RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 MBPP02686 304 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-233ENST00000489352 TPT1P13693 172 aaKnown RBP6.77□□□□□ -1.33
HDAC6-233ENST00000489352 TAS2R45P59539 299 aa6.77□□□□□ -1.33
HDAC6-233ENST00000489352 GNG5P63218 68 aa6.77□□□□□ -1.33
HDAC6-233ENST00000489352 IQCJQ1A5X6 159 aa6.77□□□□□ -1.33
HDAC6-233ENST00000489352 KHDC3LQ587J8 217 aa6.77□□□□□ -1.33
HDAC6-233ENST00000489352 EIF5AL1Q6IS14 154 aaKnown RBP6.77□□□□□ -1.33
HDAC6-233ENST00000489352 LINC00337Q8N6G1 96 aa6.77□□□□□ -1.33
HDAC6-233ENST00000489352 LSM5Q9Y4Y9 91 aaKnown RBP6.77□□□□□ -1.33
HDAC6-233ENST00000489352 V9GYH0 126 aa6.77□□□□□ -1.33
HDAC6-233ENST00000489352 SERTM2A0A1B0GWG4 89 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 F5H697 171 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 ZNF561-AS1K7EIQ3 104 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 UBE2L6O14933 153 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 FGF6P10767 208 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 SYCNQ0VAF6 134 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 ATP6V1FQ16864 119 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 PYDC2Q56P42 97 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 LINC00173Q6ZV60 143 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 STX12Q86Y82 276 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 TYMSOSQ8TAI1 123 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 KCNIP2Q9NS61 270 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 PSG8Q9UQ74 426 aa6.76□□□□□ -1.33
HDAC6-233ENST00000489352 C9orf170A2RU37 121 aa6.75□□□□□ -1.33
HDAC6-233ENST00000489352 FABP5P3A8MUU1 101 aa6.75□□□□□ -1.33
HDAC6-233ENST00000489352 UPK1BO75841 260 aa6.75□□□□□ -1.33
HDAC6-233ENST00000489352 PVALBP20472 110 aaPredicted RBP6.75□□□□□ -1.33
HDAC6-233ENST00000489352 SULT1A1P50225 295 aa6.75□□□□□ -1.33
HDAC6-233ENST00000489352 DEFA1P59665 94 aa6.75□□□□□ -1.33
HDAC6-233ENST00000489352 DEFA3P59666 94 aa6.75□□□□□ -1.33
HDAC6-233ENST00000489352 PRNTQ86SH4 94 aa6.75□□□□□ -1.33
HDAC6-233ENST00000489352 ZFP82Q8N141 532 aa6.75□□□□□ -1.33
HDAC6-233ENST00000489352 LINC00526Q96FQ7 95 aa6.75□□□□□ -1.33
HDAC6-233ENST00000489352 TMEM243Q9BU79 118 aa6.75□□□□□ -1.33
HDAC6-233ENST00000489352 ASB16-AS1Q495Z4 193 aa6.74□□□□□ -1.33
HDAC6-233ENST00000489352 SAPCD1Q5SSQ6 148 aa6.74□□□□□ -1.33
HDAC6-233ENST00000489352 TRIQKQ629K1 86 aa6.74□□□□□ -1.33
HDAC6-233ENST00000489352 CHCHD10Q8WYQ3 142 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-233ENST00000489352 ISOC2Q96AB3 205 aa6.74□□□□□ -1.33
HDAC6-233ENST00000489352 GRIFINA4D1Z8 144 aa6.73□□□□□ -1.33
HDAC6-233ENST00000489352 AP3S2P59780 193 aa6.73□□□□□ -1.33
HDAC6-233ENST00000489352 SEC61BP60468 96 aaKnown RBP6.73□□□□□ -1.33
HDAC6-233ENST00000489352 RGS21Q2M5E4 152 aa6.73□□□□□ -1.33
HDAC6-233ENST00000489352 THAP6Q8TBB0 222 aa6.73□□□□□ -1.33
HDAC6-233ENST00000489352 SDHCQ99643 169 aaPredicted RBP6.73□□□□□ -1.33
HDAC6-233ENST00000489352 PPDPFQ9H3Y8 114 aa6.73□□□□□ -1.33
HDAC6-233ENST00000489352 RPP21Q9H633 154 aaKnown RBP6.73□□□□□ -1.33
HDAC6-233ENST00000489352 IGHV1-58A0A0C4DH39 117 aa6.72□□□□□ -1.33
HDAC6-233ENST00000489352 C17orf112F2Z3M2 114 aa6.72□□□□□ -1.33
HDAC6-233ENST00000489352 IL7P13232 177 aa6.72□□□□□ -1.33
HDAC6-233ENST00000489352 FLI1Q01543 452 aaPredicted RBP6.72□□□□□ -1.33
HDAC6-233ENST00000489352 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
HDAC6-233ENST00000489352 M0R036 132 aa6.71□□□□□ -1.34
HDAC6-233ENST00000489352 BCL2P10415 239 aa6.71□□□□□ -1.34
HDAC6-233ENST00000489352 IFITM3Q01628 133 aa6.71□□□□□ -1.34
HDAC6-233ENST00000489352 TOMM5Q8N4H5 51 aa6.71□□□□□ -1.34
HDAC6-233ENST00000489352 OR5C1Q8NGR4 320 aa6.71□□□□□ -1.34
HDAC6-233ENST00000489352 SYNE2Q8WXH0 6885 aaKnown RBP6.71□□□□□ -1.34
HDAC6-233ENST00000489352 CENPXA8MT69 81 aa6.7□□□□□ -1.34
HDAC6-233ENST00000489352 TCRAP04437 139 aa6.7□□□□□ -1.34
HDAC6-233ENST00000489352 UBE2BP63146 152 aa6.7□□□□□ -1.34
HDAC6-233ENST00000489352 DNLZQ5SXM8 178 aa6.7□□□□□ -1.34
HDAC6-233ENST00000489352 MZT2BQ6NZ67 158 aa6.7□□□□□ -1.34
HDAC6-233ENST00000489352 DEDD2Q8WXF8 326 aa6.7□□□□□ -1.34
HDAC6-233ENST00000489352 KRTAP4-1Q9BYQ7 146 aa6.7□□□□□ -1.34
HDAC6-233ENST00000489352 FAM25EA8MYX2 175 aa6.69□□□□□ -1.34
HDAC6-233ENST00000489352 KRBOX1C9JBD0 128 aa6.69□□□□□ -1.34
HDAC6-233ENST00000489352 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-233ENST00000489352 CAMPP49913 170 aa6.69□□□□□ -1.34
HDAC6-233ENST00000489352 MT1HP80294 61 aa6.69□□□□□ -1.34
HDAC6-233ENST00000489352 TMEM252Q8N6L7 170 aa6.69□□□□□ -1.34
HDAC6-233ENST00000489352 C5orf17Q8NAS9 161 aa6.69□□□□□ -1.34
HDAC6-233ENST00000489352 IGSF23A1L1A6 192 aa6.68□□□□□ -1.34
HDAC6-233ENST00000489352 NAP1L6A6NFF2 107 aa6.68□□□□□ -1.34
HDAC6-233ENST00000489352 M0R2T5 61 aa6.68□□□□□ -1.34
HDAC6-233ENST00000489352 APOMO95445 188 aa6.68□□□□□ -1.34
HDAC6-233ENST00000489352 SMIM17P0DL12 118 aa6.68□□□□□ -1.34
HDAC6-233ENST00000489352 KRTAP10-6P60371 365 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-233ENST00000489352 FOXI1Q12951 378 aa6.68□□□□□ -1.34
HDAC6-233ENST00000489352 ENKURQ8TC29 256 aa6.68□□□□□ -1.34
HDAC6-233ENST00000489352 IGLV4-69A0A075B6H9 119 aa6.67□□□□□ -1.34
HDAC6-233ENST00000489352 TMSB15BA0A087X1C1 80 aa6.67□□□□□ -1.34
HDAC6-233ENST00000489352 LYRM1O43325 122 aa6.67□□□□□ -1.34
HDAC6-233ENST00000489352 XCL1P47992 114 aa6.67□□□□□ -1.34
HDAC6-233ENST00000489352 AMMECR1LQ6DCA0 310 aa6.67□□□□□ -1.34
HDAC6-233ENST00000489352 PQLC2Q6ZP29 291 aa6.67□□□□□ -1.34
HDAC6-233ENST00000489352 FLVCR2Q9UPI3 526 aa6.67□□□□□ -1.34
HDAC6-233ENST00000489352 A0A087X002 238 aa6.66□□□□□ -1.34
HDAC6-233ENST00000489352 FAM240BA0A1B0GVZ2 78 aa6.66□□□□□ -1.34
HDAC6-233ENST00000489352 A0A1W2PPV4 95 aa6.66□□□□□ -1.34
HDAC6-233ENST00000489352 PLA2G10O15496 165 aa6.66□□□□□ -1.34
HDAC6-233ENST00000489352 TSHBP01222 138 aa6.66□□□□□ -1.34
HDAC6-233ENST00000489352 RPL12P30050 165 aaKnown RBP6.66□□□□□ -1.34
HDAC6-233ENST00000489352 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
HDAC6-233ENST00000489352 Q6ZNX1 250 aa6.66□□□□□ -1.34
HDAC6-233ENST00000489352 LINC00304Q8N9R0 145 aa6.66□□□□□ -1.34
HDAC6-233ENST00000489352 CAMK2N2Q96S95 79 aa6.66□□□□□ -1.34
HDAC6-233ENST00000489352 ZNF471Q9BX82 626 aaPredicted RBP6.66□□□□□ -1.34
HDAC6-233ENST00000489352 KRTAP11-1Q8IUC1 163 aa6.65□□□□□ -1.34
HDAC6-233ENST00000489352 SSBP4Q9BWG4 385 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms