RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 LINC00614P0C842 121 aa13.38□□□□□ -0.27
NECTIN3-211ENST00000493615 ESDP10768 282 aa13.37□□□□□ -0.27
NECTIN3-211ENST00000493615 IGLV2-18A0A075B6J9 118 aa13.36□□□□□ -0.27
NECTIN3-211ENST00000493615 PRSS47A8MTI9 375 aa13.36□□□□□ -0.27
NECTIN3-211ENST00000493615 SUMO2P61956 95 aaKnown RBP13.36□□□□□ -0.27
NECTIN3-211ENST00000493615 FAM19A2Q8N3H0 131 aa13.36□□□□□ -0.27
NECTIN3-211ENST00000493615 C18orf15Q96N68 181 aa13.36□□□□□ -0.27
NECTIN3-211ENST00000493615 C20orf78Q9BR46 151 aa13.36□□□□□ -0.27
NECTIN3-211ENST00000493615 TM2D3Q9BRN9 247 aa13.36□□□□□ -0.27
NECTIN3-211ENST00000493615 EDA2RQ9HAV5 297 aa13.36□□□□□ -0.27
NECTIN3-211ENST00000493615 PRKDCP78527 4128 aaKnown RBP13.35□□□□□ -0.27
NECTIN3-211ENST00000493615 NIT2Q9NQR4 276 aa13.35□□□□□ -0.27
NECTIN3-211ENST00000493615 PPP1R17O96001 155 aa13.34□□□□□ -0.27
NECTIN3-211ENST00000493615 FHL2Q14192 279 aa13.34□□□□□ -0.27
NECTIN3-211ENST00000493615 PMCHL1Q16048 86 aa13.34□□□□□ -0.27
NECTIN3-211ENST00000493615 FA2HQ7L5A8 372 aa13.34□□□□□ -0.27
NECTIN3-211ENST00000493615 NEGR1Q7Z3B1 354 aa13.34□□□□□ -0.27
NECTIN3-211ENST00000493615 HIST1H2BLQ99880 126 aa13.34□□□□□ -0.27
NECTIN3-211ENST00000493615 B9D2Q9BPU9 175 aa13.34□□□□□ -0.27
NECTIN3-211ENST00000493615 ST20Q9HBF5 79 aa13.34□□□□□ -0.27
NECTIN3-211ENST00000493615 TRBV6-5A0A0K0K1A5 114 aa13.33□□□□□ -0.27
NECTIN3-211ENST00000493615 SPART-AS1P0CW21 52 aa13.33□□□□□ -0.27
NECTIN3-211ENST00000493615 CHCHD1Q96BP2 118 aaKnown RBP13.33□□□□□ -0.27
NECTIN3-211ENST00000493615 SMIM2Q9BVW6 85 aa13.33□□□□□ -0.27
NECTIN3-211ENST00000493615 H7C1H1 209 aa13.33□□□□□ -0.28
NECTIN3-211ENST00000493615 PMCHP20382 165 aa13.33□□□□□ -0.28
NECTIN3-211ENST00000493615 POLR2KP53803 58 aaKnown RBP13.33□□□□□ -0.28
NECTIN3-211ENST00000493615 Q8N8P6 123 aa13.33□□□□□ -0.28
NECTIN3-211ENST00000493615 SLC25A29Q8N8R3 303 aa13.33□□□□□ -0.28
NECTIN3-211ENST00000493615 DEFB104AQ8WTQ1 72 aa13.33□□□□□ -0.28
NECTIN3-211ENST00000493615 SPATA25Q9BR10 227 aa13.33□□□□□ -0.28
NECTIN3-211ENST00000493615 TMEM70Q9BUB7 260 aa13.33□□□□□ -0.28
NECTIN3-211ENST00000493615 NXT2Q9NPJ8 142 aaKnown RBP13.33□□□□□ -0.28
NECTIN3-211ENST00000493615 AP5S1Q9NUS5 200 aa13.33□□□□□ -0.28
NECTIN3-211ENST00000493615 HUWE1Q7Z6Z7 4374 aaKnown RBP13.32□□□□□ -0.28
NECTIN3-211ENST00000493615 SDHAF1A6NFY7 115 aa13.32□□□□□ -0.28
NECTIN3-211ENST00000493615 HSBP1O75506 76 aa13.32□□□□□ -0.28
NECTIN3-211ENST00000493615 FABP4P15090 132 aa13.32□□□□□ -0.28
NECTIN3-211ENST00000493615 S100A2P29034 98 aa13.32□□□□□ -0.28
NECTIN3-211ENST00000493615 NEXN-AS1Q8NBZ9 246 aa13.32□□□□□ -0.28
NECTIN3-211ENST00000493615 TCAPO15273 167 aa13.31□□□□□ -0.28
NECTIN3-211ENST00000493615 DAD1P61803 113 aa13.31□□□□□ -0.28
NECTIN3-211ENST00000493615 TRGV4A0A0C4DH28 118 aa13.31□□□□□ -0.28
NECTIN3-211ENST00000493615 LINC01546A6NGU7 62 aa13.31□□□□□ -0.28
NECTIN3-211ENST00000493615 COL7A1Q02388 2944 aa13.31□□□□□ -0.28
NECTIN3-211ENST00000493615 IGHV1-24A0A0C4DH33 117 aa13.3□□□□□ -0.28
NECTIN3-211ENST00000493615 A0A0J9YWU9 116 aa13.3□□□□□ -0.28
NECTIN3-211ENST00000493615 CIDEAO60543 219 aa13.3□□□□□ -0.28
NECTIN3-211ENST00000493615 AMTP48728 403 aa13.3□□□□□ -0.28
NECTIN3-211ENST00000493615 C11orf68Q9H3H3 251 aaKnown RBP13.3□□□□□ -0.28
NECTIN3-211ENST00000493615 K7EQD1 137 aa13.29□□□□□ -0.28
NECTIN3-211ENST00000493615 A0A096LNJ9 63 aa13.29□□□□□ -0.28
NECTIN3-211ENST00000493615 RPL32P62910 135 aaKnown RBP13.29□□□□□ -0.28
NECTIN3-211ENST00000493615 TRBV27A0A0K0K1C4 114 aa13.28□□□□□ -0.28
NECTIN3-211ENST00000493615 LOC100131303A0A0U1RQF7 123 aa13.28□□□□□ -0.28
NECTIN3-211ENST00000493615 TMEM18Q96B42 140 aa13.28□□□□□ -0.28
NECTIN3-211ENST00000493615 TNFRSF18Q9Y5U5 241 aa13.28□□□□□ -0.28
NECTIN3-211ENST00000493615 DNAH9Q9NYC9 4486 aa13.28□□□□□ -0.28
NECTIN3-211ENST00000493615 TRBV6-4A0A1B0GX49 114 aa13.27□□□□□ -0.28
NECTIN3-211ENST00000493615 VCYO14598 125 aa13.27□□□□□ -0.28
NECTIN3-211ENST00000493615 C12orf74Q32Q52 190 aa13.27□□□□□ -0.28
NECTIN3-211ENST00000493615 HHLA3Q9XRX5 114 aa13.27□□□□□ -0.28
NECTIN3-211ENST00000493615 ZNRF2Q8NHG8 242 aa13.27□□□□□ -0.29
NECTIN3-211ENST00000493615 TRBV10-1A0A0K0K1A3 114 aa13.26□□□□□ -0.29
NECTIN3-211ENST00000493615 OR10D4PQ8NGN7 298 aa13.26□□□□□ -0.29
NECTIN3-211ENST00000493615 DNAJC30Q96LL9 226 aa13.26□□□□□ -0.29
NECTIN3-211ENST00000493615 PACRGQ96M98 296 aaPredicted RBP13.26□□□□□ -0.29
NECTIN3-211ENST00000493615 AKR1D1P51857 326 aa13.25□□□□□ -0.29
NECTIN3-211ENST00000493615 LAGE3Q14657 143 aa13.25□□□□□ -0.29
NECTIN3-211ENST00000493615 ZMAT4Q9H898 229 aa13.25□□□□□ -0.29
NECTIN3-211ENST00000493615 TRBV7-3A0A075B6L6 115 aa13.25□□□□□ -0.29
NECTIN3-211ENST00000493615 GAGE12JA6NER3 117 aa13.25□□□□□ -0.29
NECTIN3-211ENST00000493615 ATP5G1P05496 136 aa13.25□□□□□ -0.29
NECTIN3-211ENST00000493615 GAGE1Q13065 139 aa13.25□□□□□ -0.29
NECTIN3-211ENST00000493615 GAGE4Q13068 117 aa13.25□□□□□ -0.29
NECTIN3-211ENST00000493615 GAGE5Q13069 117 aa13.25□□□□□ -0.29
NECTIN3-211ENST00000493615 GAGE13Q4V321 117 aa13.25□□□□□ -0.29
NECTIN3-211ENST00000493615 IGHV3-38A0A0C4DH36 116 aa13.24□□□□□ -0.29
NECTIN3-211ENST00000493615 TEX48A0A1B0GUV7 120 aa13.24□□□□□ -0.29
NECTIN3-211ENST00000493615 CRYBA4P53673 196 aa13.24□□□□□ -0.29
NECTIN3-211ENST00000493615 LINC00173Q6ZV60 143 aa13.24□□□□□ -0.29
NECTIN3-211ENST00000493615 PHLDA1Q8WV24 401 aaPredicted RBP13.24□□□□□ -0.29
NECTIN3-211ENST00000493615 TGP01266 2768 aa13.23□□□□□ -0.29
NECTIN3-211ENST00000493615 I3L3M4 83 aa13.23□□□□□ -0.29
NECTIN3-211ENST00000493615 TSHBP01222 138 aa13.23□□□□□ -0.29
NECTIN3-211ENST00000493615 HTN3P15516 51 aa13.23□□□□□ -0.29
NECTIN3-211ENST00000493615 RHOHQ15669 191 aa13.23□□□□□ -0.29
NECTIN3-211ENST00000493615 KIR2DL4Q99706 377 aa13.23□□□□□ -0.29
NECTIN3-211ENST00000493615 NHLRC4P0CG21 123 aaPredicted RBP13.23□□□□□ -0.29
NECTIN3-211ENST00000493615 RPL36AP83881 106 aaKnown RBP13.23□□□□□ -0.29
NECTIN3-211ENST00000493615 RPL36ALQ969Q0 106 aaKnown RBP13.23□□□□□ -0.29
NECTIN3-211ENST00000493615 PRO0255Q9UI72 69 aa13.23□□□□□ -0.29
NECTIN3-211ENST00000493615 F5H768 121 aa13.22□□□□□ -0.29
NECTIN3-211ENST00000493615 FCER1GP30273 86 aa13.22□□□□□ -0.29
NECTIN3-211ENST00000493615 PRADC1Q9BSG0 188 aa13.22□□□□□ -0.29
NECTIN3-211ENST00000493615 HBDP02042 147 aa13.21□□□□□ -0.29
NECTIN3-211ENST00000493615 NANOS2P60321 138 aaKnown RBP13.21□□□□□ -0.29
NECTIN3-211ENST00000493615 UBE2D3P61077 147 aa13.21□□□□□ -0.29
NECTIN3-211ENST00000493615 UBE2D2P62837 147 aa13.21□□□□□ -0.29
NECTIN3-211ENST00000493615 Q6ZTC4 211 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms