RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 WFDC11Q8NEX6 87 aa16.29■□□□□ 0.2
SPCS3-203ENST00000507678 NHP2Q9NX24 153 aaKnown RBP16.29■□□□□ 0.2
SPCS3-203ENST00000507678 HLA-DRB4P13762 266 aa16.28■□□□□ 0.2
SPCS3-203ENST00000507678 C9orf85Q96MD7 179 aa16.28■□□□□ 0.2
SPCS3-203ENST00000507678 GEMIN7Q9H840 131 aaKnown RBP16.28■□□□□ 0.2
SPCS3-203ENST00000507678 HLA-DRB4X5D2U9 266 aa16.28■□□□□ 0.2
SPCS3-203ENST00000507678 H3BMG7 143 aa16.28■□□□□ 0.2
SPCS3-203ENST00000507678 RBMY1A1P0DJD3 496 aaKnown RBP16.28■□□□□ 0.2
SPCS3-203ENST00000507678 RBMY1CP0DJD4 496 aa16.28■□□□□ 0.2
SPCS3-203ENST00000507678 RBMY1FQ15415 496 aaKnown RBP16.28■□□□□ 0.2
SPCS3-203ENST00000507678 KLHL30-AS1Q8NEE0 82 aa16.28■□□□□ 0.2
SPCS3-203ENST00000507678 ZFP2Q6ZN57 461 aa16.27■□□□□ 0.2
SPCS3-203ENST00000507678 TMEM61Q8N0U2 210 aa16.27■□□□□ 0.2
SPCS3-203ENST00000507678 SYT8Q8NBV8 401 aa16.27■□□□□ 0.2
SPCS3-203ENST00000507678 KIR2DL4Q99706 377 aa16.27■□□□□ 0.2
SPCS3-203ENST00000507678 CYSLTR1Q9Y271 337 aa16.27■□□□□ 0.2
SPCS3-203ENST00000507678 ODF3Q96PU9 254 aa16.27■□□□□ 0.19
SPCS3-203ENST00000507678 TRAV12-1A0A0B4J245 112 aa16.26■□□□□ 0.19
SPCS3-203ENST00000507678 A0A1W2PRX2 142 aa16.26■□□□□ 0.19
SPCS3-203ENST00000507678 LINC01619G3V211 115 aa16.26■□□□□ 0.19
SPCS3-203ENST00000507678 AMTNQ6UX39 209 aa16.26■□□□□ 0.19
SPCS3-203ENST00000507678 KRTAP1-3Q8IUG1 177 aa16.26■□□□□ 0.19
SPCS3-203ENST00000507678 ACANP16112 2415 aa16.26■□□□□ 0.19
SPCS3-203ENST00000507678 TENM4Q6N022 2769 aa16.26■□□□□ 0.19
SPCS3-203ENST00000507678 POLR2KP53803 58 aaKnown RBP16.25■□□□□ 0.19
SPCS3-203ENST00000507678 POM121L12Q8N7R1 296 aa16.25■□□□□ 0.19
SPCS3-203ENST00000507678 PHLDA1Q8WV24 401 aaPredicted RBP16.25■□□□□ 0.19
SPCS3-203ENST00000507678 DLX4Q92988 240 aaPredicted RBP16.25■□□□□ 0.19
SPCS3-203ENST00000507678 F8W1H4 67 aa16.25■□□□□ 0.19
SPCS3-203ENST00000507678 VCYO14598 125 aa16.24■□□□□ 0.19
SPCS3-203ENST00000507678 CRYGDP07320 174 aa16.24■□□□□ 0.19
SPCS3-203ENST00000507678 OR11H12B2RN74 326 aa16.24■□□□□ 0.19
SPCS3-203ENST00000507678 RNF152Q8N8N0 203 aa16.24■□□□□ 0.19
SPCS3-203ENST00000507678 OR11H2Q8NH07 326 aa16.24■□□□□ 0.19
SPCS3-203ENST00000507678 DYNLRB2Q8TF09 96 aa16.24■□□□□ 0.19
SPCS3-203ENST00000507678 AKAP9Q99996 3911 aa16.23■□□□□ 0.19
SPCS3-203ENST00000507678 TSHBP01222 138 aa16.23■□□□□ 0.19
SPCS3-203ENST00000507678 MORN3Q6PF18 240 aaPredicted RBP16.22■□□□□ 0.19
SPCS3-203ENST00000507678 LRRC75A-AS1Q8N1F1 130 aa16.22■□□□□ 0.19
SPCS3-203ENST00000507678 HIGD1BQ9P298 99 aa16.22■□□□□ 0.19
SPCS3-203ENST00000507678 NOTCH3Q9UM47 2321 aa16.22■□□□□ 0.19
SPCS3-203ENST00000507678 M0QY20 66 aa16.22■□□□□ 0.19
SPCS3-203ENST00000507678 HIST1H4GQ99525 98 aa16.22■□□□□ 0.19
SPCS3-203ENST00000507678 OPRPNQ99935 248 aaPredicted RBP16.21■□□□□ 0.19
SPCS3-203ENST00000507678 RBMY1BA6NDE4 496 aaKnown RBP16.21■□□□□ 0.18
SPCS3-203ENST00000507678 RBMY1EA6NEQ0 496 aaKnown RBP16.21■□□□□ 0.18
SPCS3-203ENST00000507678 RBMY1DP0C7P1 496 aaKnown RBP16.21■□□□□ 0.18
SPCS3-203ENST00000507678 MTORP42345 2549 aa16.2■□□□□ 0.18
SPCS3-203ENST00000507678 E9PLD3 99 aa16.2■□□□□ 0.18
SPCS3-203ENST00000507678 P0DMU3 169 aa16.2■□□□□ 0.18
SPCS3-203ENST00000507678 FAM231AP0DMU4 169 aa16.2■□□□□ 0.18
SPCS3-203ENST00000507678 FAM231CP0DMU5 169 aa16.2■□□□□ 0.18
SPCS3-203ENST00000507678 PROK1P58294 105 aa16.2■□□□□ 0.18
SPCS3-203ENST00000507678 CEND1Q8N111 149 aa16.2■□□□□ 0.18
SPCS3-203ENST00000507678 PRADC1Q9BSG0 188 aa16.2■□□□□ 0.18
SPCS3-203ENST00000507678 PEMTQ9UBM1 199 aa16.2■□□□□ 0.18
SPCS3-203ENST00000507678 IGLL5B9A064 214 aa16.2■□□□□ 0.18
SPCS3-203ENST00000507678 H3BMM0 161 aa16.19■□□□□ 0.18
SPCS3-203ENST00000507678 C4orf3Q8WVX3 66 aa16.19■□□□□ 0.18
SPCS3-203ENST00000507678 ZNF479Q96JC4 524 aa16.19■□□□□ 0.18
SPCS3-203ENST00000507678 Q6ZSV7 163 aa16.19■□□□□ 0.18
SPCS3-203ENST00000507678 Q8N2B8 174 aa16.19■□□□□ 0.18
SPCS3-203ENST00000507678 TRGV11A0A075B6L2 103 aa16.18■□□□□ 0.18
SPCS3-203ENST00000507678 IGIPA6NJ69 53 aa16.18■□□□□ 0.18
SPCS3-203ENST00000507678 C11orf86A6NJI1 115 aa16.18■□□□□ 0.18
SPCS3-203ENST00000507678 MRPL16Q9NX20 251 aaKnown RBP16.18■□□□□ 0.18
SPCS3-203ENST00000507678 NIPBLQ6KC79 2804 aaeCLIP16.18■□□□□ 0.18
SPCS3-203ENST00000507678 TRBV27A0A0K0K1C4 114 aa16.17■□□□□ 0.18
SPCS3-203ENST00000507678 MYMXA0A1B0GTQ4 84 aa16.17■□□□□ 0.18
SPCS3-203ENST00000507678 DNAJC9-AS1A6NH13 148 aa16.17■□□□□ 0.18
SPCS3-203ENST00000507678 GAGE13Q4V321 117 aa16.17■□□□□ 0.18
SPCS3-203ENST00000507678 TMEM170BQ5T4T1 132 aa16.16■□□□□ 0.18
SPCS3-203ENST00000507678 MAP6D1Q9H9H5 199 aa16.16■□□□□ 0.18
SPCS3-203ENST00000507678 ZNF815PA8K554 130 aa16.15■□□□□ 0.18
SPCS3-203ENST00000507678 PMVKQ15126 192 aa16.15■□□□□ 0.18
SPCS3-203ENST00000507678 TRPT1Q86TN4 253 aaKnown RBP16.15■□□□□ 0.18
SPCS3-203ENST00000507678 IGLV4-69A0A075B6H9 119 aa16.15■□□□□ 0.18
SPCS3-203ENST00000507678 SCGB1D4Q6XE38 83 aa16.15■□□□□ 0.18
SPCS3-203ENST00000507678 A0A1B0GWB2 263 aa16.14■□□□□ 0.17
SPCS3-203ENST00000507678 RPL32P62910 135 aaKnown RBP16.14■□□□□ 0.17
SPCS3-203ENST00000507678 Q9UF83 564 aa16.14■□□□□ 0.17
SPCS3-203ENST00000507678 IGHV3OR16-12A0A075B7B8 117 aa16.13■□□□□ 0.17
SPCS3-203ENST00000507678 SPINK8P0C7L1 97 aa16.13■□□□□ 0.17
SPCS3-203ENST00000507678 LINC01587Q99440 93 aa16.13■□□□□ 0.17
SPCS3-203ENST00000507678 TM2D2Q9BX73 214 aa16.13■□□□□ 0.17
SPCS3-203ENST00000507678 ESM1Q9NQ30 184 aa16.13■□□□□ 0.17
SPCS3-203ENST00000507678 PRO0461Q9UI25 63 aa16.13■□□□□ 0.17
SPCS3-203ENST00000507678 TRBV6-5A0A0K0K1A5 114 aa16.13■□□□□ 0.17
SPCS3-203ENST00000507678 DEFB114Q30KQ6 69 aa16.13■□□□□ 0.17
SPCS3-203ENST00000507678 PLEKHB2Q96CS7 222 aa16.12■□□□□ 0.17
SPCS3-203ENST00000507678 ITPR2Q14571 2701 aa16.12■□□□□ 0.17
SPCS3-203ENST00000507678 APOMO95445 188 aa16.12■□□□□ 0.17
SPCS3-203ENST00000507678 MT-ATP8P03928 68 aa16.12■□□□□ 0.17
SPCS3-203ENST00000507678 ZNF418Q8TF45 676 aaPredicted RBP16.12■□□□□ 0.17
SPCS3-203ENST00000507678 C12orf74Q32Q52 190 aa16.11■□□□□ 0.17
SPCS3-203ENST00000507678 RAX2Q96IS3 184 aa16.11■□□□□ 0.17
SPCS3-203ENST00000507678 XCL2Q9UBD3 114 aa16.11■□□□□ 0.17
SPCS3-203ENST00000507678 SS18L2Q9UHA2 77 aa16.11■□□□□ 0.17
SPCS3-203ENST00000507678 ZNRF2Q8NHG8 242 aa16.11■□□□□ 0.17
SPCS3-203ENST00000507678 CDIP1Q9H305 208 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms