RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 GYPEP15421 78 aa13.41□□□□□ -0.26
PSPC1-203ENST00000471658 GAGE1Q13065 139 aa13.41□□□□□ -0.26
PSPC1-203ENST00000471658 GAGE4Q13068 117 aa13.41□□□□□ -0.26
PSPC1-203ENST00000471658 GAGE5Q13069 117 aa13.41□□□□□ -0.26
PSPC1-203ENST00000471658 RHOHQ15669 191 aa13.41□□□□□ -0.26
PSPC1-203ENST00000471658 GAGE13Q4V321 117 aa13.41□□□□□ -0.26
PSPC1-203ENST00000471658 ORMDL3Q8N138 153 aa13.41□□□□□ -0.26
PSPC1-203ENST00000471658 PRELID3AQ96N28 172 aa13.41□□□□□ -0.26
PSPC1-203ENST00000471658 PHOX2AO14813 284 aa13.4□□□□□ -0.26
PSPC1-203ENST00000471658 ZNRF2Q8NHG8 242 aa13.4□□□□□ -0.26
PSPC1-203ENST00000471658 PRADC1Q9BSG0 188 aa13.4□□□□□ -0.26
PSPC1-203ENST00000471658 NIT2Q9NQR4 276 aa13.4□□□□□ -0.26
PSPC1-203ENST00000471658 H7C1H1 209 aa13.39□□□□□ -0.27
PSPC1-203ENST00000471658 OR10J3Q5JRS4 329 aa13.39□□□□□ -0.27
PSPC1-203ENST00000471658 ALKBH7Q9BT30 221 aaPredicted RBP13.39□□□□□ -0.27
PSPC1-203ENST00000471658 TNFRSF6BO95407 300 aa13.39□□□□□ -0.27
PSPC1-203ENST00000471658 PPBPP02775 128 aa13.39□□□□□ -0.27
PSPC1-203ENST00000471658 DYNC2H1Q8NCM8 4307 aaKnown RBP13.38□□□□□ -0.27
PSPC1-203ENST00000471658 TRBV10-1A0A0K0K1A3 114 aa13.38□□□□□ -0.27
PSPC1-203ENST00000471658 SRIP30626 198 aa13.38□□□□□ -0.27
PSPC1-203ENST00000471658 DEFB104AQ8WTQ1 72 aa13.38□□□□□ -0.27
PSPC1-203ENST00000471658 A0A096LPF7 62 aa13.37□□□□□ -0.27
PSPC1-203ENST00000471658 IGLL5B9A064 214 aa13.37□□□□□ -0.27
PSPC1-203ENST00000471658 TNFRSF18Q9Y5U5 241 aa13.37□□□□□ -0.27
PSPC1-203ENST00000471658 ZFAND6Q6FIF0 208 aa13.36□□□□□ -0.27
PSPC1-203ENST00000471658 CEMP1Q6PRD7 247 aaPredicted RBP13.36□□□□□ -0.27
PSPC1-203ENST00000471658 NEGR1Q7Z3B1 354 aa13.36□□□□□ -0.27
PSPC1-203ENST00000471658 TRBV7-3A0A075B6L6 115 aa13.35□□□□□ -0.27
PSPC1-203ENST00000471658 IGHV3-38A0A0C4DH36 116 aa13.35□□□□□ -0.27
PSPC1-203ENST00000471658 RPL36AP83881 106 aaKnown RBP13.35□□□□□ -0.27
PSPC1-203ENST00000471658 RPL36ALQ969Q0 106 aaKnown RBP13.35□□□□□ -0.27
PSPC1-203ENST00000471658 WWC2-AS2Q96NR7 200 aa13.35□□□□□ -0.27
PSPC1-203ENST00000471658 ST20Q9HBF5 79 aa13.35□□□□□ -0.27
PSPC1-203ENST00000471658 TRBV6-5A0A0K0K1A5 114 aa13.35□□□□□ -0.27
PSPC1-203ENST00000471658 LOC389332A0A1B0GUA5 103 aa13.35□□□□□ -0.27
PSPC1-203ENST00000471658 NUDT3O95989 172 aa13.35□□□□□ -0.27
PSPC1-203ENST00000471658 IQCJQ1A5X6 159 aa13.35□□□□□ -0.27
PSPC1-203ENST00000471658 DNAJC30Q96LL9 226 aa13.35□□□□□ -0.27
PSPC1-203ENST00000471658 STARD9Q9P2P6 4700 aa13.34□□□□□ -0.27
PSPC1-203ENST00000471658 LINC00694P0DN24 101 aa13.34□□□□□ -0.27
PSPC1-203ENST00000471658 UBE2D3P61077 147 aa13.34□□□□□ -0.27
PSPC1-203ENST00000471658 UBE2D2P62837 147 aa13.34□□□□□ -0.27
PSPC1-203ENST00000471658 PLECQ15149 4684 aaKnown RBP13.33□□□□□ -0.28
PSPC1-203ENST00000471658 SDHAF1A6NFY7 115 aa13.33□□□□□ -0.28
PSPC1-203ENST00000471658 H3BNG1 76 aa13.33□□□□□ -0.28
PSPC1-203ENST00000471658 POLR2KP53803 58 aaKnown RBP13.33□□□□□ -0.28
PSPC1-203ENST00000471658 SUMO2P61956 95 aaKnown RBP13.33□□□□□ -0.28
PSPC1-203ENST00000471658 MUC7Q8TAX7 377 aa13.33□□□□□ -0.28
PSPC1-203ENST00000471658 ICOSQ9Y6W8 199 aa13.33□□□□□ -0.28
PSPC1-203ENST00000471658 CSMD3Q7Z407 3707 aa13.33□□□□□ -0.28
PSPC1-203ENST00000471658 PPP1R17O96001 155 aa13.32□□□□□ -0.28
PSPC1-203ENST00000471658 TMEM70Q9BUB7 260 aa13.32□□□□□ -0.28
PSPC1-203ENST00000471658 MRPL23Q16540 153 aaKnown RBP13.31□□□□□ -0.28
PSPC1-203ENST00000471658 C20orf78Q9BR46 151 aa13.31□□□□□ -0.28
PSPC1-203ENST00000471658 LAMTOR2Q9Y2Q5 125 aa13.31□□□□□ -0.28
PSPC1-203ENST00000471658 ATP6V0E2Q8NHE4 81 aa13.31□□□□□ -0.28
PSPC1-203ENST00000471658 C18orf32Q8TCD1 76 aa13.31□□□□□ -0.28
PSPC1-203ENST00000471658 MAP1LC3AQ9H492 121 aa13.31□□□□□ -0.28
PSPC1-203ENST00000471658 NUPR2A6NF83 97 aa13.3□□□□□ -0.28
PSPC1-203ENST00000471658 PRSS47A8MTI9 375 aa13.29□□□□□ -0.28
PSPC1-203ENST00000471658 PMCHP20382 165 aa13.29□□□□□ -0.28
PSPC1-203ENST00000471658 IFI27P40305 119 aaPredicted RBP13.29□□□□□ -0.28
PSPC1-203ENST00000471658 SMIM2Q9BVW6 85 aa13.29□□□□□ -0.28
PSPC1-203ENST00000471658 IGLV2-18A0A075B6J9 118 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 C1orf196B1AJZ1 125 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 HIST1H2BKO60814 126 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 HIST1H2BJP06899 126 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 HIST1H2BOP23527 126 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 HIST1H2BBP33778 126 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 HIST1H2BDP58876 126 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 HIST1H2BCP62807 126 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 HIST2H2BEQ16778 126 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.28□□□□□ -0.28
PSPC1-203ENST00000471658 HIST1H2BHQ93079 126 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 HIST1H2BNQ99877 126 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 HIST1H2BMQ99879 126 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 APLNQ9ULZ1 77 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 TRBV27A0A0K0K1C4 114 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 VCYO14598 125 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 C15orf53Q8NAA6 179 aa13.28□□□□□ -0.28
PSPC1-203ENST00000471658 KLK5Q9Y337 293 aaPredicted RBP13.28□□□□□ -0.28
PSPC1-203ENST00000471658 TCAPO15273 167 aa13.27□□□□□ -0.29
PSPC1-203ENST00000471658 NTM-AS1Q6ZSK4 140 aa13.27□□□□□ -0.29
PSPC1-203ENST00000471658 DAZ4Q86SG3 579 aaKnown RBP13.27□□□□□ -0.29
PSPC1-203ENST00000471658 URB1-AS1Q96HZ7 61 aa13.27□□□□□ -0.29
PSPC1-203ENST00000471658 DAZ3Q9NR90 486 aaKnown RBP13.27□□□□□ -0.29
PSPC1-203ENST00000471658 I3L3M4 83 aa13.26□□□□□ -0.29
PSPC1-203ENST00000471658 TSHBP01222 138 aa13.26□□□□□ -0.29
PSPC1-203ENST00000471658 RPL32P62910 135 aaKnown RBP13.26□□□□□ -0.29
PSPC1-203ENST00000471658 LYPD5Q6UWN5 251 aa13.26□□□□□ -0.29
PSPC1-203ENST00000471658 Q8N8P6 123 aa13.26□□□□□ -0.29
PSPC1-203ENST00000471658 PRSS3P2Q8NHM4 247 aa13.26□□□□□ -0.29
PSPC1-203ENST00000471658 ESRGQ1W209 222 aa13.25□□□□□ -0.29
PSPC1-203ENST00000471658 GTSF1LQ9H1H1 148 aa13.25□□□□□ -0.29
PSPC1-203ENST00000471658 NIT1Q86X76 327 aa13.24□□□□□ -0.29
PSPC1-203ENST00000471658 Q0VG73 95 aa13.24□□□□□ -0.29
PSPC1-203ENST00000471658 COTL1Q14019 142 aa13.23□□□□□ -0.29
PSPC1-203ENST00000471658 SH2D6Q7Z4S9 175 aa13.23□□□□□ -0.29
PSPC1-203ENST00000471658 BAGE3Q86Y29 109 aa13.23□□□□□ -0.29
PSPC1-203ENST00000471658 NXT2Q9NPJ8 142 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms