RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ZNF56Q15929 161 aa6.99□□□□□ -1.29
COL8A1-206ENST00000474648 COX19Q49B96 90 aa6.99□□□□□ -1.29
COL8A1-206ENST00000474648 CEMP1Q6PRD7 247 aaPredicted RBP6.99□□□□□ -1.29
COL8A1-206ENST00000474648 WWC2-AS2Q96NR7 200 aa6.99□□□□□ -1.29
COL8A1-206ENST00000474648 NACAE9PAV3 2078 aa6.98□□□□□ -1.29
COL8A1-206ENST00000474648 A0A0J9YY99 117 aa6.98□□□□□ -1.29
COL8A1-206ENST00000474648 LOC100131303A0A0U1RQF7 123 aa6.98□□□□□ -1.29
COL8A1-206ENST00000474648 SMKR1H3BMG3 65 aa6.98□□□□□ -1.29
COL8A1-206ENST00000474648 K7EQD1 137 aa6.98□□□□□ -1.29
COL8A1-206ENST00000474648 PAX4O43316 350 aa6.98□□□□□ -1.29
COL8A1-206ENST00000474648 FRZBQ92765 325 aa6.98□□□□□ -1.29
COL8A1-206ENST00000474648 H3BNG1 76 aa6.97□□□□□ -1.29
COL8A1-206ENST00000474648 HLA-DQA1P01909 254 aa6.97□□□□□ -1.29
COL8A1-206ENST00000474648 APCSP02743 223 aa6.97□□□□□ -1.29
COL8A1-206ENST00000474648 RPS10P46783 165 aaKnown RBP6.97□□□□□ -1.29
COL8A1-206ENST00000474648 NRACQ8N912 160 aa6.97□□□□□ -1.29
COL8A1-206ENST00000474648 NEXN-AS1Q8NBZ9 246 aa6.97□□□□□ -1.29
COL8A1-206ENST00000474648 MUC7Q8TAX7 377 aa6.97□□□□□ -1.29
COL8A1-206ENST00000474648 MRAP2Q96G30 205 aa6.97□□□□□ -1.29
COL8A1-206ENST00000474648 TRBV10-1A0A0K0K1A3 114 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 GAGE12JA6NER3 117 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 NCR2O95944 276 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 MT-ND6P03923 174 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 LINC00694P0DN24 101 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 GYPEP15421 78 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 RAB5AP20339 215 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 CKS2P33552 79 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 GAGE1Q13065 139 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 GAGE4Q13068 117 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 GAGE5Q13069 117 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 RHOHQ15669 191 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 KIAA1644Q3SXP7 199 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 GAGE13Q4V321 117 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 ZFAND6Q6FIF0 208 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 RPL39LQ96EH5 51 aaKnown RBP6.96□□□□□ -1.3
COL8A1-206ENST00000474648 PRADC1Q9BSG0 188 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 NIT2Q9NQR4 276 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 TRAPPC1Q9Y5R8 145 aa6.96□□□□□ -1.3
COL8A1-206ENST00000474648 A0A096LPF7 62 aa6.95□□□□□ -1.3
COL8A1-206ENST00000474648 IGLL5B9A064 214 aa6.95□□□□□ -1.3
COL8A1-206ENST00000474648 D6R8Y8 96 aa6.95□□□□□ -1.3
COL8A1-206ENST00000474648 H7C1H1 209 aa6.95□□□□□ -1.3
COL8A1-206ENST00000474648 PHOX2AO14813 284 aa6.95□□□□□ -1.3
COL8A1-206ENST00000474648 FABP9Q0Z7S8 132 aa6.95□□□□□ -1.3
COL8A1-206ENST00000474648 ZNRF2Q8NHG8 242 aa6.95□□□□□ -1.3
COL8A1-206ENST00000474648 DNAJC30Q96LL9 226 aa6.95□□□□□ -1.3
COL8A1-206ENST00000474648 APLNQ9ULZ1 77 aa6.95□□□□□ -1.3
COL8A1-206ENST00000474648 TRBV7-3A0A075B6L6 115 aa6.94□□□□□ -1.3
COL8A1-206ENST00000474648 TRBV6-5A0A0K0K1A5 114 aa6.94□□□□□ -1.3
COL8A1-206ENST00000474648 NUPR2A6NF83 97 aa6.94□□□□□ -1.3
COL8A1-206ENST00000474648 NPYP01303 97 aa6.94□□□□□ -1.3
COL8A1-206ENST00000474648 PPBPP02775 128 aa6.94□□□□□ -1.3
COL8A1-206ENST00000474648 UBE2D3P61077 147 aa6.94□□□□□ -1.3
COL8A1-206ENST00000474648 UBE2D2P62837 147 aa6.94□□□□□ -1.3
COL8A1-206ENST00000474648 ORMDL3Q8N138 153 aa6.94□□□□□ -1.3
COL8A1-206ENST00000474648 ALKBH7Q9BT30 221 aaPredicted RBP6.94□□□□□ -1.3
COL8A1-206ENST00000474648 TNFRSF6BO95407 300 aa6.93□□□□□ -1.3
COL8A1-206ENST00000474648 TRGC2P03986 189 aa6.93□□□□□ -1.3
COL8A1-206ENST00000474648 POLR2KP53803 58 aaKnown RBP6.93□□□□□ -1.3
COL8A1-206ENST00000474648 RPL36AP83881 106 aaKnown RBP6.93□□□□□ -1.3
COL8A1-206ENST00000474648 MRPL23Q16540 153 aaKnown RBP6.93□□□□□ -1.3
COL8A1-206ENST00000474648 OR10J3Q5JRS4 329 aa6.93□□□□□ -1.3
COL8A1-206ENST00000474648 RPL36ALQ969Q0 106 aaKnown RBP6.93□□□□□ -1.3
COL8A1-206ENST00000474648 PRELID3AQ96N28 172 aa6.93□□□□□ -1.3
COL8A1-206ENST00000474648 KLK5Q9Y337 293 aaPredicted RBP6.93□□□□□ -1.3
COL8A1-206ENST00000474648 TNFRSF18Q9Y5U5 241 aa6.93□□□□□ -1.3
COL8A1-206ENST00000474648 ICOSQ9Y6W8 199 aa6.93□□□□□ -1.3
COL8A1-206ENST00000474648 TENM2Q9NT68 2774 aa6.93□□□□□ -1.3
COL8A1-206ENST00000474648 VPS13DQ5THJ4 4388 aa6.92□□□□□ -1.3
COL8A1-206ENST00000474648 PRSS47A8MTI9 375 aa6.92□□□□□ -1.3
COL8A1-206ENST00000474648 C3orf84H3BNL1 204 aa6.92□□□□□ -1.3
COL8A1-206ENST00000474648 NUDT3O95989 172 aa6.92□□□□□ -1.3
COL8A1-206ENST00000474648 PPP1R17O96001 155 aa6.92□□□□□ -1.3
COL8A1-206ENST00000474648 C15orf53Q8NAA6 179 aa6.92□□□□□ -1.3
COL8A1-206ENST00000474648 ATP6V0E2Q8NHE4 81 aa6.92□□□□□ -1.3
COL8A1-206ENST00000474648 C20orf78Q9BR46 151 aa6.92□□□□□ -1.3
COL8A1-206ENST00000474648 TMEM70Q9BUB7 260 aa6.92□□□□□ -1.3
COL8A1-206ENST00000474648 ST20Q9HBF5 79 aa6.92□□□□□ -1.3
COL8A1-206ENST00000474648 LAMTOR2Q9Y2Q5 125 aa6.92□□□□□ -1.3
COL8A1-206ENST00000474648 SDHAF1A6NFY7 115 aa6.91□□□□□ -1.3
COL8A1-206ENST00000474648 SRIP30626 198 aa6.91□□□□□ -1.3
COL8A1-206ENST00000474648 SUMO2P61956 95 aaKnown RBP6.91□□□□□ -1.3
COL8A1-206ENST00000474648 RPL32P62910 135 aaKnown RBP6.91□□□□□ -1.3
COL8A1-206ENST00000474648 ESRGQ1W209 222 aa6.91□□□□□ -1.3
COL8A1-206ENST00000474648 CASC10Q5T4H9 136 aa6.91□□□□□ -1.3
COL8A1-206ENST00000474648 LYPD5Q6UWN5 251 aa6.91□□□□□ -1.3
COL8A1-206ENST00000474648 NEGR1Q7Z3B1 354 aa6.91□□□□□ -1.3
COL8A1-206ENST00000474648 IGLV2-18A0A075B6J9 118 aa6.9□□□□□ -1.3
COL8A1-206ENST00000474648 IGHV3-38A0A0C4DH36 116 aa6.9□□□□□ -1.3
COL8A1-206ENST00000474648 TRBV27A0A0K0K1C4 114 aa6.9□□□□□ -1.3
COL8A1-206ENST00000474648 VCYO14598 125 aa6.9□□□□□ -1.3
COL8A1-206ENST00000474648 TCTAP57738 103 aa6.9□□□□□ -1.3
COL8A1-206ENST00000474648 NTM-AS1Q6ZSK4 140 aa6.9□□□□□ -1.3
COL8A1-206ENST00000474648 SH2D6Q7Z4S9 175 aa6.9□□□□□ -1.3
COL8A1-206ENST00000474648 DAZ4Q86SG3 579 aaKnown RBP6.9□□□□□ -1.3
COL8A1-206ENST00000474648 GTSF1LQ9H1H1 148 aa6.9□□□□□ -1.3
COL8A1-206ENST00000474648 DAZ3Q9NR90 486 aaKnown RBP6.9□□□□□ -1.3
COL8A1-206ENST00000474648 DNAH1Q9P2D7 4330 aa6.89□□□□□ -1.31
COL8A1-206ENST00000474648 LOC389332A0A1B0GUA5 103 aa6.89□□□□□ -1.31
COL8A1-206ENST00000474648 I3L3M4 83 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms