RNA–Protein interactions for RNA: ENST00000511944.5

NR1I3-230, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-230ENST00000511944 NPYP01303 97 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 IGHV3-53P01767 116 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 MGPP08493 103 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 G0S2P27469 103 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 SSTP61278 116 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 SUMO2P61956 95 aaKnown RBP6.52□□□□□ -1.37
NR1I3-230ENST00000511944 FA2HQ7L5A8 372 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 NIT1Q86X76 327 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 Q8N8P6 123 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 PRSS3P2Q8NHM4 247 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 DNAJC30Q96LL9 226 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 SMIM2Q9BVW6 85 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 STAB1Q9NY15 2570 aa6.52□□□□□ -1.37
NR1I3-230ENST00000511944 TRGV1A0A0A0MS02 117 aa6.51□□□□□ -1.37
NR1I3-230ENST00000511944 TRBV10-1A0A0K0K1A3 114 aa6.51□□□□□ -1.37
NR1I3-230ENST00000511944 TRBV27A0A0K0K1C4 114 aa6.51□□□□□ -1.37
NR1I3-230ENST00000511944 IFITM10A6NMD0 228 aa6.51□□□□□ -1.37
NR1I3-230ENST00000511944 G3V4G9 280 aa6.51□□□□□ -1.37
NR1I3-230ENST00000511944 M0QY20 66 aa6.51□□□□□ -1.37
NR1I3-230ENST00000511944 NCR2O95944 276 aa6.51□□□□□ -1.37
NR1I3-230ENST00000511944 ZNF56Q15929 161 aa6.51□□□□□ -1.37
NR1I3-230ENST00000511944 SUMO4Q6EEV6 95 aa6.51□□□□□ -1.37
NR1I3-230ENST00000511944 RNASEKQ6P5S7 137 aaKnown RBP6.51□□□□□ -1.37
NR1I3-230ENST00000511944 SAMD10Q9BYL1 202 aa6.51□□□□□ -1.37
NR1I3-230ENST00000511944 NIT2Q9NQR4 276 aa6.51□□□□□ -1.37
NR1I3-230ENST00000511944 TRRAPQ9Y4A5 3859 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 IGLV2-18A0A075B6J9 118 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 A0A087WWL8 130 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 SMIM6P0DI80 62 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 FABP4P15090 132 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 AMTP48728 403 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 AKR1D1P51857 326 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 IQCJQ1A5X6 159 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 DEFB135Q30KP9 77 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 ORMDL2Q53FV1 153 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 FAM74A4Q5TZK3 123 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 OR4C5Q8NGB2 326 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 URB1-AS1Q96HZ7 61 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 C11orf68Q9H3H3 251 aaKnown RBP6.5□□□□□ -1.37
NR1I3-230ENST00000511944 JPT2Q9H910 190 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 ST20Q9HBF5 79 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 NOP10Q9NPE3 64 aaKnown RBP6.5□□□□□ -1.37
NR1I3-230ENST00000511944 MRPL16Q9NX20 251 aaKnown RBP6.5□□□□□ -1.37
NR1I3-230ENST00000511944 MUC4Q99102 2169 aa6.5□□□□□ -1.37
NR1I3-230ENST00000511944 TRAV26-2A0A0B4J265 109 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 TRBV6-4A0A1B0GX49 114 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 F5H697 171 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 SMKR1H3BMG3 65 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 VCYO14598 125 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 POLR2KP53803 58 aaKnown RBP6.49□□□□□ -1.37
NR1I3-230ENST00000511944 Q6ZTI0 123 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 Q8NAQ8 132 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 OR11H2Q8NH07 326 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 KIR2DL4Q99706 377 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 TMEM70Q9BUB7 260 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 HSPB8Q9UJY1 196 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 NOTCH3Q9UM47 2321 aa6.49□□□□□ -1.37
NR1I3-230ENST00000511944 TRGV2A0A075B6R0 118 aa6.48□□□□□ -1.37
NR1I3-230ENST00000511944 IGHV1-24A0A0C4DH33 117 aa6.48□□□□□ -1.37
NR1I3-230ENST00000511944 NUPR1O60356 82 aa6.48□□□□□ -1.37
NR1I3-230ENST00000511944 HBDP02042 147 aa6.48□□□□□ -1.37
NR1I3-230ENST00000511944 IFI27P40305 119 aaPredicted RBP6.48□□□□□ -1.37
NR1I3-230ENST00000511944 PTTG1IPP53801 180 aa6.48□□□□□ -1.37
NR1I3-230ENST00000511944 IGHV4-28A0A0C4DH34 117 aa6.47□□□□□ -1.37
NR1I3-230ENST00000511944 SDHAF1A6NFY7 115 aa6.47□□□□□ -1.37
NR1I3-230ENST00000511944 K7EQD1 137 aa6.47□□□□□ -1.37
NR1I3-230ENST00000511944 GYPEP15421 78 aa6.47□□□□□ -1.37
NR1I3-230ENST00000511944 GATA1P15976 413 aaPredicted RBP6.47□□□□□ -1.37
NR1I3-230ENST00000511944 FCER1GP30273 86 aa6.47□□□□□ -1.37
NR1I3-230ENST00000511944 LAGE3Q14657 143 aa6.47□□□□□ -1.37
NR1I3-230ENST00000511944 RHOHQ15669 191 aa6.47□□□□□ -1.37
NR1I3-230ENST00000511944 PDZD11Q5EBL8 140 aa6.47□□□□□ -1.37
NR1I3-230ENST00000511944 OR10D4PQ8NGN7 298 aa6.47□□□□□ -1.37
NR1I3-230ENST00000511944 DKK2Q9UBU2 259 aa6.47□□□□□ -1.37
NR1I3-230ENST00000511944 DNAH3Q8TD57 4116 aa6.47□□□□□ -1.37
NR1I3-230ENST00000511944 GAS8-AS1O95177 125 aa6.46□□□□□ -1.38
NR1I3-230ENST00000511944 LEPROTL1O95214 131 aa6.46□□□□□ -1.38
NR1I3-230ENST00000511944 PRM2P04554 102 aa6.46□□□□□ -1.38
NR1I3-230ENST00000511944 NPSP0C0P6 89 aa6.46□□□□□ -1.38
NR1I3-230ENST00000511944 SPART-AS1P0CW21 52 aa6.46□□□□□ -1.38
NR1I3-230ENST00000511944 JOSD1Q15040 202 aaPredicted RBP6.46□□□□□ -1.38
NR1I3-230ENST00000511944 SPATA12Q7Z6I5 190 aa6.46□□□□□ -1.38
NR1I3-230ENST00000511944 RPL39LQ96EH5 51 aaKnown RBP6.46□□□□□ -1.38
NR1I3-230ENST00000511944 KRTAP9-3Q9BYQ3 159 aa6.46□□□□□ -1.38
NR1I3-230ENST00000511944 TNFRSF18Q9Y5U5 241 aa6.46□□□□□ -1.38
NR1I3-230ENST00000511944 A0A096LNJ9 63 aa6.45□□□□□ -1.38
NR1I3-230ENST00000511944 LOC389332A0A1B0GUA5 103 aa6.45□□□□□ -1.38
NR1I3-230ENST00000511944 GAGE12BA1L429 117 aa6.45□□□□□ -1.38
NR1I3-230ENST00000511944 I3L3M4 83 aa6.45□□□□□ -1.38
NR1I3-230ENST00000511944 GAGE7O76087 117 aa6.45□□□□□ -1.38
NR1I3-230ENST00000511944 GAGE12FP0CL80 117 aa6.45□□□□□ -1.38
NR1I3-230ENST00000511944 GAGE12GP0CL81 117 aa6.45□□□□□ -1.38
NR1I3-230ENST00000511944 GAGE12IP0CL82 117 aa6.45□□□□□ -1.38
NR1I3-230ENST00000511944 RPL36AP83881 106 aaKnown RBP6.45□□□□□ -1.38
NR1I3-230ENST00000511944 TMEM97Q5BJF2 176 aa6.45□□□□□ -1.38
NR1I3-230ENST00000511944 FAM222AQ5U5X8 452 aa6.45□□□□□ -1.38
NR1I3-230ENST00000511944 DAZ4Q86SG3 579 aaKnown RBP6.45□□□□□ -1.38
NR1I3-230ENST00000511944 RPL36ALQ969Q0 106 aaKnown RBP6.45□□□□□ -1.38
NR1I3-230ENST00000511944 ZNF479Q96JC4 524 aa6.45□□□□□ -1.38
NR1I3-230ENST00000511944 TM2D3Q9BRN9 247 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms