RNA–Protein interactions for RNA: ENST00000487565.5

GARNL3-218, Transcript of GTPase activating Rap/RanGAP domain like 3, human

TSL 4

Gene GARNL3, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GARNL3-218	ENST00000487565	ATP5G1	P05496	136 aa		5.42	□□□□□ -1.54
GARNL3-218	ENST00000487565	HTN3	P15516	51 aa		5.42	□□□□□ -1.54
GARNL3-218	ENST00000487565	CFAP126	Q5VTH2	177 aa		5.42	□□□□□ -1.54
GARNL3-218	ENST00000487565	RASL11A	Q6T310	242 aa		5.42	□□□□□ -1.54
GARNL3-218	ENST00000487565	C14orf178	Q8N769	122 aa	Predicted RBP	5.42	□□□□□ -1.54
GARNL3-218	ENST00000487565	FAM210B	Q96KR6	192 aa		5.42	□□□□□ -1.54
GARNL3-218	ENST00000487565	C18orf15	Q96N68	181 aa		5.42	□□□□□ -1.54
GARNL3-218	ENST00000487565	DPH3P1	Q9H4G8	78 aa		5.42	□□□□□ -1.54
GARNL3-218	ENST00000487565	JPT2	Q9H910	190 aa		5.42	□□□□□ -1.54
GARNL3-218	ENST00000487565	IGHV3-73	A0A0B4J1V6	119 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	TRGV4	A0A0C4DH28	118 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	HLA-DQA1	P01909	254 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	MT-ND6	P03923	174 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	EVI2A	P22794	236 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	NANOS2	P60321	138 aa	Known RBP	5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	C12orf74	Q32Q52	190 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	COX19	Q49B96	90 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	ZFP2	Q6ZN57	461 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565		Q6ZTC4	211 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	GATD1	Q8NB37	220 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	ZNF479	Q96JC4	524 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	YPEL4	Q96NS1	127 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	SAMD10	Q9BYL1	202 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565	TMEM191A	Q9H0A3	160 aa		5.41	□□□□□ -1.54
GARNL3-218	ENST00000487565		F5H768	121 aa		5.4	□□□□□ -1.54
GARNL3-218	ENST00000487565		H7C1H1	209 aa		5.4	□□□□□ -1.54
GARNL3-218	ENST00000487565	CIDEA	O60543	219 aa		5.4	□□□□□ -1.54
GARNL3-218	ENST00000487565	TMEM136	Q6ZRR5	245 aa		5.4	□□□□□ -1.54
GARNL3-218	ENST00000487565	AMN1	Q8IY45	258 aa		5.4	□□□□□ -1.54
GARNL3-218	ENST00000487565	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.4	□□□□□ -1.54
GARNL3-218	ENST00000487565	EDA2R	Q9HAV5	297 aa		5.4	□□□□□ -1.54
GARNL3-218	ENST00000487565	COL7A1	Q02388	2944 aa		5.4	□□□□□ -1.55
GARNL3-218	ENST00000487565	TRAV10	A0A0B4J240	114 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565		K7EQD1	137 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	CRYGD	P07320	174 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	GATA1	P15976	413 aa	Predicted RBP	5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	RAB5A	P20339	215 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	RHOH	Q15669	191 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	FAM104B	Q5XKR9	115 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	UFSP1	Q6NVU6	142 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	POM121L12	Q8N7R1	296 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	FRZB	Q92765	325 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	MRAP2	Q96G30	205 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	GNB1L	Q9BYB4	327 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	KIF25-AS1	Q9Y6Z4	181 aa		5.39	□□□□□ -1.55
GARNL3-218	ENST00000487565	DEFB131B	A0A096LNP1	70 aa		5.38	□□□□□ -1.55
GARNL3-218	ENST00000487565	TRAV26-2	A0A0B4J265	109 aa		5.38	□□□□□ -1.55
GARNL3-218	ENST00000487565	NCR2	O95944	276 aa		5.38	□□□□□ -1.55
GARNL3-218	ENST00000487565	APCS	P02743	223 aa		5.38	□□□□□ -1.55
GARNL3-218	ENST00000487565	RPS10	P46783	165 aa	Known RBP	5.38	□□□□□ -1.55
GARNL3-218	ENST00000487565	LINC00315	P59091	139 aa		5.38	□□□□□ -1.55
GARNL3-218	ENST00000487565	SLA	Q13239	276 aa		5.38	□□□□□ -1.55
GARNL3-218	ENST00000487565	RNF185	Q96GF1	192 aa		5.38	□□□□□ -1.55
GARNL3-218	ENST00000487565	PRO0255	Q9UI72	69 aa		5.38	□□□□□ -1.55
GARNL3-218	ENST00000487565	TRAPPC1	Q9Y5R8	145 aa		5.38	□□□□□ -1.55
GARNL3-218	ENST00000487565	MUC4	Q99102	2169 aa		5.38	□□□□□ -1.55
GARNL3-218	ENST00000487565	TRAV26-1	A0A087WT03	109 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	TRBV6-4	A0A1B0GX49	114 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	COLCA2	A8K830	154 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565		D6R8Y8	96 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	SMKR1	H3BMG3	65 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	PPBP	P02775	128 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	RAB4A	P20338	218 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	CKS2	P33552	79 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	FABP9	Q0Z7S8	132 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	MRPL51	Q4U2R6	128 aa	Known RBP	5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	OR10J3	Q5JRS4	329 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	ORMDL3	Q8N138	153 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	SLC25A29	Q8N8R3	303 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	PRADC1	Q9BSG0	188 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565	TG	P01266	2768 aa		5.37	□□□□□ -1.55
GARNL3-218	ENST00000487565		A0A0J9YY99	117 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565	TRBV10-1	A0A0K0K1A3	114 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565	NUPR2	A6NF83	97 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565		M0QY20	66 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565	PPP1R17	O96001	155 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565		P0DMU3	169 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565	FAM231A	P0DMU4	169 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565	FAM231C	P0DMU5	169 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565	CRYBA4	P53673	196 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565	PHLDA1	Q8WV24	401 aa	Predicted RBP	5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565	PRELID3A	Q96N28	172 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565	HHLA3	Q9XRX5	114 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565	ICOS	Q9Y6W8	199 aa		5.36	□□□□□ -1.55
GARNL3-218	ENST00000487565	GAGE12J	A6NER3	117 aa		5.35	□□□□□ -1.55
GARNL3-218	ENST00000487565	RPL36A	P83881	106 aa	Known RBP	5.35	□□□□□ -1.55
GARNL3-218	ENST00000487565	GAGE1	Q13065	139 aa		5.35	□□□□□ -1.55
GARNL3-218	ENST00000487565	GAGE4	Q13068	117 aa		5.35	□□□□□ -1.55
GARNL3-218	ENST00000487565	GAGE5	Q13069	117 aa		5.35	□□□□□ -1.55
GARNL3-218	ENST00000487565	KIAA1644	Q3SXP7	199 aa		5.35	□□□□□ -1.55
GARNL3-218	ENST00000487565	NEXN-AS1	Q8NBZ9	246 aa		5.35	□□□□□ -1.55
GARNL3-218	ENST00000487565	RPL36AL	Q969Q0	106 aa	Known RBP	5.35	□□□□□ -1.55
GARNL3-218	ENST00000487565	RPL39L	Q96EH5	51 aa	Known RBP	5.35	□□□□□ -1.55
GARNL3-218	ENST00000487565	LAMTOR2	Q9Y2Q5	125 aa		5.35	□□□□□ -1.55
GARNL3-218	ENST00000487565	LOC100131303	A0A0U1RQF7	123 aa		5.34	□□□□□ -1.55
GARNL3-218	ENST00000487565		H3BNG1	76 aa		5.34	□□□□□ -1.55
GARNL3-218	ENST00000487565	PHOX2A	O14813	284 aa		5.34	□□□□□ -1.55
GARNL3-218	ENST00000487565	NPY	P01303	97 aa		5.34	□□□□□ -1.55
GARNL3-218	ENST00000487565	SRI	P30626	198 aa		5.34	□□□□□ -1.55
GARNL3-218	ENST00000487565	NRAC	Q8N912	160 aa		5.34	□□□□□ -1.55

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