RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 KIAA1644Q3SXP7 199 aa9.53□□□□□ -0.88
SMARCAL1-211ENST00000479008 ZFAND6Q6FIF0 208 aa9.53□□□□□ -0.88
SMARCAL1-211ENST00000479008 NEXN-AS1Q8NBZ9 246 aa9.53□□□□□ -0.88
SMARCAL1-211ENST00000479008 MUC7Q8TAX7 377 aa9.53□□□□□ -0.88
SMARCAL1-211ENST00000479008 RPL39LQ96EH5 51 aaKnown RBP9.53□□□□□ -0.88
SMARCAL1-211ENST00000479008 GAGE12JA6NER3 117 aa9.52□□□□□ -0.89
SMARCAL1-211ENST00000479008 RAB5AP20339 215 aa9.52□□□□□ -0.89
SMARCAL1-211ENST00000479008 GAGE1Q13065 139 aa9.52□□□□□ -0.89
SMARCAL1-211ENST00000479008 GAGE4Q13068 117 aa9.52□□□□□ -0.89
SMARCAL1-211ENST00000479008 GAGE5Q13069 117 aa9.52□□□□□ -0.89
SMARCAL1-211ENST00000479008 GAGE13Q4V321 117 aa9.52□□□□□ -0.89
SMARCAL1-211ENST00000479008 OR10J3Q5JRS4 329 aa9.52□□□□□ -0.89
SMARCAL1-211ENST00000479008 ORMDL3Q8N138 153 aa9.52□□□□□ -0.89
SMARCAL1-211ENST00000479008 H3BNG1 76 aa9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 NUDT3O95989 172 aa9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 PPBPP02775 128 aa9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 RPL36AP83881 106 aaKnown RBP9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 ZNRF2Q8NHG8 242 aa9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 RPL36ALQ969Q0 106 aaKnown RBP9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 DNAJC30Q96LL9 226 aa9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 PRELID3AQ96N28 172 aa9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 NIT2Q9NQR4 276 aa9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 KLK5Q9Y337 293 aaPredicted RBP9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 TNFRSF18Q9Y5U5 241 aa9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 ICOSQ9Y6W8 199 aa9.51□□□□□ -0.89
SMARCAL1-211ENST00000479008 DYNC2H1Q8NCM8 4307 aaKnown RBP9.5□□□□□ -0.89
SMARCAL1-211ENST00000479008 A0A096LPF7 62 aa9.5□□□□□ -0.89
SMARCAL1-211ENST00000479008 NPYP01303 97 aa9.5□□□□□ -0.89
SMARCAL1-211ENST00000479008 NRACQ8N912 160 aa9.5□□□□□ -0.89
SMARCAL1-211ENST00000479008 TRBV7-3A0A075B6L6 115 aa9.49□□□□□ -0.89
SMARCAL1-211ENST00000479008 TNFRSF6BO95407 300 aa9.49□□□□□ -0.89
SMARCAL1-211ENST00000479008 PPP1R17O96001 155 aa9.49□□□□□ -0.89
SMARCAL1-211ENST00000479008 TRGC2P03986 189 aa9.49□□□□□ -0.89
SMARCAL1-211ENST00000479008 SRIP30626 198 aa9.49□□□□□ -0.89
SMARCAL1-211ENST00000479008 MRPL23Q16540 153 aaKnown RBP9.49□□□□□ -0.89
SMARCAL1-211ENST00000479008 C15orf53Q8NAA6 179 aa9.49□□□□□ -0.89
SMARCAL1-211ENST00000479008 TRBV6-5A0A0K0K1A5 114 aa9.48□□□□□ -0.89
SMARCAL1-211ENST00000479008 LINC00694P0DN24 101 aa9.48□□□□□ -0.89
SMARCAL1-211ENST00000479008 UBE2D3P61077 147 aa9.48□□□□□ -0.89
SMARCAL1-211ENST00000479008 UBE2D2P62837 147 aa9.48□□□□□ -0.89
SMARCAL1-211ENST00000479008 ST20Q9HBF5 79 aa9.48□□□□□ -0.89
SMARCAL1-211ENST00000479008 IGHV3-38A0A0C4DH36 116 aa9.47□□□□□ -0.89
SMARCAL1-211ENST00000479008 PHOX2AO14813 284 aa9.47□□□□□ -0.89
SMARCAL1-211ENST00000479008 SUMO2P61956 95 aaKnown RBP9.47□□□□□ -0.89
SMARCAL1-211ENST00000479008 ATP6V0E2Q8NHE4 81 aa9.47□□□□□ -0.89
SMARCAL1-211ENST00000479008 ALKBH7Q9BT30 221 aaPredicted RBP9.47□□□□□ -0.89
SMARCAL1-211ENST00000479008 LAMTOR2Q9Y2Q5 125 aa9.47□□□□□ -0.89
SMARCAL1-211ENST00000479008 SDHAF1A6NFY7 115 aa9.46□□□□□ -0.9
SMARCAL1-211ENST00000479008 NEGR1Q7Z3B1 354 aa9.46□□□□□ -0.9
SMARCAL1-211ENST00000479008 TMEM70Q9BUB7 260 aa9.46□□□□□ -0.9
SMARCAL1-211ENST00000479008 APLNQ9ULZ1 77 aa9.46□□□□□ -0.9
SMARCAL1-211ENST00000479008 LOC389332A0A1B0GUA5 103 aa9.45□□□□□ -0.9
SMARCAL1-211ENST00000479008 C3orf84H3BNL1 204 aa9.45□□□□□ -0.9
SMARCAL1-211ENST00000479008 POLR2KP53803 58 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-211ENST00000479008 SH2D6Q7Z4S9 175 aa9.45□□□□□ -0.9
SMARCAL1-211ENST00000479008 DAZ4Q86SG3 579 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-211ENST00000479008 DEFB104AQ8WTQ1 72 aa9.45□□□□□ -0.9
SMARCAL1-211ENST00000479008 C20orf78Q9BR46 151 aa9.45□□□□□ -0.9
SMARCAL1-211ENST00000479008 MAP1LC3AQ9H492 121 aa9.45□□□□□ -0.9
SMARCAL1-211ENST00000479008 DAZ3Q9NR90 486 aaKnown RBP9.45□□□□□ -0.9
SMARCAL1-211ENST00000479008 PMCHP20382 165 aa9.44□□□□□ -0.9
SMARCAL1-211ENST00000479008 TCTAP57738 103 aa9.44□□□□□ -0.9
SMARCAL1-211ENST00000479008 SMIM2Q9BVW6 85 aa9.44□□□□□ -0.9
SMARCAL1-211ENST00000479008 STARD9Q9P2P6 4700 aa9.43□□□□□ -0.9
SMARCAL1-211ENST00000479008 I3L3M4 83 aa9.43□□□□□ -0.9
SMARCAL1-211ENST00000479008 VCYO14598 125 aa9.43□□□□□ -0.9
SMARCAL1-211ENST00000479008 IQCJQ1A5X6 159 aa9.43□□□□□ -0.9
SMARCAL1-211ENST00000479008 CASC10Q5T4H9 136 aa9.43□□□□□ -0.9
SMARCAL1-211ENST00000479008 GTSF1LQ9H1H1 148 aa9.43□□□□□ -0.9
SMARCAL1-211ENST00000479008 CSMD3Q7Z407 3707 aa9.42□□□□□ -0.9
SMARCAL1-211ENST00000479008 TRBV27A0A0K0K1C4 114 aa9.42□□□□□ -0.9
SMARCAL1-211ENST00000479008 RPL32P62910 135 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-211ENST00000479008 ESRGQ1W209 222 aa9.42□□□□□ -0.9
SMARCAL1-211ENST00000479008 LYPD5Q6UWN5 251 aa9.42□□□□□ -0.9
SMARCAL1-211ENST00000479008 C18orf32Q8TCD1 76 aa9.42□□□□□ -0.9
SMARCAL1-211ENST00000479008 PRSS47A8MTI9 375 aa9.41□□□□□ -0.9
SMARCAL1-211ENST00000479008 IFI27P40305 119 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-211ENST00000479008 COTL1Q14019 142 aa9.41□□□□□ -0.9
SMARCAL1-211ENST00000479008 PLECQ15149 4684 aaKnown RBP9.4□□□□□ -0.9
SMARCAL1-211ENST00000479008 IGLV2-18A0A075B6J9 118 aa9.4□□□□□ -0.9
SMARCAL1-211ENST00000479008 TSHBP01222 138 aa9.4□□□□□ -0.9
SMARCAL1-211ENST00000479008 TIRAPP58753 221 aa9.4□□□□□ -0.9
SMARCAL1-211ENST00000479008 TMEM97Q5BJF2 176 aa9.4□□□□□ -0.9
SMARCAL1-211ENST00000479008 NTM-AS1Q6ZSK4 140 aa9.4□□□□□ -0.9
SMARCAL1-211ENST00000479008 Q8N8P6 123 aa9.4□□□□□ -0.9
SMARCAL1-211ENST00000479008 PRSS3P2Q8NHM4 247 aa9.4□□□□□ -0.9
SMARCAL1-211ENST00000479008 KIR2DL4Q99706 377 aa9.4□□□□□ -0.9
SMARCAL1-211ENST00000479008 C1orf196B1AJZ1 125 aa9.39□□□□□ -0.91
SMARCAL1-211ENST00000479008 TCAPO15273 167 aa9.39□□□□□ -0.91
SMARCAL1-211ENST00000479008 FCER1GP30273 86 aa9.39□□□□□ -0.91
SMARCAL1-211ENST00000479008 CCL18P55774 89 aa9.39□□□□□ -0.91
SMARCAL1-211ENST00000479008 LELP1Q5T871 98 aa9.39□□□□□ -0.91
SMARCAL1-211ENST00000479008 NXT2Q9NPJ8 142 aaKnown RBP9.39□□□□□ -0.91
SMARCAL1-211ENST00000479008 TRBV25-1A0A075B6N4 114 aa9.38□□□□□ -0.91
SMARCAL1-211ENST00000479008 TRBV6-8A0A0A6YYG3 113 aa9.38□□□□□ -0.91
SMARCAL1-211ENST00000479008 IGHV1-24A0A0C4DH33 117 aa9.38□□□□□ -0.91
SMARCAL1-211ENST00000479008 AMTP48728 403 aa9.38□□□□□ -0.91
SMARCAL1-211ENST00000479008 FA2HQ7L5A8 372 aa9.38□□□□□ -0.91
SMARCAL1-211ENST00000479008 UBE2DNLQ8IWF7 75 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 206 ms