RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 LEPROTO15243 131 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 BGLAPP02818 100 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 CHTF8P0CG12 524 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 CCL5P13501 91 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 EGFEM1PQ0D2K5 195 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 SYCNQ0VAF6 134 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 GTF3C1Q12789 2109 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 MRPL51Q4U2R6 128 aaKnown RBP1.62□□□□□ -2.15
XRN1-211ENST00000477237 Q6JHZ5 121 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 MIR17HGQ75NE6 70 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 CLECL1Q8IZS7 167 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 LINC00269Q8N2A0 174 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 FAM19A2Q8N3H0 131 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 PFN4Q8NHR9 129 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 SMCR5Q8TEV8 140 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 DYNLRB1Q9NP97 96 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 DHRS4-AS1Q9P1J3 65 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 PLXNA2O75051 1894 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 PTPRSQ13332 1948 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 DOCK11Q5JSL3 2073 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 DSCAML1Q8TD84 2053 aa1.62□□□□□ -2.15
XRN1-211ENST00000477237 DSCAMO60469 2012 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 TRAV7A0A075B6U4 112 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 TMSB15BA0A087X1C1 80 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 IGLV3-32A0A0A0MS00 114 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 IGHV7-81A0A0B4J1V7 117 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 IGHV3-72A0A0B4J1Y9 119 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 A0A0B4J2C4 111 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 A0A1B0GWA3 101 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 A6NIN4 97 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 IQCF6A8MYZ5 107 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 LEPROTL1O95214 131 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 WISP3O95389 354 aaPredicted RBP1.61□□□□□ -2.15
XRN1-211ENST00000477237 IGLV1-51P01701 117 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 HMGN2P05204 90 aaKnown RBP1.61□□□□□ -2.15
XRN1-211ENST00000477237 CCL3P10147 92 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 SMIM11AP58511 58 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 DYNLT1P63172 113 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 S100A7L2Q5SY68 101 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 SPANXN1Q5VSR9 72 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 Q96M85 177 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 BPESC1Q9GZL8 116 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 C11orf1Q9H5F2 150 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 LINC00574Q9H8X3 128 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 XAGE1AQ9HD64 81 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 NDUFA12Q9UI09 145 aa1.61□□□□□ -2.15
XRN1-211ENST00000477237 LRP4O75096 1905 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 PCNX2A6NKB5 2137 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 KIAA2026Q5HYC2 2103 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 BCORQ6W2J9 1755 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 THADAQ6YHU6 1953 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 TRBV25-1A0A075B6N4 114 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 B4DSR2 109 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 CGB3P0DN86 165 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 CGB7P0DN87 165 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 MIFP14174 115 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 ZNF22P17026 224 aaPredicted RBP1.6□□□□□ -2.15
XRN1-211ENST00000477237 NPPCP23582 126 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 RPL27AP46776 148 aaKnown RBP1.6□□□□□ -2.15
XRN1-211ENST00000477237 PRR4Q16378 134 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 CASC10Q5T4H9 136 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 Q5VV11 94 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 ZNF826PQ6ZT77 177 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 C20orf197Q8N268 126 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 ZFAND2AQ8N6M9 145 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 TMEM141Q96I45 108 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 FAM167A-AS1Q96KT0 104 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 TIMM21Q9BVV7 248 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 TTTY13Q9BZ97 58 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 PLA2G12AQ9BZM1 189 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 CYP4F30PQ9H0H9 118 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 LINC00597Q9H2U6 94 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 GNG13Q9P2W3 67 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 UBE2D4Q9Y2X8 147 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 ZNF831Q5JPB2 1677 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 LCTP09848 1927 aa1.6□□□□□ -2.15
XRN1-211ENST00000477237 EML5Q05BV3 1969 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 PCDH15Q96QU1 1955 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 COL4A1P02462 1669 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 IGHV3-74A0A0B4J1X5 117 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 IGHV3-43A0A0B4J1X8 118 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 TRAV22A0A0B4J277 110 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 IGHV3-35A0A0C4DH35 117 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 IGHV5-51A0A0C4DH38 117 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 TEX49A0A1B0GTD5 131 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 hDV103S1A0JD37 113 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 CEBPZOSA8MTT3 80 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 C5orf67F2Z3F1 127 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 F8WEM9 126 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 IGLV2-23P01705 113 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 COX7A1P24310 79 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 IFI27P40305 119 aaPredicted RBP1.59□□□□□ -2.15
XRN1-211ENST00000477237 TSPEAR-AS2P59090 65 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 ZNF117Q03924 483 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 PLGLAQ15195 96 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 ATXN8Q156A1 80 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 GDF5OSQ5U4N7 250 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 ATP5EP2Q5VTU8 51 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 LYPD2Q6UXB3 125 aa1.59□□□□□ -2.15
XRN1-211ENST00000477237 ORMDL3Q8N138 153 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms