RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 MRPL18Q9H0U6 180 aaKnown RBP20.11■□□□□ 0.81
SOD1-203ENST00000470944 CKS2P33552 79 aa20.1■□□□□ 0.81
SOD1-203ENST00000470944 FRZBQ92765 325 aa20.1■□□□□ 0.81
SOD1-203ENST00000470944 GAGE12JA6NER3 117 aa20.1■□□□□ 0.81
SOD1-203ENST00000470944 H7C1H1 209 aa20.1■□□□□ 0.81
SOD1-203ENST00000470944 MT-ND6P03923 174 aa20.1■□□□□ 0.81
SOD1-203ENST00000470944 GAGE1Q13065 139 aa20.1■□□□□ 0.81
SOD1-203ENST00000470944 GAGE4Q13068 117 aa20.1■□□□□ 0.81
SOD1-203ENST00000470944 GAGE5Q13069 117 aa20.1■□□□□ 0.81
SOD1-203ENST00000470944 GAGE13Q4V321 117 aa20.1■□□□□ 0.81
SOD1-203ENST00000470944 TRAPPC1Q9Y5R8 145 aa20.1■□□□□ 0.81
SOD1-203ENST00000470944 TRBV10-1A0A0K0K1A3 114 aa20.09■□□□□ 0.81
SOD1-203ENST00000470944 H3BNG1 76 aa20.09■□□□□ 0.81
SOD1-203ENST00000470944 PLECQ15149 4684 aaKnown RBP20.09■□□□□ 0.81
SOD1-203ENST00000470944 RAB5AP20339 215 aa20.08■□□□□ 0.81
SOD1-203ENST00000470944 NRACQ8N912 160 aa20.08■□□□□ 0.81
SOD1-203ENST00000470944 ZNRF2Q8NHG8 242 aa20.08■□□□□ 0.81
SOD1-203ENST00000470944 A0A096LPF7 62 aa20.07■□□□□ 0.8
SOD1-203ENST00000470944 FABP9Q0Z7S8 132 aa20.07■□□□□ 0.8
SOD1-203ENST00000470944 NIT2Q9NQR4 276 aa20.07■□□□□ 0.8
SOD1-203ENST00000470944 NUDT3O95989 172 aa20.07■□□□□ 0.8
SOD1-203ENST00000470944 ORMDL3Q8N138 153 aa20.06■□□□□ 0.8
SOD1-203ENST00000470944 LINC00694P0DN24 101 aa20.05■□□□□ 0.8
SOD1-203ENST00000470944 KLK5Q9Y337 293 aaPredicted RBP20.05■□□□□ 0.8
SOD1-203ENST00000470944 ICOSQ9Y6W8 199 aa20.05■□□□□ 0.8
SOD1-203ENST00000470944 TRBV7-3A0A075B6L6 115 aa20.05■□□□□ 0.8
SOD1-203ENST00000470944 OR10J3Q5JRS4 329 aa20.05■□□□□ 0.8
SOD1-203ENST00000470944 NPYP01303 97 aa20.04■□□□□ 0.8
SOD1-203ENST00000470944 PPBPP02775 128 aa20.04■□□□□ 0.8
SOD1-203ENST00000470944 RPL36AP83881 106 aaKnown RBP20.04■□□□□ 0.8
SOD1-203ENST00000470944 RPL36ALQ969Q0 106 aaKnown RBP20.04■□□□□ 0.8
SOD1-203ENST00000470944 MRPL23Q16540 153 aaKnown RBP20.03■□□□□ 0.8
SOD1-203ENST00000470944 PRELID3AQ96N28 172 aa20.03■□□□□ 0.8
SOD1-203ENST00000470944 TNFRSF18Q9Y5U5 241 aa20.03■□□□□ 0.8
SOD1-203ENST00000470944 TNFRSF6BO95407 300 aa20.02■□□□□ 0.8
SOD1-203ENST00000470944 DNAJC30Q96LL9 226 aa20.02■□□□□ 0.8
SOD1-203ENST00000470944 APLNQ9ULZ1 77 aa20.02■□□□□ 0.8
SOD1-203ENST00000470944 TMA7Q9Y2S6 64 aaKnown RBP20.02■□□□□ 0.8
SOD1-203ENST00000470944 TENM2Q9NT68 2774 aa20.02■□□□□ 0.79
SOD1-203ENST00000470944 SRIP30626 198 aa20.02■□□□□ 0.79
SOD1-203ENST00000470944 UBE2D3P61077 147 aa20.02■□□□□ 0.79
SOD1-203ENST00000470944 UBE2D2P62837 147 aa20.02■□□□□ 0.79
SOD1-203ENST00000470944 SREK1IP1Q8N9Q2 155 aaPredicted RBP20.02■□□□□ 0.79
SOD1-203ENST00000470944 C15orf53Q8NAA6 179 aa20.02■□□□□ 0.79
SOD1-203ENST00000470944 TRGC2P03986 189 aa20.01■□□□□ 0.79
SOD1-203ENST00000470944 TRBV6-5A0A0K0K1A5 114 aa20■□□□□ 0.79
SOD1-203ENST00000470944 CASC10Q5T4H9 136 aa20■□□□□ 0.79
SOD1-203ENST00000470944 IGHV3-38A0A0C4DH36 116 aa19.99■□□□□ 0.79
SOD1-203ENST00000470944 DEFB104AQ8WTQ1 72 aa19.99■□□□□ 0.79
SOD1-203ENST00000470944 ALKBH7Q9BT30 221 aaPredicted RBP19.99■□□□□ 0.79
SOD1-203ENST00000470944 SDHAF1A6NFY7 115 aa19.98■□□□□ 0.79
SOD1-203ENST00000470944 NEGR1Q7Z3B1 354 aa19.98■□□□□ 0.79
SOD1-203ENST00000470944 ST20Q9HBF5 79 aa19.98■□□□□ 0.79
SOD1-203ENST00000470944 SUMO2P61956 95 aaKnown RBP19.97■□□□□ 0.79
SOD1-203ENST00000470944 ATP6V0E2Q8NHE4 81 aa19.97■□□□□ 0.79
SOD1-203ENST00000470944 TMEM70Q9BUB7 260 aa19.97■□□□□ 0.79
SOD1-203ENST00000470944 C3orf84H3BNL1 204 aa19.96■□□□□ 0.79
SOD1-203ENST00000470944 PHOX2AO14813 284 aa19.96■□□□□ 0.79
SOD1-203ENST00000470944 PPP1R17O96001 155 aa19.96■□□□□ 0.79
SOD1-203ENST00000470944 POLR2KP53803 58 aaKnown RBP19.95■□□□□ 0.78
SOD1-203ENST00000470944 LYSTQ99698 3801 aa19.94■□□□□ 0.78
SOD1-203ENST00000470944 C20orf78Q9BR46 151 aa19.94■□□□□ 0.78
SOD1-203ENST00000470944 LAMTOR2Q9Y2Q5 125 aa19.94■□□□□ 0.78
SOD1-203ENST00000470944 ESRGQ1W209 222 aa19.93■□□□□ 0.78
SOD1-203ENST00000470944 DAZ4Q86SG3 579 aaKnown RBP19.93■□□□□ 0.78
SOD1-203ENST00000470944 DAZ3Q9NR90 486 aaKnown RBP19.93■□□□□ 0.78
SOD1-203ENST00000470944 LOC389332A0A1B0GUA5 103 aa19.92■□□□□ 0.78
SOD1-203ENST00000470944 LYPD5Q6UWN5 251 aa19.92■□□□□ 0.78
SOD1-203ENST00000470944 SH2D6Q7Z4S9 175 aa19.92■□□□□ 0.78
SOD1-203ENST00000470944 TCTAP57738 103 aa19.91■□□□□ 0.78
SOD1-203ENST00000470944 GTSF1LQ9H1H1 148 aa19.9■□□□□ 0.78
SOD1-203ENST00000470944 TRBV27A0A0K0K1C4 114 aa19.9■□□□□ 0.78
SOD1-203ENST00000470944 SMIM2Q9BVW6 85 aa19.9■□□□□ 0.78
SOD1-203ENST00000470944 NTM-AS1Q6ZSK4 140 aa19.89■□□□□ 0.77
SOD1-203ENST00000470944 MAP1LC3AQ9H492 121 aa19.89■□□□□ 0.77
SOD1-203ENST00000470944 IQCJQ1A5X6 159 aa19.88■□□□□ 0.77
SOD1-203ENST00000470944 PRSS47A8MTI9 375 aa19.88■□□□□ 0.77
SOD1-203ENST00000470944 I3L3M4 83 aa19.88■□□□□ 0.77
SOD1-203ENST00000470944 VCYO14598 125 aa19.88■□□□□ 0.77
SOD1-203ENST00000470944 PMCHP20382 165 aa19.88■□□□□ 0.77
SOD1-203ENST00000470944 IGLV2-18A0A075B6J9 118 aa19.87■□□□□ 0.77
SOD1-203ENST00000470944 RPL32P62910 135 aaKnown RBP19.87■□□□□ 0.77
SOD1-203ENST00000470944 C18orf32Q8TCD1 76 aa19.87■□□□□ 0.77
SOD1-203ENST00000470944 TSHBP01222 138 aa19.85■□□□□ 0.77
SOD1-203ENST00000470944 IFI27P40305 119 aaPredicted RBP19.85■□□□□ 0.77
SOD1-203ENST00000470944 LINC00588Q9Y4M8 146 aa19.85■□□□□ 0.77
SOD1-203ENST00000470944 COTL1Q14019 142 aa19.84■□□□□ 0.77
SOD1-203ENST00000470944 TRBV6-8A0A0A6YYG3 113 aa19.83■□□□□ 0.77
SOD1-203ENST00000470944 TCAPO15273 167 aa19.82■□□□□ 0.76
SOD1-203ENST00000470944 TIRAPP58753 221 aa19.82■□□□□ 0.76
SOD1-203ENST00000470944 CCL18P55774 89 aa19.82■□□□□ 0.76
SOD1-203ENST00000470944 Q8N8P6 123 aa19.82■□□□□ 0.76
SOD1-203ENST00000470944 KIR2DL4Q99706 377 aa19.81■□□□□ 0.76
SOD1-203ENST00000470944 LELP1Q5T871 98 aa19.8■□□□□ 0.76
SOD1-203ENST00000470944 LOC105371267A0A1B0GV96 52 aa19.79■□□□□ 0.76
SOD1-203ENST00000470944 PRSS3P2Q8NHM4 247 aa19.79■□□□□ 0.76
SOD1-203ENST00000470944 URB1-AS1Q96HZ7 61 aa19.79■□□□□ 0.76
SOD1-203ENST00000470944 NXT2Q9NPJ8 142 aaKnown RBP19.79■□□□□ 0.76
SOD1-203ENST00000470944 DNAH1Q9P2D7 4330 aa19.78■□□□□ 0.76
SOD1-203ENST00000470944 HIST1H2BKO60814 126 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms