RNA–Protein interactions for RNA: ENST00000506197.2

SMIM20-201, Transcript of small integral membrane protein 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM20, Length 935 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM20-201ENST00000506197 YPEL4Q96NS1 127 aa14.03□□□□□ -0.16
SMIM20-201ENST00000506197 GNB1LQ9BYB4 327 aa14.03□□□□□ -0.16
SMIM20-201ENST00000506197 ICOSQ9Y6W8 199 aa14.03□□□□□ -0.16
SMIM20-201ENST00000506197 BIRC6Q9NR09 4857 aa14.03□□□□□ -0.16
SMIM20-201ENST00000506197 TRAV26-2A0A0B4J265 109 aa14.02□□□□□ -0.17
SMIM20-201ENST00000506197 M0QY20 66 aa14.02□□□□□ -0.17
SMIM20-201ENST00000506197 NUDT3O95989 172 aa14.02□□□□□ -0.17
SMIM20-201ENST00000506197 MT-ND6P03923 174 aa14.02□□□□□ -0.17
SMIM20-201ENST00000506197 P0DMU3 169 aa14.02□□□□□ -0.17
SMIM20-201ENST00000506197 FAM231AP0DMU4 169 aa14.02□□□□□ -0.17
SMIM20-201ENST00000506197 FAM231CP0DMU5 169 aa14.02□□□□□ -0.17
SMIM20-201ENST00000506197 MRPL51Q4U2R6 128 aaKnown RBP14.02□□□□□ -0.17
SMIM20-201ENST00000506197 LOC100131303A0A0U1RQF7 123 aa14.01□□□□□ -0.17
SMIM20-201ENST00000506197 RPL36AP83881 106 aaKnown RBP14.01□□□□□ -0.17
SMIM20-201ENST00000506197 RPL36ALQ969Q0 106 aaKnown RBP14.01□□□□□ -0.17
SMIM20-201ENST00000506197 KMT2AQ03164 3969 aa14□□□□□ -0.17
SMIM20-201ENST00000506197 GAGE12JA6NER3 117 aa14□□□□□ -0.17
SMIM20-201ENST00000506197 CKS2P33552 79 aa14□□□□□ -0.17
SMIM20-201ENST00000506197 GAGE1Q13065 139 aa14□□□□□ -0.17
SMIM20-201ENST00000506197 GAGE4Q13068 117 aa14□□□□□ -0.17
SMIM20-201ENST00000506197 GAGE5Q13069 117 aa14□□□□□ -0.17
SMIM20-201ENST00000506197 MRPL23Q16540 153 aaKnown RBP14□□□□□ -0.17
SMIM20-201ENST00000506197 GAGE13Q4V321 117 aa14□□□□□ -0.17
SMIM20-201ENST00000506197 LY6G6CO95867 125 aa13.99□□□□□ -0.17
SMIM20-201ENST00000506197 NCR2O95944 276 aa13.99□□□□□ -0.17
SMIM20-201ENST00000506197 APCSP02743 223 aa13.99□□□□□ -0.17
SMIM20-201ENST00000506197 SRIP30626 198 aa13.99□□□□□ -0.17
SMIM20-201ENST00000506197 TCTAP57738 103 aa13.99□□□□□ -0.17
SMIM20-201ENST00000506197 DNAJC30Q96LL9 226 aa13.99□□□□□ -0.17
SMIM20-201ENST00000506197 NIT2Q9NQR4 276 aa13.99□□□□□ -0.17
SMIM20-201ENST00000506197 TNFRSF18Q9Y5U5 241 aa13.99□□□□□ -0.17
SMIM20-201ENST00000506197 SMKR1H3BMG3 65 aa13.98□□□□□ -0.17
SMIM20-201ENST00000506197 PPBPP02775 128 aa13.98□□□□□ -0.17
SMIM20-201ENST00000506197 OR10J3Q5JRS4 329 aa13.98□□□□□ -0.17
SMIM20-201ENST00000506197 NEXN-AS1Q8NBZ9 246 aa13.98□□□□□ -0.17
SMIM20-201ENST00000506197 ZNRF2Q8NHG8 242 aa13.98□□□□□ -0.17
SMIM20-201ENST00000506197 MRPL18Q9H0U6 180 aaKnown RBP13.98□□□□□ -0.17
SMIM20-201ENST00000506197 TRBV7-3A0A075B6L6 115 aa13.97□□□□□ -0.17
SMIM20-201ENST00000506197 A0A096LPF7 62 aa13.97□□□□□ -0.17
SMIM20-201ENST00000506197 D6R8Y8 96 aa13.97□□□□□ -0.17
SMIM20-201ENST00000506197 PPP1R17O96001 155 aa13.97□□□□□ -0.17
SMIM20-201ENST00000506197 SH2D6Q7Z4S9 175 aa13.97□□□□□ -0.17
SMIM20-201ENST00000506197 ORMDL3Q8N138 153 aa13.97□□□□□ -0.17
SMIM20-201ENST00000506197 RPL39LQ96EH5 51 aaKnown RBP13.97□□□□□ -0.17
SMIM20-201ENST00000506197 Q9UF83 564 aa13.97□□□□□ -0.17
SMIM20-201ENST00000506197 TRAPPC1Q9Y5R8 145 aa13.97□□□□□ -0.17
SMIM20-201ENST00000506197 FABP9Q0Z7S8 132 aa13.96□□□□□ -0.17
SMIM20-201ENST00000506197 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.96□□□□□ -0.17
SMIM20-201ENST00000506197 NEGR1Q7Z3B1 354 aa13.95□□□□□ -0.18
SMIM20-201ENST00000506197 PRELID3AQ96N28 172 aa13.95□□□□□ -0.18
SMIM20-201ENST00000506197 APLNQ9ULZ1 77 aa13.95□□□□□ -0.18
SMIM20-201ENST00000506197 COLCA2A8K830 154 aa13.94□□□□□ -0.18
SMIM20-201ENST00000506197 GAS8-AS1O95177 125 aa13.94□□□□□ -0.18
SMIM20-201ENST00000506197 ATP6V0E2Q8NHE4 81 aa13.94□□□□□ -0.18
SMIM20-201ENST00000506197 ST20Q9HBF5 79 aa13.94□□□□□ -0.18
SMIM20-201ENST00000506197 FRAS1Q86XX4 4008 aa13.93□□□□□ -0.18
SMIM20-201ENST00000506197 LINC00694P0DN24 101 aa13.93□□□□□ -0.18
SMIM20-201ENST00000506197 RPS10P46783 165 aaKnown RBP13.93□□□□□ -0.18
SMIM20-201ENST00000506197 UBE2D3P61077 147 aa13.93□□□□□ -0.18
SMIM20-201ENST00000506197 UBE2D2P62837 147 aa13.93□□□□□ -0.18
SMIM20-201ENST00000506197 KIAA1644Q3SXP7 199 aa13.93□□□□□ -0.18
SMIM20-201ENST00000506197 NRACQ8N912 160 aa13.93□□□□□ -0.18
SMIM20-201ENST00000506197 TRBV6-5A0A0K0K1A5 114 aa13.92□□□□□ -0.18
SMIM20-201ENST00000506197 TNFRSF6BO95407 300 aa13.92□□□□□ -0.18
SMIM20-201ENST00000506197 RAB5AP20339 215 aa13.92□□□□□ -0.18
SMIM20-201ENST00000506197 LAMTOR2Q9Y2Q5 125 aa13.92□□□□□ -0.18
SMIM20-201ENST00000506197 DNAH6Q9C0G6 4158 aa13.91□□□□□ -0.18
SMIM20-201ENST00000506197 PHOX2AO14813 284 aa13.91□□□□□ -0.18
SMIM20-201ENST00000506197 DAZ4Q86SG3 579 aaKnown RBP13.91□□□□□ -0.18
SMIM20-201ENST00000506197 DAZ3Q9NR90 486 aaKnown RBP13.91□□□□□ -0.18
SMIM20-201ENST00000506197 VPS13DQ5THJ4 4388 aa13.9□□□□□ -0.18
SMIM20-201ENST00000506197 SDHAF1A6NFY7 115 aa13.9□□□□□ -0.18
SMIM20-201ENST00000506197 NPYP01303 97 aa13.9□□□□□ -0.18
SMIM20-201ENST00000506197 C20orf78Q9BR46 151 aa13.9□□□□□ -0.18
SMIM20-201ENST00000506197 IGHV3-38A0A0C4DH36 116 aa13.89□□□□□ -0.19
SMIM20-201ENST00000506197 SUMO2P61956 95 aaKnown RBP13.89□□□□□ -0.19
SMIM20-201ENST00000506197 GTSF1LQ9H1H1 148 aa13.89□□□□□ -0.19
SMIM20-201ENST00000506197 CCL18P55774 89 aa13.88□□□□□ -0.19
SMIM20-201ENST00000506197 TMEM70Q9BUB7 260 aa13.88□□□□□ -0.19
SMIM20-201ENST00000506197 MAP1LC3AQ9H492 121 aa13.88□□□□□ -0.19
SMIM20-201ENST00000506197 PMCHP20382 165 aa13.87□□□□□ -0.19
SMIM20-201ENST00000506197 TMEM97Q5BJF2 176 aa13.87□□□□□ -0.19
SMIM20-201ENST00000506197 LYPD5Q6UWN5 251 aa13.87□□□□□ -0.19
SMIM20-201ENST00000506197 UBE2DNLQ8IWF7 75 aa13.87□□□□□ -0.19
SMIM20-201ENST00000506197 ALKBH7Q9BT30 221 aaPredicted RBP13.87□□□□□ -0.19
SMIM20-201ENST00000506197 I3L3M4 83 aa13.86□□□□□ -0.19
SMIM20-201ENST00000506197 VCYO14598 125 aa13.86□□□□□ -0.19
SMIM20-201ENST00000506197 ESRGQ1W209 222 aa13.86□□□□□ -0.19
SMIM20-201ENST00000506197 LGALS9CQ6DKI2 356 aa13.86□□□□□ -0.19
SMIM20-201ENST00000506197 DNAH10Q8IVF4 4471 aa13.85□□□□□ -0.19
SMIM20-201ENST00000506197 TRGC2P03986 189 aa13.85□□□□□ -0.19
SMIM20-201ENST00000506197 POLR2KP53803 58 aaKnown RBP13.85□□□□□ -0.19
SMIM20-201ENST00000506197 TIRAPP58753 221 aa13.85□□□□□ -0.19
SMIM20-201ENST00000506197 COTL1Q14019 142 aa13.85□□□□□ -0.19
SMIM20-201ENST00000506197 SMIM2Q9BVW6 85 aa13.85□□□□□ -0.19
SMIM20-201ENST00000506197 LOC389332A0A1B0GUA5 103 aa13.84□□□□□ -0.19
SMIM20-201ENST00000506197 RPL32P62910 135 aaKnown RBP13.84□□□□□ -0.19
SMIM20-201ENST00000506197 KIR2DL4Q99706 377 aa13.84□□□□□ -0.19
SMIM20-201ENST00000506197 TRBV27A0A0K0K1C4 114 aa13.83□□□□□ -0.2
SMIM20-201ENST00000506197 LELP1Q5T871 98 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms