RNA–Protein interactions for RNA: ENST00000479003.5

CHKB-208, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-208ENST00000479003 LINC01549A6NIU2 74 aa20.34■□□□□ 0.85
CHKB-208ENST00000479003 IGKV3-20P01619 116 aa20.34■□□□□ 0.85
CHKB-208ENST00000479003 RIPPLY3P57055 190 aa20.33■□□□□ 0.85
CHKB-208ENST00000479003 C4orf3Q8WVX3 66 aa20.33■□□□□ 0.85
CHKB-208ENST00000479003 CYSRT1A8MQ03 144 aa20.33■□□□□ 0.84
CHKB-208ENST00000479003 VCYO14598 125 aa20.33■□□□□ 0.84
CHKB-208ENST00000479003 DUSP14O95147 198 aaKnown RBP20.33■□□□□ 0.84
CHKB-208ENST00000479003 MDFICQ9P1T7 246 aa20.33■□□□□ 0.84
CHKB-208ENST00000479003 OR11H12B2RN74 326 aa20.32■□□□□ 0.84
CHKB-208ENST00000479003 ZFP2Q6ZN57 461 aa20.32■□□□□ 0.84
CHKB-208ENST00000479003 OR11H1Q8NG94 326 aa20.32■□□□□ 0.84
CHKB-208ENST00000479003 OR11H2Q8NH07 326 aa20.32■□□□□ 0.84
CHKB-208ENST00000479003 IGHV1OR15-1A0A075B7D0 117 aa20.32■□□□□ 0.84
CHKB-208ENST00000479003 TRBV6-5A0A0K0K1A5 114 aa20.32■□□□□ 0.84
CHKB-208ENST00000479003 F5H697 171 aa20.32■□□□□ 0.84
CHKB-208ENST00000479003 SYT8Q8NBV8 401 aa20.32■□□□□ 0.84
CHKB-208ENST00000479003 DUX3Q96PT4 197 aa20.32■□□□□ 0.84
CHKB-208ENST00000479003 CRLF1O75462 422 aa20.31■□□□□ 0.84
CHKB-208ENST00000479003 CD28P10747 220 aa20.31■□□□□ 0.84
CHKB-208ENST00000479003 SPINK13Q1W4C9 94 aa20.31■□□□□ 0.84
CHKB-208ENST00000479003 Q8N1Y9 231 aa20.31■□□□□ 0.84
CHKB-208ENST00000479003 KLHL30-AS1Q8NEE0 82 aa20.31■□□□□ 0.84
CHKB-208ENST00000479003 PHLDA1Q8WV24 401 aaPredicted RBP20.31■□□□□ 0.84
CHKB-208ENST00000479003 LINC01619G3V211 115 aa20.3■□□□□ 0.84
CHKB-208ENST00000479003 FOXI2Q6ZQN5 318 aa20.3■□□□□ 0.84
CHKB-208ENST00000479003 KIR2DL4Q99706 377 aa20.3■□□□□ 0.84
CHKB-208ENST00000479003 TP53TG1Q9Y2A0 90 aa20.3■□□□□ 0.84
CHKB-208ENST00000479003 E9PLD3 99 aa20.29■□□□□ 0.84
CHKB-208ENST00000479003 NDUFA7O95182 113 aa20.29■□□□□ 0.84
CHKB-208ENST00000479003 SLURP1P55000 103 aa20.29■□□□□ 0.84
CHKB-208ENST00000479003 MYMXA0A1B0GTQ4 84 aa20.29■□□□□ 0.84
CHKB-208ENST00000479003 SDHAF1A6NFY7 115 aa20.29■□□□□ 0.84
CHKB-208ENST00000479003 IGIPA6NJ69 53 aa20.29■□□□□ 0.84
CHKB-208ENST00000479003 TSHBP01222 138 aa20.29■□□□□ 0.84
CHKB-208ENST00000479003 CRYGDP07320 174 aa20.29■□□□□ 0.84
CHKB-208ENST00000479003 SAMD5Q5TGI4 173 aa20.29■□□□□ 0.84
CHKB-208ENST00000479003 AMTNQ6UX39 209 aa20.28■□□□□ 0.84
CHKB-208ENST00000479003 SPCS1Q9Y6A9 102 aa20.28■□□□□ 0.84
CHKB-208ENST00000479003 TRBV27A0A0K0K1C4 114 aa20.27■□□□□ 0.84
CHKB-208ENST00000479003 FABP2P12104 132 aa20.27■□□□□ 0.84
CHKB-208ENST00000479003 NHP2Q9NX24 153 aaKnown RBP20.27■□□□□ 0.84
CHKB-208ENST00000479003 AGRNO00468 2067 aa20.27■□□□□ 0.84
CHKB-208ENST00000479003 C2CD3Q4AC94 2353 aa20.27■□□□□ 0.84
CHKB-208ENST00000479003 FAM74A4Q5TZK3 123 aa20.27■□□□□ 0.84
CHKB-208ENST00000479003 A0A1W2PRX2 142 aa20.26■□□□□ 0.83
CHKB-208ENST00000479003 K7ERJ3 54 aa20.26■□□□□ 0.83
CHKB-208ENST00000479003 TMEM141Q96I45 108 aa20.26■□□□□ 0.83
CHKB-208ENST00000479003 CITED2Q99967 270 aaPredicted RBP20.26■□□□□ 0.83
CHKB-208ENST00000479003 TRBV7-3A0A075B6L6 115 aa20.25■□□□□ 0.83
CHKB-208ENST00000479003 TIMM17AQ99595 171 aa20.25■□□□□ 0.83
CHKB-208ENST00000479003 M0QY20 66 aa20.24■□□□□ 0.83
CHKB-208ENST00000479003 MORN3Q6PF18 240 aaPredicted RBP20.24■□□□□ 0.83
CHKB-208ENST00000479003 PRADC1Q9BSG0 188 aa20.24■□□□□ 0.83
CHKB-208ENST00000479003 HIST1H4GQ99525 98 aa20.24■□□□□ 0.83
CHKB-208ENST00000479003 IGLV4-69A0A075B6H9 119 aa20.23■□□□□ 0.83
CHKB-208ENST00000479003 PROK1P58294 105 aa20.23■□□□□ 0.83
CHKB-208ENST00000479003 PMVKQ15126 192 aa20.23■□□□□ 0.83
CHKB-208ENST00000479003 ZNF56Q15929 161 aa20.23■□□□□ 0.83
CHKB-208ENST00000479003 RPL39P62891 51 aaKnown RBP20.23■□□□□ 0.83
CHKB-208ENST00000479003 PAPPA-AS1Q5QFB9 102 aa20.23■□□□□ 0.83
CHKB-208ENST00000479003 NIPBLQ6KC79 2804 aaeCLIP20.23■□□□□ 0.83
CHKB-208ENST00000479003 TRGV11A0A075B6L2 103 aa20.22■□□□□ 0.83
CHKB-208ENST00000479003 DEFB104AQ8WTQ1 72 aa20.21■□□□□ 0.83
CHKB-208ENST00000479003 RAX2Q96IS3 184 aa20.21■□□□□ 0.83
CHKB-208ENST00000479003 TRPT1Q86TN4 253 aaKnown RBP20.2■□□□□ 0.82
CHKB-208ENST00000479003 ZNF256Q9Y2P7 627 aaPredicted RBP20.2■□□□□ 0.82
CHKB-208ENST00000479003 C11orf86A6NJI1 115 aa20.2■□□□□ 0.82
CHKB-208ENST00000479003 C12orf74Q32Q52 190 aa20.2■□□□□ 0.82
CHKB-208ENST00000479003 DLX4Q92988 240 aaPredicted RBP20.2■□□□□ 0.82
CHKB-208ENST00000479003 TSSC4Q9Y5U2 329 aaPredicted RBP20.2■□□□□ 0.82
CHKB-208ENST00000479003 A8MTW9 85 aa20.18■□□□□ 0.82
CHKB-208ENST00000479003 J3QR89 54 aa20.18■□□□□ 0.82
CHKB-208ENST00000479003 RHOHQ15669 191 aa20.18■□□□□ 0.82
CHKB-208ENST00000479003 NSUN5P1Q3KNT7 163 aa20.18■□□□□ 0.82
CHKB-208ENST00000479003 ZNF876PQ49A33 203 aa20.18■□□□□ 0.82
CHKB-208ENST00000479003 RBMY1A1P0DJD3 496 aaKnown RBP20.17■□□□□ 0.82
CHKB-208ENST00000479003 RBMY1CP0DJD4 496 aa20.17■□□□□ 0.82
CHKB-208ENST00000479003 RBMY1FQ15415 496 aaKnown RBP20.17■□□□□ 0.82
CHKB-208ENST00000479003 IGLL5B9A064 214 aa20.17■□□□□ 0.82
CHKB-208ENST00000479003 JMJD1CQ15652 2540 aa20.16■□□□□ 0.82
CHKB-208ENST00000479003 KNCNA6PVL3 124 aa20.16■□□□□ 0.82
CHKB-208ENST00000479003 ZNF815PA8K554 130 aa20.16■□□□□ 0.82
CHKB-208ENST00000479003 FHL3Q13643 280 aa20.15■□□□□ 0.82
CHKB-208ENST00000479003 CD300EQ496F6 205 aaPredicted RBP20.15■□□□□ 0.82
CHKB-208ENST00000479003 SIGMAR1Q99720 223 aa20.15■□□□□ 0.82
CHKB-208ENST00000479003 WNK1Q9H4A3 2382 aa20.15■□□□□ 0.82
CHKB-208ENST00000479003 TRAV2A0A0B4J234 112 aa20.15■□□□□ 0.82
CHKB-208ENST00000479003 A0A1B0GWB2 263 aa20.15■□□□□ 0.82
CHKB-208ENST00000479003 DEFB131AP59861 70 aa20.15■□□□□ 0.82
CHKB-208ENST00000479003 KRTAP10-3P60369 221 aa20.15■□□□□ 0.82
CHKB-208ENST00000479003 HERVK_113P61574 105 aa20.15■□□□□ 0.82
CHKB-208ENST00000479003 TEP1Q99973 2627 aaKnown RBP20.14■□□□□ 0.82
CHKB-208ENST00000479003 CCL24O00175 119 aa20.14■□□□□ 0.81
CHKB-208ENST00000479003 EMP1P54849 157 aa20.13■□□□□ 0.81
CHKB-208ENST00000479003 SVIPQ8NHG7 77 aa20.13■□□□□ 0.81
CHKB-208ENST00000479003 PEMTQ9UBM1 199 aa20.12■□□□□ 0.81
CHKB-208ENST00000479003 ADARB2-AS1A8MUL3 147 aa20.12■□□□□ 0.81
CHKB-208ENST00000479003 H3BMM0 161 aa20.12■□□□□ 0.81
CHKB-208ENST00000479003 EDA2RQ9HAV5 297 aa20.12■□□□□ 0.81
CHKB-208ENST00000479003 SORL1Q92673 2214 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms