RNA–Protein interactions for RNA: ENST00000512768.1

NME1-210, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 1 (best)

Gene NME1, Length 1,056 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-210ENST00000512768 LOC100131303A0A0U1RQF7 123 aa12.56□□□□□ -0.4
NME1-210ENST00000512768 TRGC2P03986 189 aa12.55□□□□□ -0.4
NME1-210ENST00000512768 GYPEP15421 78 aa12.55□□□□□ -0.4
NME1-210ENST00000512768 OR10J3Q5JRS4 329 aa12.55□□□□□ -0.4
NME1-210ENST00000512768 NRACQ8N912 160 aa12.55□□□□□ -0.4
NME1-210ENST00000512768 NEXN-AS1Q8NBZ9 246 aa12.55□□□□□ -0.4
NME1-210ENST00000512768 PRELID3AQ96N28 172 aa12.55□□□□□ -0.4
NME1-210ENST00000512768 NIT2Q9NQR4 276 aa12.55□□□□□ -0.4
NME1-210ENST00000512768 GAGE12JA6NER3 117 aa12.54□□□□□ -0.4
NME1-210ENST00000512768 GAGE1Q13065 139 aa12.54□□□□□ -0.4
NME1-210ENST00000512768 GAGE4Q13068 117 aa12.54□□□□□ -0.4
NME1-210ENST00000512768 GAGE5Q13069 117 aa12.54□□□□□ -0.4
NME1-210ENST00000512768 GAGE13Q4V321 117 aa12.54□□□□□ -0.4
NME1-210ENST00000512768 TNFRSF6BO95407 300 aa12.53□□□□□ -0.4
NME1-210ENST00000512768 PPP1R17O96001 155 aa12.53□□□□□ -0.4
NME1-210ENST00000512768 NPYP01303 97 aa12.53□□□□□ -0.4
NME1-210ENST00000512768 RPL36AP83881 106 aaKnown RBP12.53□□□□□ -0.4
NME1-210ENST00000512768 ZNRF2Q8NHG8 242 aa12.53□□□□□ -0.4
NME1-210ENST00000512768 RPL36ALQ969Q0 106 aaKnown RBP12.53□□□□□ -0.4
NME1-210ENST00000512768 DNAJC30Q96LL9 226 aa12.53□□□□□ -0.4
NME1-210ENST00000512768 WWC2-AS2Q96NR7 200 aa12.53□□□□□ -0.4
NME1-210ENST00000512768 TNFRSF18Q9Y5U5 241 aa12.53□□□□□ -0.4
NME1-210ENST00000512768 DYNC2H1Q8NCM8 4307 aaKnown RBP12.53□□□□□ -0.4
NME1-210ENST00000512768 H3BNG1 76 aa12.52□□□□□ -0.41
NME1-210ENST00000512768 SRIP30626 198 aa12.52□□□□□ -0.41
NME1-210ENST00000512768 CEMP1Q6PRD7 247 aaPredicted RBP12.52□□□□□ -0.41
NME1-210ENST00000512768 ALKBH7Q9BT30 221 aaPredicted RBP12.52□□□□□ -0.41
NME1-210ENST00000512768 TRBV7-3A0A075B6L6 115 aa12.51□□□□□ -0.41
NME1-210ENST00000512768 TRBV6-5A0A0K0K1A5 114 aa12.51□□□□□ -0.41
NME1-210ENST00000512768 IGLL5B9A064 214 aa12.51□□□□□ -0.41
NME1-210ENST00000512768 ST20Q9HBF5 79 aa12.51□□□□□ -0.41
NME1-210ENST00000512768 LAMTOR2Q9Y2Q5 125 aa12.51□□□□□ -0.41
NME1-210ENST00000512768 ICOSQ9Y6W8 199 aa12.51□□□□□ -0.41
NME1-210ENST00000512768 NUPR2A6NF83 97 aa12.5□□□□□ -0.41
NME1-210ENST00000512768 PHOX2AO14813 284 aa12.5□□□□□ -0.41
NME1-210ENST00000512768 MUC7Q8TAX7 377 aa12.5□□□□□ -0.41
NME1-210ENST00000512768 A0A096LPF7 62 aa12.49□□□□□ -0.41
NME1-210ENST00000512768 NUDT3O95989 172 aa12.49□□□□□ -0.41
NME1-210ENST00000512768 LINC00694P0DN24 101 aa12.49□□□□□ -0.41
NME1-210ENST00000512768 UBE2D3P61077 147 aa12.49□□□□□ -0.41
NME1-210ENST00000512768 SUMO2P61956 95 aaKnown RBP12.49□□□□□ -0.41
NME1-210ENST00000512768 UBE2D2P62837 147 aa12.49□□□□□ -0.41
NME1-210ENST00000512768 MRPL23Q16540 153 aaKnown RBP12.49□□□□□ -0.41
NME1-210ENST00000512768 ZFAND6Q6FIF0 208 aa12.49□□□□□ -0.41
NME1-210ENST00000512768 C20orf78Q9BR46 151 aa12.49□□□□□ -0.41
NME1-210ENST00000512768 SDHAF1A6NFY7 115 aa12.48□□□□□ -0.41
NME1-210ENST00000512768 C15orf53Q8NAA6 179 aa12.48□□□□□ -0.41
NME1-210ENST00000512768 TMEM70Q9BUB7 260 aa12.48□□□□□ -0.41
NME1-210ENST00000512768 MAP1LC3AQ9H492 121 aa12.48□□□□□ -0.41
NME1-210ENST00000512768 KLK5Q9Y337 293 aaPredicted RBP12.48□□□□□ -0.41
NME1-210ENST00000512768 LOC389332A0A1B0GUA5 103 aa12.47□□□□□ -0.41
NME1-210ENST00000512768 NEGR1Q7Z3B1 354 aa12.47□□□□□ -0.41
NME1-210ENST00000512768 ATP6V0E2Q8NHE4 81 aa12.47□□□□□ -0.41
NME1-210ENST00000512768 IGHV3-38A0A0C4DH36 116 aa12.46□□□□□ -0.41
NME1-210ENST00000512768 POLR2KP53803 58 aaKnown RBP12.46□□□□□ -0.41
NME1-210ENST00000512768 SH2D6Q7Z4S9 175 aa12.46□□□□□ -0.41
NME1-210ENST00000512768 C1orf196B1AJZ1 125 aa12.45□□□□□ -0.42
NME1-210ENST00000512768 VCYO14598 125 aa12.45□□□□□ -0.42
NME1-210ENST00000512768 PMCHP20382 165 aa12.45□□□□□ -0.42
NME1-210ENST00000512768 RPL32P62910 135 aaKnown RBP12.45□□□□□ -0.42
NME1-210ENST00000512768 IQCJQ1A5X6 159 aa12.45□□□□□ -0.42
NME1-210ENST00000512768 DAZ4Q86SG3 579 aaKnown RBP12.45□□□□□ -0.42
NME1-210ENST00000512768 C18orf32Q8TCD1 76 aa12.45□□□□□ -0.42
NME1-210ENST00000512768 SMIM2Q9BVW6 85 aa12.45□□□□□ -0.42
NME1-210ENST00000512768 DAZ3Q9NR90 486 aaKnown RBP12.45□□□□□ -0.42
NME1-210ENST00000512768 PRSS47A8MTI9 375 aa12.44□□□□□ -0.42
NME1-210ENST00000512768 DEFB104AQ8WTQ1 72 aa12.44□□□□□ -0.42
NME1-210ENST00000512768 TRBV27A0A0K0K1C4 114 aa12.43□□□□□ -0.42
NME1-210ENST00000512768 I3L3M4 83 aa12.43□□□□□ -0.42
NME1-210ENST00000512768 APLNQ9ULZ1 77 aa12.43□□□□□ -0.42
NME1-210ENST00000512768 IFI27P40305 119 aaPredicted RBP12.42□□□□□ -0.42
NME1-210ENST00000512768 Q8N8P6 123 aa12.42□□□□□ -0.42
NME1-210ENST00000512768 PRSS3P2Q8NHM4 247 aa12.42□□□□□ -0.42
NME1-210ENST00000512768 GTSF1LQ9H1H1 148 aa12.42□□□□□ -0.42
NME1-210ENST00000512768 CSMD3Q7Z407 3707 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 IGLV2-18A0A075B6J9 118 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 HIST1H2BKO60814 126 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 HIST1H2BJP06899 126 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 HIST1H2BOP23527 126 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 HIST1H2BBP33778 126 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 HIST1H2BDP58876 126 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 HIST1H2BCP62807 126 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 COTL1Q14019 142 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 HIST2H2BEQ16778 126 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.41□□□□□ -0.42
NME1-210ENST00000512768 HIST1H2BHQ93079 126 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 KIR2DL4Q99706 377 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 HIST1H2BNQ99877 126 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 HIST1H2BMQ99879 126 aa12.41□□□□□ -0.42
NME1-210ENST00000512768 NXT2Q9NPJ8 142 aaKnown RBP12.41□□□□□ -0.42
NME1-210ENST00000512768 TSHBP01222 138 aa12.4□□□□□ -0.42
NME1-210ENST00000512768 LYPD5Q6UWN5 251 aa12.4□□□□□ -0.42
NME1-210ENST00000512768 TENM2Q9NT68 2774 aa12.39□□□□□ -0.43
NME1-210ENST00000512768 TCAPO15273 167 aa12.39□□□□□ -0.43
NME1-210ENST00000512768 FCER1GP30273 86 aa12.39□□□□□ -0.43
NME1-210ENST00000512768 TCTAP57738 103 aa12.39□□□□□ -0.43
NME1-210ENST00000512768 RAB5BP61020 215 aa12.39□□□□□ -0.43
NME1-210ENST00000512768 Q0VG73 95 aa12.39□□□□□ -0.43
NME1-210ENST00000512768 FA2HQ7L5A8 372 aa12.39□□□□□ -0.43
NME1-210ENST00000512768 BAGE3Q86Y29 109 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms