RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 NEXN-AS1Q8NBZ9 246 aa12.25□□□□□ -0.45
CHMP3-207ENST00000485465 MRPL18Q9H0U6 180 aaKnown RBP12.25□□□□□ -0.45
CHMP3-207ENST00000485465 NIT2Q9NQR4 276 aa12.25□□□□□ -0.45
CHMP3-207ENST00000485465 GAGE12JA6NER3 117 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 D6R8Y8 96 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 PPBPP02775 128 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 GAGE1Q13065 139 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 GAGE4Q13068 117 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 GAGE5Q13069 117 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 GAGE13Q4V321 117 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 C15orf53Q8NAA6 179 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 ZNRF2Q8NHG8 242 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 RPL39LQ96EH5 51 aaKnown RBP12.24□□□□□ -0.45
CHMP3-207ENST00000485465 DNAJC30Q96LL9 226 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 TRAPPC1Q9Y5R8 145 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 ICOSQ9Y6W8 199 aa12.24□□□□□ -0.45
CHMP3-207ENST00000485465 TRBV7-3A0A075B6L6 115 aa12.23□□□□□ -0.45
CHMP3-207ENST00000485465 A0A096LPF7 62 aa12.23□□□□□ -0.45
CHMP3-207ENST00000485465 NUDT3O95989 172 aa12.23□□□□□ -0.45
CHMP3-207ENST00000485465 RPS10P46783 165 aaKnown RBP12.23□□□□□ -0.45
CHMP3-207ENST00000485465 RPL36AP83881 106 aaKnown RBP12.23□□□□□ -0.45
CHMP3-207ENST00000485465 FABP9Q0Z7S8 132 aa12.23□□□□□ -0.45
CHMP3-207ENST00000485465 MRPL23Q16540 153 aaKnown RBP12.23□□□□□ -0.45
CHMP3-207ENST00000485465 ORMDL3Q8N138 153 aa12.23□□□□□ -0.45
CHMP3-207ENST00000485465 RPL36ALQ969Q0 106 aaKnown RBP12.23□□□□□ -0.45
CHMP3-207ENST00000485465 TNFRSF18Q9Y5U5 241 aa12.23□□□□□ -0.45
CHMP3-207ENST00000485465 C3orf84H3BNL1 204 aa12.22□□□□□ -0.45
CHMP3-207ENST00000485465 PPP1R17O96001 155 aa12.22□□□□□ -0.45
CHMP3-207ENST00000485465 LINC00694P0DN24 101 aa12.22□□□□□ -0.45
CHMP3-207ENST00000485465 RAB5AP20339 215 aa12.22□□□□□ -0.45
CHMP3-207ENST00000485465 KIAA1644Q3SXP7 199 aa12.22□□□□□ -0.45
CHMP3-207ENST00000485465 OR10J3Q5JRS4 329 aa12.22□□□□□ -0.45
CHMP3-207ENST00000485465 NRACQ8N912 160 aa12.22□□□□□ -0.45
CHMP3-207ENST00000485465 SRIP30626 198 aa12.21□□□□□ -0.45
CHMP3-207ENST00000485465 PRELID3AQ96N28 172 aa12.21□□□□□ -0.45
CHMP3-207ENST00000485465 APLNQ9ULZ1 77 aa12.21□□□□□ -0.45
CHMP3-207ENST00000485465 CSMD3Q7Z407 3707 aa12.21□□□□□ -0.46
CHMP3-207ENST00000485465 TRBV6-5A0A0K0K1A5 114 aa12.2□□□□□ -0.46
CHMP3-207ENST00000485465 TCTAP57738 103 aa12.2□□□□□ -0.46
CHMP3-207ENST00000485465 UBE2D3P61077 147 aa12.2□□□□□ -0.46
CHMP3-207ENST00000485465 UBE2D2P62837 147 aa12.2□□□□□ -0.46
CHMP3-207ENST00000485465 SH2D6Q7Z4S9 175 aa12.2□□□□□ -0.46
CHMP3-207ENST00000485465 TNFRSF6BO95407 300 aa12.19□□□□□ -0.46
CHMP3-207ENST00000485465 NPYP01303 97 aa12.19□□□□□ -0.46
CHMP3-207ENST00000485465 CASC10Q5T4H9 136 aa12.19□□□□□ -0.46
CHMP3-207ENST00000485465 NEGR1Q7Z3B1 354 aa12.19□□□□□ -0.46
CHMP3-207ENST00000485465 ATP6V0E2Q8NHE4 81 aa12.19□□□□□ -0.46
CHMP3-207ENST00000485465 ST20Q9HBF5 79 aa12.19□□□□□ -0.46
CHMP3-207ENST00000485465 PHOX2AO14813 284 aa12.18□□□□□ -0.46
CHMP3-207ENST00000485465 LAMTOR2Q9Y2Q5 125 aa12.18□□□□□ -0.46
CHMP3-207ENST00000485465 STARD9Q9P2P6 4700 aa12.18□□□□□ -0.46
CHMP3-207ENST00000485465 SDHAF1A6NFY7 115 aa12.17□□□□□ -0.46
CHMP3-207ENST00000485465 SUMO2P61956 95 aaKnown RBP12.17□□□□□ -0.46
CHMP3-207ENST00000485465 C20orf78Q9BR46 151 aa12.17□□□□□ -0.46
CHMP3-207ENST00000485465 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
CHMP3-207ENST00000485465 TRGC2P03986 189 aa12.16□□□□□ -0.46
CHMP3-207ENST00000485465 POLR2KP53803 58 aaKnown RBP12.16□□□□□ -0.46
CHMP3-207ENST00000485465 DAZ4Q86SG3 579 aaKnown RBP12.16□□□□□ -0.46
CHMP3-207ENST00000485465 TMEM70Q9BUB7 260 aa12.16□□□□□ -0.46
CHMP3-207ENST00000485465 DAZ3Q9NR90 486 aaKnown RBP12.16□□□□□ -0.46
CHMP3-207ENST00000485465 IGHV3-38A0A0C4DH36 116 aa12.15□□□□□ -0.46
CHMP3-207ENST00000485465 LYPD5Q6UWN5 251 aa12.15□□□□□ -0.46
CHMP3-207ENST00000485465 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.15□□□□□ -0.46
CHMP3-207ENST00000485465 GTSF1LQ9H1H1 148 aa12.15□□□□□ -0.46
CHMP3-207ENST00000485465 PRSS47A8MTI9 375 aa12.14□□□□□ -0.47
CHMP3-207ENST00000485465 RPL32P62910 135 aaKnown RBP12.14□□□□□ -0.47
CHMP3-207ENST00000485465 ESRGQ1W209 222 aa12.14□□□□□ -0.47
CHMP3-207ENST00000485465 MAP1LC3AQ9H492 121 aa12.14□□□□□ -0.47
CHMP3-207ENST00000485465 PLECQ15149 4684 aaKnown RBP12.13□□□□□ -0.47
CHMP3-207ENST00000485465 TRBV27A0A0K0K1C4 114 aa12.13□□□□□ -0.47
CHMP3-207ENST00000485465 I3L3M4 83 aa12.13□□□□□ -0.47
CHMP3-207ENST00000485465 VCYO14598 125 aa12.13□□□□□ -0.47
CHMP3-207ENST00000485465 PMCHP20382 165 aa12.13□□□□□ -0.47
CHMP3-207ENST00000485465 TIRAPP58753 221 aa12.13□□□□□ -0.47
CHMP3-207ENST00000485465 LOC389332A0A1B0GUA5 103 aa12.12□□□□□ -0.47
CHMP3-207ENST00000485465 SMIM2Q9BVW6 85 aa12.12□□□□□ -0.47
CHMP3-207ENST00000485465 TMEM97Q5BJF2 176 aa12.11□□□□□ -0.47
CHMP3-207ENST00000485465 DEFB104AQ8WTQ1 72 aa12.11□□□□□ -0.47
CHMP3-207ENST00000485465 CCL18P55774 89 aa12.1□□□□□ -0.47
CHMP3-207ENST00000485465 COTL1Q14019 142 aa12.1□□□□□ -0.47
CHMP3-207ENST00000485465 NTM-AS1Q6ZSK4 140 aa12.1□□□□□ -0.47
CHMP3-207ENST00000485465 IGLV2-18A0A075B6J9 118 aa12.09□□□□□ -0.47
CHMP3-207ENST00000485465 TSHBP01222 138 aa12.09□□□□□ -0.47
CHMP3-207ENST00000485465 LELP1Q5T871 98 aa12.09□□□□□ -0.47
CHMP3-207ENST00000485465 Q8N8P6 123 aa12.09□□□□□ -0.47
CHMP3-207ENST00000485465 KIR2DL4Q99706 377 aa12.09□□□□□ -0.47
CHMP3-207ENST00000485465 LINC00588Q9Y4M8 146 aa12.09□□□□□ -0.47
CHMP3-207ENST00000485465 TRBV6-8A0A0A6YYG3 113 aa12.08□□□□□ -0.48
CHMP3-207ENST00000485465 IFI27P40305 119 aaPredicted RBP12.08□□□□□ -0.48
CHMP3-207ENST00000485465 IQCJQ1A5X6 159 aa12.08□□□□□ -0.48
CHMP3-207ENST00000485465 C18orf32Q8TCD1 76 aa12.08□□□□□ -0.48
CHMP3-207ENST00000485465 NXT2Q9NPJ8 142 aaKnown RBP12.08□□□□□ -0.48
CHMP3-207ENST00000485465 PRSS3P2Q8NHM4 247 aa12.07□□□□□ -0.48
CHMP3-207ENST00000485465 MRPS16Q9Y3D3 137 aaKnown RBP12.07□□□□□ -0.48
CHMP3-207ENST00000485465 TRBV25-1A0A075B6N4 114 aa12.06□□□□□ -0.48
CHMP3-207ENST00000485465 IGHV1-24A0A0C4DH33 117 aa12.06□□□□□ -0.48
CHMP3-207ENST00000485465 TCAPO15273 167 aa12.06□□□□□ -0.48
CHMP3-207ENST00000485465 FCER1GP30273 86 aa12.06□□□□□ -0.48
CHMP3-207ENST00000485465 UBE2DNLQ8IWF7 75 aa12.06□□□□□ -0.48
CHMP3-207ENST00000485465 TENM2Q9NT68 2774 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms