RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 ZNF479Q96JC4 524 aa12.74□□□□□ -0.37
ITGA3-207ENST00000506401 C12orf57Q99622 126 aa12.74□□□□□ -0.37
ITGA3-207ENST00000506401 NIT2Q9NQR4 276 aa12.74□□□□□ -0.37
ITGA3-207ENST00000506401 AP5S1Q9NUS5 200 aa12.74□□□□□ -0.37
ITGA3-207ENST00000506401 IFITM10A6NMD0 228 aa12.74□□□□□ -0.37
ITGA3-207ENST00000506401 IGHV3-53P01767 116 aa12.74□□□□□ -0.37
ITGA3-207ENST00000506401 Q8N8P6 123 aa12.74□□□□□ -0.37
ITGA3-207ENST00000506401 HIST1H2BLQ99880 126 aa12.74□□□□□ -0.37
ITGA3-207ENST00000506401 DEFB4AO15263 64 aa12.73□□□□□ -0.37
ITGA3-207ENST00000506401 DEFB130BP0DP73 79 aa12.73□□□□□ -0.37
ITGA3-207ENST00000506401 DEFB130AP0DP74 79 aa12.73□□□□□ -0.37
ITGA3-207ENST00000506401 FAM222AQ5U5X8 452 aa12.73□□□□□ -0.37
ITGA3-207ENST00000506401 LINC00612Q8N6U2 182 aa12.73□□□□□ -0.37
ITGA3-207ENST00000506401 AMTP48728 403 aa12.72□□□□□ -0.37
ITGA3-207ENST00000506401 Q6ZSN1 163 aa12.72□□□□□ -0.37
ITGA3-207ENST00000506401 LINC00469Q8N7U9 141 aa12.72□□□□□ -0.37
ITGA3-207ENST00000506401 SMIM2Q9BVW6 85 aa12.72□□□□□ -0.37
ITGA3-207ENST00000506401 TRBV6-5A0A0K0K1A5 114 aa12.72□□□□□ -0.37
ITGA3-207ENST00000506401 AKR1D1P51857 326 aa12.72□□□□□ -0.37
ITGA3-207ENST00000506401 FAM19A2Q8N3H0 131 aa12.72□□□□□ -0.37
ITGA3-207ENST00000506401 C18orf15Q96N68 181 aa12.72□□□□□ -0.37
ITGA3-207ENST00000506401 RETNQ9HD89 108 aa12.72□□□□□ -0.37
ITGA3-207ENST00000506401 DKK2Q9UBU2 259 aa12.72□□□□□ -0.37
ITGA3-207ENST00000506401 IGLV2-18A0A075B6J9 118 aa12.71□□□□□ -0.38
ITGA3-207ENST00000506401 RPL32P62910 135 aaKnown RBP12.71□□□□□ -0.38
ITGA3-207ENST00000506401 PACRGQ96M98 296 aaPredicted RBP12.71□□□□□ -0.38
ITGA3-207ENST00000506401 SBSPONQ8IVN8 264 aa12.7□□□□□ -0.38
ITGA3-207ENST00000506401 TRGV4A0A0C4DH28 118 aa12.69□□□□□ -0.38
ITGA3-207ENST00000506401 LINC01546A6NGU7 62 aa12.69□□□□□ -0.38
ITGA3-207ENST00000506401 SPART-AS1P0CW21 52 aa12.69□□□□□ -0.38
ITGA3-207ENST00000506401 TMEM70Q9BUB7 260 aa12.69□□□□□ -0.38
ITGA3-207ENST00000506401 TNFRSF18Q9Y5U5 241 aa12.69□□□□□ -0.38
ITGA3-207ENST00000506401 SDHAF1A6NFY7 115 aa12.69□□□□□ -0.38
ITGA3-207ENST00000506401 VCYO14598 125 aa12.69□□□□□ -0.38
ITGA3-207ENST00000506401 POLR2KP53803 58 aaKnown RBP12.69□□□□□ -0.38
ITGA3-207ENST00000506401 OR10D4PQ8NGN7 298 aa12.69□□□□□ -0.38
ITGA3-207ENST00000506401 DNAJC30Q96LL9 226 aa12.69□□□□□ -0.38
ITGA3-207ENST00000506401 IGHV1-24A0A0C4DH33 117 aa12.68□□□□□ -0.38
ITGA3-207ENST00000506401 TEX48A0A1B0GUV7 120 aa12.68□□□□□ -0.38
ITGA3-207ENST00000506401 P0DMU3 169 aa12.68□□□□□ -0.38
ITGA3-207ENST00000506401 FAM231AP0DMU4 169 aa12.68□□□□□ -0.38
ITGA3-207ENST00000506401 FAM231CP0DMU5 169 aa12.68□□□□□ -0.38
ITGA3-207ENST00000506401 DAD1P61803 113 aa12.68□□□□□ -0.38
ITGA3-207ENST00000506401 PMCHL1Q16048 86 aa12.68□□□□□ -0.38
ITGA3-207ENST00000506401 K7EMI3 77 aa12.67□□□□□ -0.38
ITGA3-207ENST00000506401 K7EQD1 137 aa12.67□□□□□ -0.38
ITGA3-207ENST00000506401 LAGE3Q14657 143 aa12.67□□□□□ -0.38
ITGA3-207ENST00000506401 SPATA25Q9BR10 227 aa12.67□□□□□ -0.38
ITGA3-207ENST00000506401 NEXN-AS1Q8NBZ9 246 aa12.67□□□□□ -0.38
ITGA3-207ENST00000506401 MRAPQ8TCY5 172 aa12.67□□□□□ -0.38
ITGA3-207ENST00000506401 TRBV10-1A0A0K0K1A3 114 aa12.66□□□□□ -0.38
ITGA3-207ENST00000506401 TRBV27A0A0K0K1C4 114 aa12.66□□□□□ -0.38
ITGA3-207ENST00000506401 TCAPO15273 167 aa12.66□□□□□ -0.38
ITGA3-207ENST00000506401 FHL2Q14192 279 aa12.66□□□□□ -0.38
ITGA3-207ENST00000506401 SLC25A29Q8N8R3 303 aa12.66□□□□□ -0.38
ITGA3-207ENST00000506401 KIR2DL4Q99706 377 aa12.66□□□□□ -0.38
ITGA3-207ENST00000506401 TRBV6-4A0A1B0GX49 114 aa12.65□□□□□ -0.38
ITGA3-207ENST00000506401 CELA1Q9UNI1 258 aa12.65□□□□□ -0.38
ITGA3-207ENST00000506401 FCER1GP30273 86 aa12.65□□□□□ -0.39
ITGA3-207ENST00000506401 ORMDL2Q53FV1 153 aa12.65□□□□□ -0.39
ITGA3-207ENST00000506401 NEGR1Q7Z3B1 354 aa12.65□□□□□ -0.39
ITGA3-207ENST00000506401 TM2D3Q9BRN9 247 aa12.65□□□□□ -0.39
ITGA3-207ENST00000506401 C11orf68Q9H3H3 251 aaKnown RBP12.65□□□□□ -0.39
ITGA3-207ENST00000506401 I3L3M4 83 aa12.64□□□□□ -0.39
ITGA3-207ENST00000506401 HBDP02042 147 aa12.64□□□□□ -0.39
ITGA3-207ENST00000506401 RPL36AP83881 106 aaKnown RBP12.64□□□□□ -0.39
ITGA3-207ENST00000506401 RPL36ALQ969Q0 106 aaKnown RBP12.64□□□□□ -0.39
ITGA3-207ENST00000506401 Q9UF83 564 aa12.64□□□□□ -0.39
ITGA3-207ENST00000506401 LEPROTL1O95214 131 aa12.63□□□□□ -0.39
ITGA3-207ENST00000506401 SMIM6P0DI80 62 aa12.63□□□□□ -0.39
ITGA3-207ENST00000506401 RHOHQ15669 191 aa12.63□□□□□ -0.39
ITGA3-207ENST00000506401 PRADC1Q9BSG0 188 aa12.63□□□□□ -0.39
ITGA3-207ENST00000506401 TRBV7-3A0A075B6L6 115 aa12.62□□□□□ -0.39
ITGA3-207ENST00000506401 NUDT3O95989 172 aa12.62□□□□□ -0.39
ITGA3-207ENST00000506401 ZNRF2Q8NHG8 242 aa12.62□□□□□ -0.39
ITGA3-207ENST00000506401 HHLA3Q9XRX5 114 aa12.62□□□□□ -0.39
ITGA3-207ENST00000506401 ATP5G1P05496 136 aa12.62□□□□□ -0.39
ITGA3-207ENST00000506401 HSPB8Q9UJY1 196 aa12.62□□□□□ -0.39
ITGA3-207ENST00000506401 A0A096LNJ9 63 aa12.61□□□□□ -0.39
ITGA3-207ENST00000506401 BTF3P20290 206 aaKnown RBP12.61□□□□□ -0.39
ITGA3-207ENST00000506401 G0S2P27469 103 aa12.61□□□□□ -0.39
ITGA3-207ENST00000506401 ZMAT4Q9H898 229 aa12.61□□□□□ -0.39
ITGA3-207ENST00000506401 PRO0255Q9UI72 69 aa12.6□□□□□ -0.39
ITGA3-207ENST00000506401 A0A0J9YWU9 116 aa12.59□□□□□ -0.39
ITGA3-207ENST00000506401 GAGE12JA6NER3 117 aa12.59□□□□□ -0.39
ITGA3-207ENST00000506401 GAGE1Q13065 139 aa12.59□□□□□ -0.39
ITGA3-207ENST00000506401 GAGE4Q13068 117 aa12.59□□□□□ -0.39
ITGA3-207ENST00000506401 GAGE5Q13069 117 aa12.59□□□□□ -0.39
ITGA3-207ENST00000506401 GAGE13Q4V321 117 aa12.59□□□□□ -0.39
ITGA3-207ENST00000506401 DEFB104AQ8WTQ1 72 aa12.59□□□□□ -0.39
ITGA3-207ENST00000506401 TSHBP01222 138 aa12.58□□□□□ -0.4
ITGA3-207ENST00000506401 CRYBA4P53673 196 aa12.58□□□□□ -0.4
ITGA3-207ENST00000506401 KRTDAPP60985 99 aa12.58□□□□□ -0.4
ITGA3-207ENST00000506401 PHLDA1Q8WV24 401 aaPredicted RBP12.58□□□□□ -0.4
ITGA3-207ENST00000506401 LINC00587B1AMM8 73 aa12.58□□□□□ -0.4
ITGA3-207ENST00000506401 C12orf74Q32Q52 190 aa12.58□□□□□ -0.4
ITGA3-207ENST00000506401 DAZ4Q86SG3 579 aaKnown RBP12.58□□□□□ -0.4
ITGA3-207ENST00000506401 DAZ3Q9NR90 486 aaKnown RBP12.58□□□□□ -0.4
ITGA3-207ENST00000506401 UBE2D3P61077 147 aa12.57□□□□□ -0.4
ITGA3-207ENST00000506401 UBE2D2P62837 147 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms