7.34□□□□□ -1.23
SMAD1-216ENST00000515527 MUC12Q9UKN1 5478 aa7.34□□□□□ -1.24
SMAD1-216ENST00000515527 IGKV2D-26A0A0A0MRZ7 120 aa7.33□□□□□ -1.24
SMAD1-216ENST00000515527 C7orf66A4D0T2 115 aa7.33□□□□□ -1.24
SMAD1-216ENST00000515527 SFT2D2O95562 160 aa7.33□□□□□ -1.24
SMAD1-216ENST00000515527 BCAP31P51572 246 aa7.33□□□□□ -1.24
SMAD1-216ENST00000515527 OR5A1Q8NGJ0 315 aa7.33□□□□□ -1.24
SMAD1-216ENST00000515527 OR5C1Q8NGR4 320 aa7.33□□□□□ -1.24
SMAD1-216ENST00000515527 KIR2DL4Q99706 377 aa7.33□□□□□ -1.24
SMAD1-216ENST00000515527 UBE2D4Q9Y2X8 147 aa7.33□□□□□ -1.24
SMAD1-216ENST00000515527 L7N2F9 121 aa7.32□□□□□ -1.24
SMAD1-216ENST00000515527 VAMP2P63027 116 aa7.32□□□□□ -1.24
SMAD1-216ENST00000515527 PPP1R1AQ13522 171 aa7.32□□□□□ -1.24
SMAD1-216ENST00000515527 PRNTQ86SH4 94 aa7.32□□□□□ -1.24
SMAD1-216ENST00000515527 DAND5Q8N907 189 aa7.32□□□□□ -1.24
SMAD1-216ENST00000515527 C19orf71A6NCJ1 209 aa7.31□□□□□ -1.24
SMAD1-216ENST00000515527 FABP5P3A8MUU1 101 aa7.31□□□□□ -1.24
SMAD1-216ENST00000515527 M0R036 132 aa7.31□□□□□ -1.24
SMAD1-216ENST00000515527 CCL25O15444 150 aa7.31□□□□□ -1.24
SMAD1-216ENST00000515527 NPCDR1Q9BY65 106 aa7.31□□□□□ -1.24
SMAD1-216ENST00000515527 MBD2Q9UBB5 411 aa7.31□□□□□ -1.24
SMAD1-216ENST00000515527 RPL28P46779 137 aaKnown RBP7.3□□□□□ -1.24
SMAD1-216ENST00000515527 IAH1Q2TAA2 248 aaPredicted RBP7.3□□□□□ -1.24
SMAD1-216ENST00000515527 PCOTHQ58A44 107 aa7.3□□□□□ -1.24
SMAD1-216ENST00000515527 DNLZQ5SXM8 178 aa7.3□□□□□ -1.24
SMAD1-216ENST00000515527 MZT2AQ6P582 158 aa7.3□□□□□ -1.24
SMAD1-216ENST00000515527 K7EQM0 130 aa7.29□□□□□ -1.24
SMAD1-216ENST00000515527 MRPS10P82664 201 aaKnown RBP7.29□□□□□ -1.24
SMAD1-216ENST00000515527 FLI1Q01543 452 aaPredicted RBP7.29□□□□□ -1.24
SMAD1-216ENST00000515527 CTDSP1Q9GZU7 261 aa7.29□□□□□ -1.24
SMAD1-216ENST00000515527 GSKIPQ9P0R6 139 aa7.29□□□□□ -1.24
SMAD1-216ENST00000515527 SERTM2A0A1B0GWG4 89 aa7.28□□□□□ -1.24
SMAD1-216ENST00000515527 KRBOX1C9JBD0 128 aa7.28□□□□□ -1.24
SMAD1-216ENST00000515527 NUPR1O60356 82 aa7.28□□□□□ -1.24
SMAD1-216ENST00000515527 FAM229BQ4G0N7 80 aa7.28□□□□□ -1.24
SMAD1-216ENST00000515527 KHDC3LQ587J8 217 aa7.28□□□□□ -1.24
SMAD1-216ENST00000515527 LINC00242Q5T6M2 205 aa7.28□□□□□ -1.24
SMAD1-216ENST00000515527 AMMECR1LQ6DCA0 310 aa7.28□□□□□ -1.24
SMAD1-216ENST00000515527 SMIM4Q8WVI0 70 aa7.28□□□□□ -1.24
SMAD1-216ENST00000515527 ANKRD20A5PA0PJZ0 165 aa7.27□□□□□ -1.25
SMAD1-216ENST00000515527 H3BMQ9 156 aa7.27□□□□□ -1.25
SMAD1-216ENST00000515527 BCL2L11O43521 198 aa7.27□□□□□ -1.25
SMAD1-216ENST00000515527 TNFRSF6BO95407 300 aa7.27□□□□□ -1.25
SMAD1-216ENST00000515527 S100A11P31949 105 aa7.27□□□□□ -1.25
SMAD1-216ENST00000515527 TMBIM6P55061 237 aa7.27□□□□□ -1.25
SMAD1-216ENST00000515527 SAPCD1Q5SSQ6 148 aa7.27□□□□□ -1.25
SMAD1-216ENST00000515527 KRTAP7-1Q8IUC3 87 aa7.27□□□□□ -1.25
SMAD1-216ENST00000515527 MED28Q9H204 178 aa7.27□□□□□ -1.25
SMAD1-216ENST00000515527 MALP21145 153 aa7.26□□□□□ -1.25
SMAD1-216ENST00000515527 RPL12P30050 165 aaKnown RBP7.26□□□□□ -1.25
SMAD1-216ENST00000515527 NEDD8Q15843 81 aa7.26□□□□□ -1.25
SMAD1-216ENST00000515527 RNASEKQ6P5S7 137 aaKnown RBP7.26□□□□□ -1.25
SMAD1-216ENST00000515527 TMSB15BA0A087X1C1 80 aa7.25□□□□□ -1.25
SMAD1-216ENST00000515527 TCRAP04437 139 aa7.25□□□□□ -1.25
SMAD1-216ENST00000515527 TAS2R45P59539 299 aa7.25□□□□□ -1.25
SMAD1-216ENST00000515527 SPAG11AQ6PDA7 123 aa7.25□□□□□ -1.25
SMAD1-216ENST00000515527 MCFD2Q8NI22 146 aa7.25□□□□□ -1.25
SMAD1-216ENST00000515527 THAP6Q8TBB0 222 aa7.25□□□□□ -1.25
SMAD1-216ENST00000515527 KRTAP9-8Q9BYQ0 159 aa7.25□□□□□ -1.25
SMAD1-216ENST00000515527 ESDP10768 282 aa7.24□□□□□ -1.25
SMAD1-216ENST00000515527 HBG1P69891 147 aa7.24□□□□□ -1.25
SMAD1-216ENST00000515527 HBG2P69892 147 aa7.24□□□□□ -1.25
SMAD1-216ENST00000515527 GAGE2EQ4V326 116 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms