RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 MITD1Q8WV92 249 aa4.22□□□□□ -1.73
VCAN-207ENST00000507162 SFRP2Q96HF1 295 aa4.22□□□□□ -1.73
VCAN-207ENST00000507162 CARD19Q96LW7 228 aa4.22□□□□□ -1.73
VCAN-207ENST00000507162 OR5AC2Q9NZP5 309 aa4.22□□□□□ -1.73
VCAN-207ENST00000507162 SSPOA2VEC9 5147 aa4.21□□□□□ -1.73
VCAN-207ENST00000507162 TRBV6-1A0A0K0K1D8 114 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 ANKRD20A5PA0PJZ0 165 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 H3BVH4 76 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 ARMS2P0C7Q2 107 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 KRTAP10-6P60371 365 aaPredicted RBP4.21□□□□□ -1.74
VCAN-207ENST00000507162 VBP1P61758 197 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 NCS1P62166 190 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 GNG5P63218 68 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 UBE2L3P68036 154 aaKnown RBP4.21□□□□□ -1.74
VCAN-207ENST00000507162 MRPS10P82664 201 aaKnown RBP4.21□□□□□ -1.74
VCAN-207ENST00000507162 ZNF674Q2M3X9 581 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 TMEM97Q5BJF2 176 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 FAM74A1Q5RGS3 127 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 FAM162BQ5T6X4 162 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 LINC00337Q8N6G1 96 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 MCFD2Q8NI22 146 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 SMIM4Q8WVI0 70 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 PPDPFQ9H3Y8 114 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 OTORQ9NRC9 128 aa4.21□□□□□ -1.74
VCAN-207ENST00000507162 LYRM2Q9NU23 88 aaPredicted RBP4.21□□□□□ -1.74
VCAN-207ENST00000507162 FCGBPQ9Y6R7 5405 aaPredicted RBP4.2□□□□□ -1.74
VCAN-207ENST00000507162 TRAV6A0A075B6T7 132 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 GVQW2A0A096LPI5 108 aaPredicted RBP4.2□□□□□ -1.74
VCAN-207ENST00000507162 IGKV3D-20A0A0C4DH25 116 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 IGHV1-24A0A0C4DH33 117 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 LOC107984640A0A0U1RRK4 108 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 M0R381 172 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 RGS5O15539 181 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 PAGE4O60829 102 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 MT1HP80294 61 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 IAH1Q2TAA2 248 aaPredicted RBP4.2□□□□□ -1.74
VCAN-207ENST00000507162 ZFP69Q49AA0 526 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 SMUG1Q53HV7 270 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 LINC00173Q6ZV60 143 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 TYMSOSQ8TAI1 123 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 AQP10Q96PS8 301 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 SDHCQ99643 169 aaPredicted RBP4.2□□□□□ -1.74
VCAN-207ENST00000507162 NAA50Q9GZZ1 169 aaKnown RBP4.2□□□□□ -1.74
VCAN-207ENST00000507162 IL36BQ9NZH7 164 aa4.2□□□□□ -1.74
VCAN-207ENST00000507162 GRIFINA4D1Z8 144 aa4.19□□□□□ -1.74
VCAN-207ENST00000507162 SYCNQ0VAF6 134 aa4.19□□□□□ -1.74
VCAN-207ENST00000507162 IL18Q14116 193 aa4.19□□□□□ -1.74
VCAN-207ENST00000507162 ZNF56Q15929 161 aa4.19□□□□□ -1.74
VCAN-207ENST00000507162 ASB16-AS1Q495Z4 193 aa4.19□□□□□ -1.74
VCAN-207ENST00000507162 EIF5AL1Q6IS14 154 aaKnown RBP4.19□□□□□ -1.74
VCAN-207ENST00000507162 PRNTQ86SH4 94 aa4.19□□□□□ -1.74
VCAN-207ENST00000507162 KRTAP11-1Q8IUC1 163 aa4.19□□□□□ -1.74
VCAN-207ENST00000507162 CHCHD10Q8WYQ3 142 aaPredicted RBP4.19□□□□□ -1.74
VCAN-207ENST00000507162 AP3S1Q92572 193 aa4.19□□□□□ -1.74
VCAN-207ENST00000507162 MBD2Q9UBB5 411 aa4.19□□□□□ -1.74
VCAN-207ENST00000507162 LSM5Q9Y4Y9 91 aaKnown RBP4.19□□□□□ -1.74
VCAN-207ENST00000507162 A0A1B0GUV1 79 aa4.18□□□□□ -1.74
VCAN-207ENST00000507162 B4DEV8 164 aa4.18□□□□□ -1.74
VCAN-207ENST00000507162 CTDSP2O14595 271 aa4.18□□□□□ -1.74
VCAN-207ENST00000507162 BCL2P10415 239 aa4.18□□□□□ -1.74
VCAN-207ENST00000507162 S100A11P31949 105 aa4.18□□□□□ -1.74
VCAN-207ENST00000507162 RAB4BP61018 213 aa4.18□□□□□ -1.74
VCAN-207ENST00000507162 IQCJQ1A5X6 159 aa4.18□□□□□ -1.74
VCAN-207ENST00000507162 THAP6Q8TBB0 222 aa4.18□□□□□ -1.74
VCAN-207ENST00000507162 NPCDR1Q9BY65 106 aa4.18□□□□□ -1.74
VCAN-207ENST00000507162 RPP21Q9H633 154 aaKnown RBP4.18□□□□□ -1.74
VCAN-207ENST00000507162 PSG8Q9UQ74 426 aa4.18□□□□□ -1.74
VCAN-207ENST00000507162 USH2AO75445 5202 aa4.18□□□□□ -1.74
VCAN-207ENST00000507162 C9orf170A2RU37 121 aa4.17□□□□□ -1.74
VCAN-207ENST00000507162 FABP5P3A8MUU1 101 aa4.17□□□□□ -1.74
VCAN-207ENST00000507162 M0R036 132 aa4.17□□□□□ -1.74
VCAN-207ENST00000507162 M0R2T5 61 aa4.17□□□□□ -1.74
VCAN-207ENST00000507162 FGF6P10767 208 aa4.17□□□□□ -1.74
VCAN-207ENST00000507162 TPT1P13693 172 aaKnown RBP4.17□□□□□ -1.74
VCAN-207ENST00000507162 SEC61BP60468 96 aaKnown RBP4.17□□□□□ -1.74
VCAN-207ENST00000507162 RPL18AQ02543 176 aaKnown RBP4.17□□□□□ -1.74
VCAN-207ENST00000507162 TMEM243Q9BU79 118 aa4.17□□□□□ -1.74
VCAN-207ENST00000507162 VCX3BQ9H321 246 aa4.17□□□□□ -1.74
VCAN-207ENST00000507162 RAB26Q9ULW5 256 aa4.17□□□□□ -1.74
VCAN-207ENST00000507162 A0A087X002 238 aa4.16□□□□□ -1.74
VCAN-207ENST00000507162 K7EQM0 130 aa4.16□□□□□ -1.74
VCAN-207ENST00000507162 UBE2L6O14933 153 aa4.16□□□□□ -1.74
VCAN-207ENST00000507162 SUMO2P61956 95 aaKnown RBP4.16□□□□□ -1.74
VCAN-207ENST00000507162 HBG1P69891 147 aa4.16□□□□□ -1.74
VCAN-207ENST00000507162 HBG2P69892 147 aa4.16□□□□□ -1.74
VCAN-207ENST00000507162 TMSB15BA0A087X1C1 80 aa4.15□□□□□ -1.75
VCAN-207ENST00000507162 IGHV1-58A0A0C4DH39 117 aa4.15□□□□□ -1.75
VCAN-207ENST00000507162 TSHBP01222 138 aa4.15□□□□□ -1.75
VCAN-207ENST00000507162 FAUP35544 74 aaKnown RBP4.15□□□□□ -1.75
VCAN-207ENST00000507162 SULT1A1P50225 295 aa4.15□□□□□ -1.75
VCAN-207ENST00000507162 TAS2R45P59539 299 aa4.15□□□□□ -1.75
VCAN-207ENST00000507162 UBE2BP63146 152 aa4.15□□□□□ -1.75
VCAN-207ENST00000507162 FLI1Q01543 452 aaPredicted RBP4.15□□□□□ -1.75
VCAN-207ENST00000507162 ATP6V1FQ16864 119 aa4.15□□□□□ -1.75
VCAN-207ENST00000507162 KHDC3LQ587J8 217 aa4.15□□□□□ -1.75
VCAN-207ENST00000507162 ZFP82Q8N141 532 aa4.15□□□□□ -1.75
VCAN-207ENST00000507162 TSKUQ8WUA8 353 aa4.15□□□□□ -1.75
VCAN-207ENST00000507162 SLC25A21Q9BQT8 299 aaPredicted RBP4.15□□□□□ -1.75
VCAN-207ENST00000507162 IGSF23A1L1A6 192 aa4.14□□□□□ -1.75
VCAN-207ENST00000507162 FAM25EA8MYX2 175 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms