RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 MED14OSP0DP75 135 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 TSPEAR-AS2P59090 65 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 ZNF876PQ49A33 203 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 DYNAPQ8N1N2 210 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 DUX3Q96PT4 197 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 LINC00527Q9UJ94 153 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 SLC25A15Q9Y619 301 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 M0R1B8 84 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 OVOL1O14753 267 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 IGHV1-46P01743 117 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 APELAP0DMC3 54 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 C2orf48Q96LS8 159 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 C11orf21Q9P2W6 132 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 SMAD5-AS1Q9Y6J3 95 aa6.86□□□□□ -1.31
HPS4-217ENST00000496385 A0A1W2PPR1 153 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 F5H768 121 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 DLX6P56179 175 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 KRTAP10-9P60411 292 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 HIST1H4AP62805 103 aaKnown RBP6.85□□□□□ -1.31
HPS4-217ENST00000496385 LENEPQ9Y5L5 61 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 PLCE1Q9P212 2302 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.85□□□□□ -1.31
HPS4-217ENST00000496385 RNF223E7ERA6 249 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 H7C2G1 150 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 TSHBP01222 138 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 BSPH1Q075Z2 132 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 CEMP1Q6PRD7 247 aaPredicted RBP6.85□□□□□ -1.31
HPS4-217ENST00000496385 C14orf178Q8N769 122 aaPredicted RBP6.85□□□□□ -1.31
HPS4-217ENST00000496385 DPH3Q96FX2 82 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 AGPAT4-IT1Q9H0P7 198 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 EDA2RQ9HAV5 297 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 PEMTQ9UBM1 199 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 VPS13CQ709C8 3753 aa6.85□□□□□ -1.31
HPS4-217ENST00000496385 ZNF22P17026 224 aaPredicted RBP6.84□□□□□ -1.31
HPS4-217ENST00000496385 CNTFRP26992 372 aa6.84□□□□□ -1.31
HPS4-217ENST00000496385 IGHV4OR15-8A0A075B7B6 117 aa6.84□□□□□ -1.31
HPS4-217ENST00000496385 A0A087WW49 117 aa6.84□□□□□ -1.31
HPS4-217ENST00000496385 NDUFB3O43676 98 aa6.84□□□□□ -1.31
HPS4-217ENST00000496385 IGHV1-8P0DP01 117 aa6.84□□□□□ -1.31
HPS4-217ENST00000496385 PRB4P10163 310 aaPredicted RBP6.84□□□□□ -1.31
HPS4-217ENST00000496385 DYNLRB1Q9NP97 96 aa6.84□□□□□ -1.31
HPS4-217ENST00000496385 PLXNB1O43157 2135 aa6.83□□□□□ -1.32
HPS4-217ENST00000496385 IGHV1-3A0A0C4DH29 117 aa6.83□□□□□ -1.32
HPS4-217ENST00000496385 IGHV1-69P01742 117 aa6.83□□□□□ -1.32
HPS4-217ENST00000496385 C9orf47Q6ZRZ4 202 aa6.83□□□□□ -1.32
HPS4-217ENST00000496385 IGHV3-72A0A0B4J1Y9 119 aa6.83□□□□□ -1.32
HPS4-217ENST00000496385 DCANP1Q8TF63 244 aa6.83□□□□□ -1.32
HPS4-217ENST00000496385 BEX4Q9NWD9 120 aaPredicted RBP6.83□□□□□ -1.32
HPS4-217ENST00000496385 TP53TG1Q9Y2A0 90 aa6.83□□□□□ -1.32
HPS4-217ENST00000496385 TEX15Q9BXT5 2789 aa6.83□□□□□ -1.32
HPS4-217ENST00000496385 IGLV11-55A0A075B6I3 123 aa6.82□□□□□ -1.32
HPS4-217ENST00000496385 CYSRT1A8MQ03 144 aa6.82□□□□□ -1.32
HPS4-217ENST00000496385 VCYO14598 125 aa6.82□□□□□ -1.32
HPS4-217ENST00000496385 GPHB5Q86YW7 130 aa6.82□□□□□ -1.32
HPS4-217ENST00000496385 DAND5Q8N907 189 aa6.82□□□□□ -1.32
HPS4-217ENST00000496385 KIR2DL5BQ8NHK3 375 aa6.82□□□□□ -1.32
HPS4-217ENST00000496385 CCDC168Q8NDH2 2452 aa6.82□□□□□ -1.32
HPS4-217ENST00000496385 IGLV1-47P01700 117 aa6.82□□□□□ -1.32
HPS4-217ENST00000496385 UBE2E1P51965 193 aa6.82□□□□□ -1.32
HPS4-217ENST00000496385 RPL39LQ96EH5 51 aaKnown RBP6.82□□□□□ -1.32
HPS4-217ENST00000496385 ARFGEF3Q5TH69 2177 aa6.82□□□□□ -1.32
HPS4-217ENST00000496385 A0A0J9YXY3 114 aa6.81□□□□□ -1.32
HPS4-217ENST00000496385 POLR2KP53803 58 aaKnown RBP6.81□□□□□ -1.32
HPS4-217ENST00000496385 DUX5Q96PT3 197 aa6.81□□□□□ -1.32
HPS4-217ENST00000496385 ZFAND3Q9H8U3 227 aa6.81□□□□□ -1.32
HPS4-217ENST00000496385 KAAG1Q9UBP8 84 aa6.81□□□□□ -1.32
HPS4-217ENST00000496385 KLK5Q9Y337 293 aaPredicted RBP6.81□□□□□ -1.32
HPS4-217ENST00000496385 ANKRD17O75179 2603 aaKnown RBP6.81□□□□□ -1.32
HPS4-217ENST00000496385 PRAC2D3DTV9 90 aa6.81□□□□□ -1.32
HPS4-217ENST00000496385 F8W735 103 aaPredicted RBP6.81□□□□□ -1.32
HPS4-217ENST00000496385 PDZD2O15018 2839 aa6.81□□□□□ -1.32
HPS4-217ENST00000496385 LOXP28300 417 aaPredicted RBP6.8□□□□□ -1.32
HPS4-217ENST00000496385 CCL8P80075 99 aa6.8□□□□□ -1.32
HPS4-217ENST00000496385 FANCD2OSQ96PS1 177 aa6.8□□□□□ -1.32
HPS4-217ENST00000496385 NAV2Q8IVL1 2488 aa6.8□□□□□ -1.32
HPS4-217ENST00000496385 CELSR1Q9NYQ6 3014 aa6.8□□□□□ -1.32
HPS4-217ENST00000496385 BUB1B-PAK6H3BSN5 160 aa6.8□□□□□ -1.32
HPS4-217ENST00000496385 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.8□□□□□ -1.32
HPS4-217ENST00000496385 IGFL4Q6B9Z1 124 aa6.8□□□□□ -1.32
HPS4-217ENST00000496385 TIMM21Q9BVV7 248 aa6.8□□□□□ -1.32
HPS4-217ENST00000496385 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
HPS4-217ENST00000496385 I3L3M4 83 aa6.79□□□□□ -1.32
HPS4-217ENST00000496385 INAFM2P0DMQ5 153 aa6.79□□□□□ -1.32
HPS4-217ENST00000496385 RPL18AQ02543 176 aaKnown RBP6.79□□□□□ -1.32
HPS4-217ENST00000496385 SMCR5Q8TEV8 140 aa6.79□□□□□ -1.32
HPS4-217ENST00000496385 LITAFQ99732 161 aa6.79□□□□□ -1.32
HPS4-217ENST00000496385 PHLDA3Q9Y5J5 127 aa6.79□□□□□ -1.32
HPS4-217ENST00000496385 E7EQL1 145 aa6.79□□□□□ -1.32
HPS4-217ENST00000496385 SERP2Q8N6R1 65 aa6.79□□□□□ -1.32
HPS4-217ENST00000496385 NPBQ8NG41 125 aa6.79□□□□□ -1.32
HPS4-217ENST00000496385 TRAV21A0A0B4J279 112 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 TRBV6-5A0A0K0K1A5 114 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 hADV29S1A0JD25 119 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 F8WDY8 70 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 TMEM178BH3BS89 294 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 BUB3O43684 328 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 TIMM17BO60830 172 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 NXPH4O95158 308 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 CTSGP08311 255 aa6.78□□□□□ -1.32
HPS4-217ENST00000496385 RHOHQ15669 191 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms