RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 NACAE9PAV3 2078 aa9.41□□□□□ -0.9
MSH6-208ENST00000493177 PLECQ15149 4684 aaKnown RBP9.4□□□□□ -0.9
MSH6-208ENST00000493177 TRAV26-1A0A087WT03 109 aa9.4□□□□□ -0.9
MSH6-208ENST00000493177 TRBV6-4A0A1B0GX49 114 aa9.4□□□□□ -0.9
MSH6-208ENST00000493177 SMKR1H3BMG3 65 aa9.4□□□□□ -0.9
MSH6-208ENST00000493177 H7C1H1 209 aa9.4□□□□□ -0.9
MSH6-208ENST00000493177 NCR2O95944 276 aa9.4□□□□□ -0.9
MSH6-208ENST00000493177 CKS2P33552 79 aa9.4□□□□□ -0.9
MSH6-208ENST00000493177 RPS10P46783 165 aaKnown RBP9.4□□□□□ -0.9
MSH6-208ENST00000493177 CRYBA4P53673 196 aa9.4□□□□□ -0.9
MSH6-208ENST00000493177 FABP9Q0Z7S8 132 aa9.4□□□□□ -0.9
MSH6-208ENST00000493177 RHOHQ15669 191 aa9.4□□□□□ -0.9
MSH6-208ENST00000493177 SLC25A29Q8N8R3 303 aa9.4□□□□□ -0.9
MSH6-208ENST00000493177 MRAP2Q96G30 205 aa9.4□□□□□ -0.9
MSH6-208ENST00000493177 P0DMU3 169 aa9.39□□□□□ -0.91
MSH6-208ENST00000493177 FAM231AP0DMU4 169 aa9.39□□□□□ -0.91
MSH6-208ENST00000493177 FAM231CP0DMU5 169 aa9.39□□□□□ -0.91
MSH6-208ENST00000493177 RAB5AP20339 215 aa9.39□□□□□ -0.91
MSH6-208ENST00000493177 KIAA1644Q3SXP7 199 aa9.39□□□□□ -0.91
MSH6-208ENST00000493177 DNAH1Q9P2D7 4330 aa9.39□□□□□ -0.91
MSH6-208ENST00000493177 GAGE12JA6NER3 117 aa9.38□□□□□ -0.91
MSH6-208ENST00000493177 D6R8Y8 96 aa9.38□□□□□ -0.91
MSH6-208ENST00000493177 M0QY20 66 aa9.38□□□□□ -0.91
MSH6-208ENST00000493177 GYPEP15421 78 aa9.38□□□□□ -0.91
MSH6-208ENST00000493177 GAGE1Q13065 139 aa9.38□□□□□ -0.91
MSH6-208ENST00000493177 GAGE4Q13068 117 aa9.38□□□□□ -0.91
MSH6-208ENST00000493177 GAGE5Q13069 117 aa9.38□□□□□ -0.91
MSH6-208ENST00000493177 GAGE13Q4V321 117 aa9.38□□□□□ -0.91
MSH6-208ENST00000493177 OR10J3Q5JRS4 329 aa9.38□□□□□ -0.91
MSH6-208ENST00000493177 LOC100131303A0A0U1RQF7 123 aa9.37□□□□□ -0.91
MSH6-208ENST00000493177 GAS8-AS1O95177 125 aa9.37□□□□□ -0.91
MSH6-208ENST00000493177 ORMDL3Q8N138 153 aa9.37□□□□□ -0.91
MSH6-208ENST00000493177 RPL39LQ96EH5 51 aaKnown RBP9.37□□□□□ -0.91
MSH6-208ENST00000493177 VSIG2Q96IQ7 327 aa9.37□□□□□ -0.91
MSH6-208ENST00000493177 TNFRSF18Q9Y5U5 241 aa9.37□□□□□ -0.91
MSH6-208ENST00000493177 TRBV10-1A0A0K0K1A3 114 aa9.36□□□□□ -0.91
MSH6-208ENST00000493177 NUDT3O95989 172 aa9.36□□□□□ -0.91
MSH6-208ENST00000493177 PPBPP02775 128 aa9.36□□□□□ -0.91
MSH6-208ENST00000493177 RPL36AP83881 106 aaKnown RBP9.36□□□□□ -0.91
MSH6-208ENST00000493177 NEXN-AS1Q8NBZ9 246 aa9.36□□□□□ -0.91
MSH6-208ENST00000493177 ZNRF2Q8NHG8 242 aa9.36□□□□□ -0.91
MSH6-208ENST00000493177 RPL36ALQ969Q0 106 aaKnown RBP9.36□□□□□ -0.91
MSH6-208ENST00000493177 PRELID3AQ96N28 172 aa9.36□□□□□ -0.91
MSH6-208ENST00000493177 NIT2Q9NQR4 276 aa9.36□□□□□ -0.91
MSH6-208ENST00000493177 PPP1R17O96001 155 aa9.35□□□□□ -0.91
MSH6-208ENST00000493177 SRIP30626 198 aa9.35□□□□□ -0.91
MSH6-208ENST00000493177 DNAJC30Q96LL9 226 aa9.35□□□□□ -0.91
MSH6-208ENST00000493177 Q9UF83 564 aa9.35□□□□□ -0.91
MSH6-208ENST00000493177 ICOSQ9Y6W8 199 aa9.35□□□□□ -0.91
MSH6-208ENST00000493177 A0A096LPF7 62 aa9.34□□□□□ -0.91
MSH6-208ENST00000493177 TNFRSF6BO95407 300 aa9.34□□□□□ -0.91
MSH6-208ENST00000493177 TRGC2P03986 189 aa9.34□□□□□ -0.91
MSH6-208ENST00000493177 ST20Q9HBF5 79 aa9.34□□□□□ -0.91
MSH6-208ENST00000493177 TRBV7-3A0A075B6L6 115 aa9.33□□□□□ -0.92
MSH6-208ENST00000493177 H3BNG1 76 aa9.33□□□□□ -0.92
MSH6-208ENST00000493177 NPYP01303 97 aa9.33□□□□□ -0.92
MSH6-208ENST00000493177 MRPL23Q16540 153 aaKnown RBP9.33□□□□□ -0.92
MSH6-208ENST00000493177 NRACQ8N912 160 aa9.33□□□□□ -0.92
MSH6-208ENST00000493177 C15orf53Q8NAA6 179 aa9.33□□□□□ -0.92
MSH6-208ENST00000493177 IGHV3-38A0A0C4DH36 116 aa9.32□□□□□ -0.92
MSH6-208ENST00000493177 MAP1LC3AQ9H492 121 aa9.32□□□□□ -0.92
MSH6-208ENST00000493177 LAMTOR2Q9Y2Q5 125 aa9.32□□□□□ -0.92
MSH6-208ENST00000493177 TRBV6-5A0A0K0K1A5 114 aa9.31□□□□□ -0.92
MSH6-208ENST00000493177 LOC389332A0A1B0GUA5 103 aa9.31□□□□□ -0.92
MSH6-208ENST00000493177 SDHAF1A6NFY7 115 aa9.31□□□□□ -0.92
MSH6-208ENST00000493177 M0R2N4 97 aa9.31□□□□□ -0.92
MSH6-208ENST00000493177 PHOX2AO14813 284 aa9.31□□□□□ -0.92
MSH6-208ENST00000493177 UBE2D3P61077 147 aa9.31□□□□□ -0.92
MSH6-208ENST00000493177 SUMO2P61956 95 aaKnown RBP9.31□□□□□ -0.92
MSH6-208ENST00000493177 UBE2D2P62837 147 aa9.31□□□□□ -0.92
MSH6-208ENST00000493177 ATP6V0E2Q8NHE4 81 aa9.31□□□□□ -0.92
MSH6-208ENST00000493177 ALKBH7Q9BT30 221 aaPredicted RBP9.31□□□□□ -0.92
MSH6-208ENST00000493177 PMCHP20382 165 aa9.3□□□□□ -0.92
MSH6-208ENST00000493177 NEGR1Q7Z3B1 354 aa9.3□□□□□ -0.92
MSH6-208ENST00000493177 SH2D6Q7Z4S9 175 aa9.3□□□□□ -0.92
MSH6-208ENST00000493177 C20orf78Q9BR46 151 aa9.3□□□□□ -0.92
MSH6-208ENST00000493177 IGLV2-18A0A075B6J9 118 aa9.29□□□□□ -0.92
MSH6-208ENST00000493177 LINC00694P0DN24 101 aa9.29□□□□□ -0.92
MSH6-208ENST00000493177 DAZ4Q86SG3 579 aaKnown RBP9.29□□□□□ -0.92
MSH6-208ENST00000493177 DEFB104AQ8WTQ1 72 aa9.29□□□□□ -0.92
MSH6-208ENST00000493177 TMEM70Q9BUB7 260 aa9.29□□□□□ -0.92
MSH6-208ENST00000493177 DAZ3Q9NR90 486 aaKnown RBP9.29□□□□□ -0.92
MSH6-208ENST00000493177 I3L3M4 83 aa9.28□□□□□ -0.92
MSH6-208ENST00000493177 VCYO14598 125 aa9.28□□□□□ -0.92
MSH6-208ENST00000493177 IQCJQ1A5X6 159 aa9.28□□□□□ -0.92
MSH6-208ENST00000493177 SMIM2Q9BVW6 85 aa9.28□□□□□ -0.92
MSH6-208ENST00000493177 C1orf196B1AJZ1 125 aa9.27□□□□□ -0.93
MSH6-208ENST00000493177 FCER1GP30273 86 aa9.27□□□□□ -0.93
MSH6-208ENST00000493177 POLR2KP53803 58 aaKnown RBP9.27□□□□□ -0.93
MSH6-208ENST00000493177 COTL1Q14019 142 aa9.27□□□□□ -0.93
MSH6-208ENST00000493177 PRSS3P2Q8NHM4 247 aa9.27□□□□□ -0.93
MSH6-208ENST00000493177 GTSF1LQ9H1H1 148 aa9.27□□□□□ -0.93
MSH6-208ENST00000493177 IFI27P40305 119 aaPredicted RBP9.26□□□□□ -0.93
MSH6-208ENST00000493177 CCL18P55774 89 aa9.26□□□□□ -0.93
MSH6-208ENST00000493177 RPL32P62910 135 aaKnown RBP9.26□□□□□ -0.93
MSH6-208ENST00000493177 Q8N8P6 123 aa9.26□□□□□ -0.93
MSH6-208ENST00000493177 C18orf32Q8TCD1 76 aa9.26□□□□□ -0.93
MSH6-208ENST00000493177 KIR2DL4Q99706 377 aa9.26□□□□□ -0.93
MSH6-208ENST00000493177 EPPK1P58107 5090 aaKnown RBP9.25□□□□□ -0.93
MSH6-208ENST00000493177 KMT2AQ03164 3969 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms