RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 UFSP1Q6NVU6 142 aa13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 TRPT1Q86TN4 253 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 TMEM141Q96I45 108 aa13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 AGRNO00468 2067 aa13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 MYMXA0A1B0GTQ4 84 aa13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 RBMY1A1P0DJD3 496 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 RBMY1CP0DJD4 496 aa13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 RBMY1FQ15415 496 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 TIMM17AQ99595 171 aa13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 NAA38Q9BRA0 125 aaKnown RBP13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 ZNF256Q9Y2P7 627 aaPredicted RBP13.25□□□□□ -0.29
PDLIM7-207ENST00000486828 K7EP34 96 aa13.24□□□□□ -0.29
PDLIM7-207ENST00000486828 RPL39P62891 51 aaKnown RBP13.24□□□□□ -0.29
PDLIM7-207ENST00000486828 A0A1W2PPM0 123 aa13.23□□□□□ -0.29
PDLIM7-207ENST00000486828 H3BMM0 161 aa13.23□□□□□ -0.29
PDLIM7-207ENST00000486828 PMVKQ15126 192 aa13.23□□□□□ -0.29
PDLIM7-207ENST00000486828 TMEM86BQ8N661 226 aa13.23□□□□□ -0.29
PDLIM7-207ENST00000486828 DEFB104AQ8WTQ1 72 aa13.23□□□□□ -0.29
PDLIM7-207ENST00000486828 IGLV4-69A0A075B6H9 119 aa13.23□□□□□ -0.29
PDLIM7-207ENST00000486828 GAGE12BA1L429 117 aa13.23□□□□□ -0.29
PDLIM7-207ENST00000486828 PAPPA-AS1Q5QFB9 102 aa13.23□□□□□ -0.29
PDLIM7-207ENST00000486828 TMEM61Q8N0U2 210 aa13.23□□□□□ -0.29
PDLIM7-207ENST00000486828 PRADC1Q9BSG0 188 aa13.23□□□□□ -0.29
PDLIM7-207ENST00000486828 RHOHQ15669 191 aa13.22□□□□□ -0.29
PDLIM7-207ENST00000486828 KHDC1LQ5JSQ8 128 aa13.22□□□□□ -0.29
PDLIM7-207ENST00000486828 PHLDA1Q8WV24 401 aaPredicted RBP13.22□□□□□ -0.29
PDLIM7-207ENST00000486828 DUX3Q96PT4 197 aa13.22□□□□□ -0.29
PDLIM7-207ENST00000486828 NSUN5P1Q3KNT7 163 aa13.21□□□□□ -0.29
PDLIM7-207ENST00000486828 DLX4Q92988 240 aaPredicted RBP13.21□□□□□ -0.29
PDLIM7-207ENST00000486828 CST9LQ9H4G1 147 aa13.21□□□□□ -0.29
PDLIM7-207ENST00000486828 NHP2Q9NX24 153 aaKnown RBP13.21□□□□□ -0.29
PDLIM7-207ENST00000486828 RBMY1BA6NDE4 496 aaKnown RBP13.21□□□□□ -0.3
PDLIM7-207ENST00000486828 RBMY1EA6NEQ0 496 aaKnown RBP13.21□□□□□ -0.3
PDLIM7-207ENST00000486828 RBMY1DP0C7P1 496 aaKnown RBP13.21□□□□□ -0.3
PDLIM7-207ENST00000486828 HIST1H4GQ99525 98 aa13.21□□□□□ -0.3
PDLIM7-207ENST00000486828 MAST4O15021 2626 aa13.2□□□□□ -0.3
PDLIM7-207ENST00000486828 TRBV7-3A0A075B6L6 115 aa13.2□□□□□ -0.3
PDLIM7-207ENST00000486828 C11orf86A6NJI1 115 aa13.2□□□□□ -0.3
PDLIM7-207ENST00000486828 K7ERJ3 54 aa13.2□□□□□ -0.3
PDLIM7-207ENST00000486828 SAMD5Q5TGI4 173 aa13.2□□□□□ -0.3
PDLIM7-207ENST00000486828 KLHL30-AS1Q8NEE0 82 aa13.2□□□□□ -0.3
PDLIM7-207ENST00000486828 TEX29Q8N6K0 151 aa13.19□□□□□ -0.3
PDLIM7-207ENST00000486828 DYNLRB2Q8TF09 96 aa13.19□□□□□ -0.3
PDLIM7-207ENST00000486828 CLUHP3Q96NS8 147 aa13.19□□□□□ -0.3
PDLIM7-207ENST00000486828 FABP2P12104 132 aa13.19□□□□□ -0.3
PDLIM7-207ENST00000486828 Q6ZSV7 163 aa13.19□□□□□ -0.3
PDLIM7-207ENST00000486828 SPAG8Q99932 426 aaPredicted RBP13.19□□□□□ -0.3
PDLIM7-207ENST00000486828 MAP6D1Q9H9H5 199 aa13.19□□□□□ -0.3
PDLIM7-207ENST00000486828 EDA2RQ9HAV5 297 aa13.19□□□□□ -0.3
PDLIM7-207ENST00000486828 SPCS1Q9Y6A9 102 aa13.19□□□□□ -0.3
PDLIM7-207ENST00000486828 SONP18583 2426 aaKnown RBP13.18□□□□□ -0.3
PDLIM7-207ENST00000486828 I3L3M4 83 aa13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 HTN1P15515 57 aa13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 HERVK_113P61574 105 aa13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 DEFB114Q30KQ6 69 aa13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 OR5A1Q8NGJ0 315 aa13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 HIVEP1P15822 2718 aa13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 ZNF815PA8K554 130 aa13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 P0DMU3 169 aa13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 FAM231AP0DMU4 169 aa13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 FAM231CP0DMU5 169 aa13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 EMP1P54849 157 aa13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 CD300EQ496F6 205 aaPredicted RBP13.17□□□□□ -0.3
PDLIM7-207ENST00000486828 OCIAD2Q56VL3 154 aa13.16□□□□□ -0.3
PDLIM7-207ENST00000486828 DNAJC9-AS1A6NH13 148 aa13.15□□□□□ -0.3
PDLIM7-207ENST00000486828 SCGB2A2Q13296 93 aa13.15□□□□□ -0.3
PDLIM7-207ENST00000486828 C12orf74Q32Q52 190 aa13.15□□□□□ -0.3
PDLIM7-207ENST00000486828 PIK3CD-AS1Q5SR53 167 aa13.15□□□□□ -0.3
PDLIM7-207ENST00000486828 C20orf203Q8NBC4 194 aa13.15□□□□□ -0.3
PDLIM7-207ENST00000486828 SORL1Q92673 2214 aa13.15□□□□□ -0.3
PDLIM7-207ENST00000486828 M0R2P5 195 aa13.15□□□□□ -0.3
PDLIM7-207ENST00000486828 ZNF415Q09FC8 603 aa13.15□□□□□ -0.3
PDLIM7-207ENST00000486828 A8MWV9 139 aa13.14□□□□□ -0.31
PDLIM7-207ENST00000486828 HIST2H2BDQ6DRA6 164 aa13.14□□□□□ -0.31
PDLIM7-207ENST00000486828 ZNRF2Q8NHG8 242 aa13.14□□□□□ -0.31
PDLIM7-207ENST00000486828 PTH2Q96A98 100 aa13.14□□□□□ -0.31
PDLIM7-207ENST00000486828 LINC00467Q9BRT7 94 aa13.14□□□□□ -0.31
PDLIM7-207ENST00000486828 MXRA5Q9NR99 2828 aa13.14□□□□□ -0.31
PDLIM7-207ENST00000486828 A0A1B0GWB2 263 aa13.13□□□□□ -0.31
PDLIM7-207ENST00000486828 RAX2Q96IS3 184 aa13.13□□□□□ -0.31
PDLIM7-207ENST00000486828 IGLL5B9A064 214 aa13.13□□□□□ -0.31
PDLIM7-207ENST00000486828 SCGB1D4Q6XE38 83 aa13.13□□□□□ -0.31
PDLIM7-207ENST00000486828 NFE4Q86UQ8 179 aa13.13□□□□□ -0.31
PDLIM7-207ENST00000486828 PLEKHB2Q96CS7 222 aa13.13□□□□□ -0.31
PDLIM7-207ENST00000486828 IGHV3-73A0A0B4J1V6 119 aa13.12□□□□□ -0.31
PDLIM7-207ENST00000486828 PRM2P04554 102 aa13.12□□□□□ -0.31
PDLIM7-207ENST00000486828 TMEM170BQ5T4T1 132 aa13.12□□□□□ -0.31
PDLIM7-207ENST00000486828 OPRPNQ99935 248 aaPredicted RBP13.12□□□□□ -0.31
PDLIM7-207ENST00000486828 MTORP42345 2549 aa13.12□□□□□ -0.31
PDLIM7-207ENST00000486828 PROK1P58294 105 aa13.11□□□□□ -0.31
PDLIM7-207ENST00000486828 KRTAP1-1Q07627 177 aa13.11□□□□□ -0.31
PDLIM7-207ENST00000486828 LINC01587Q99440 93 aa13.11□□□□□ -0.31
PDLIM7-207ENST00000486828 TRAV25A0A0B4J276 109 aa13.1□□□□□ -0.31
PDLIM7-207ENST00000486828 INSP01308 110 aa13.1□□□□□ -0.31
PDLIM7-207ENST00000486828 FHL3Q13643 280 aa13.1□□□□□ -0.31
PDLIM7-207ENST00000486828 C11orf72Q8NBR9 251 aa13.1□□□□□ -0.31
PDLIM7-207ENST00000486828 IGLV4-3A0A075B6K6 122 aa13.09□□□□□ -0.31
PDLIM7-207ENST00000486828 ZNF479Q96JC4 524 aa13.09□□□□□ -0.31
PDLIM7-207ENST00000486828 ESM1Q9NQ30 184 aa13.09□□□□□ -0.31
PDLIM7-207ENST00000486828 TSPEAR-AS2P59090 65 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms