RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 F8VRH5 84 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 FAM72CH0Y354 149 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 FAM72AQ5TYM5 149 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 FAM72DQ6L9T8 149 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 Q6ZTC4 211 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 SCXQ7RTU7 201 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 FAM72BQ86X60 149 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 KRTAP4-5Q9BYR2 181 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 NDUFA12Q9UI09 145 aa3.66□□□□□ -1.82
COL3A1-205ENST00000470167 PHF3Q92576 2039 aaKnown RBP3.65□□□□□ -1.82
COL3A1-205ENST00000470167 A0A087WVE0 104 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 TRBV7-4A0A0J9YYF1 115 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 A0A1B0GW54 56 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 ZNF815PA8K554 130 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 CDK2AP2O75956 126 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 IGHV4-39P01824 125 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 PROK1P58294 105 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 TFF2Q03403 129 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 TFF3Q07654 80 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 RMI2Q96E14 147 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 PRO3102Q9H379 93 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 ICOSQ9Y6W8 199 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 R4GMQ9 66 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 NUP214P35658 2090 aaPredicted RBP3.65□□□□□ -1.83
COL3A1-205ENST00000470167 MYO9AB2RTY4 2548 aa3.65□□□□□ -1.83
COL3A1-205ENST00000470167 TRAV40A0A0B4J280 105 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 A0A1B0GUT8 65 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 IGLV2-14P01704 120 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 IGHV3-13P01766 116 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 PRSS1P07477 247 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 RPL28P46779 137 aaKnown RBP3.64□□□□□ -1.83
COL3A1-205ENST00000470167 Q5VV11 94 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 ORMDL3Q8N138 153 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 ZNF843Q8N446 348 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 C9orf106Q8NAJ2 232 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 LINC01560Q8TB33 94 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 OBSCN-AS1Q96MR7 158 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 C2CD3Q4AC94 2353 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 DOCK11Q5JSL3 2073 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 NOTCH2Q04721 2471 aa3.64□□□□□ -1.83
COL3A1-205ENST00000470167 SCN3AQ9NY46 2000 aa3.63□□□□□ -1.83
COL3A1-205ENST00000470167 A0A1B0GVT2 93 aa3.63□□□□□ -1.83
COL3A1-205ENST00000470167 SDHAF1A6NFY7 115 aa3.63□□□□□ -1.83
COL3A1-205ENST00000470167 C11orf86A6NJI1 115 aa3.63□□□□□ -1.83
COL3A1-205ENST00000470167 C5orf67F2Z3F1 127 aa3.63□□□□□ -1.83
COL3A1-205ENST00000470167 IAPPP10997 89 aa3.63□□□□□ -1.83
COL3A1-205ENST00000470167 SPINT3P49223 89 aa3.63□□□□□ -1.83
COL3A1-205ENST00000470167 SPANXN5Q5MJ07 72 aa3.63□□□□□ -1.83
COL3A1-205ENST00000470167 IMMP1LQ96LU5 166 aa3.63□□□□□ -1.83
COL3A1-205ENST00000470167 CDC42SE1Q9NRR8 79 aa3.63□□□□□ -1.83
COL3A1-205ENST00000470167 TIMM8BQ9Y5J9 83 aaPredicted RBP3.63□□□□□ -1.83
COL3A1-205ENST00000470167 EML6Q6ZMW3 1958 aa3.63□□□□□ -1.83
COL3A1-205ENST00000470167 IGHV1-45A0A0A0MS14 117 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 IGKV3D-7A0A0C4DH55 119 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 IGKV1-12A0A0C4DH73 117 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 A0A0J9YX75 114 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 TRBV6-1A0A0K0K1D8 114 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 HCG22E2RYF7 251 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 M0R135 149 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 CCL22O00626 93 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 IGKV1D-12P01611 117 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 FXYD4P59646 89 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 C15orf32Q32M92 178 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 UBALD1Q8TB05 177 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 KLF14Q8TD94 323 aaPredicted RBP3.62□□□□□ -1.83
COL3A1-205ENST00000470167 COL4A4P53420 1690 aaPredicted RBP3.62□□□□□ -1.83
COL3A1-205ENST00000470167 THADAQ6YHU6 1953 aa3.62□□□□□ -1.83
COL3A1-205ENST00000470167 TCF20Q9UGU0 1960 aaKnown RBP3.62□□□□□ -1.83
COL3A1-205ENST00000470167 AGRNO00468 2067 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 ATG2BQ96BY7 2078 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 TEX15Q9BXT5 2789 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 PIEZO2Q9H5I5 2752 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 IGHV3OR16-13A0A075B7E8 117 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 TRBV5-4A0A0C4DH59 114 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 IGIPA6NJ69 53 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 K7EQG2 157 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 DNAL4O96015 105 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 CD24P25063 80 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 ZNF137PP52743 207 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 Q1RN00 199 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 ADAMTSL4-AS1Q5T5F5 129 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 FAM53AQ6NSI3 398 aaPredicted RBP3.61□□□□□ -1.83
COL3A1-205ENST00000470167 MIR17HGQ75NE6 70 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 C17orf82Q86X59 251 aaPredicted RBP3.61□□□□□ -1.83
COL3A1-205ENST00000470167 Q8IYB0 196 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 LIMD2Q9BT23 127 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 LINC00574Q9H8X3 128 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 TMEM14BQ9NUH8 114 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 C22orf24Q9Y442 160 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 SPEGQ15772 3267 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 PCNX3Q9H6A9 2034 aa3.61□□□□□ -1.83
COL3A1-205ENST00000470167 PLXNA2O75051 1894 aa3.6□□□□□ -1.83
COL3A1-205ENST00000470167 EML5Q05BV3 1969 aa3.6□□□□□ -1.83
COL3A1-205ENST00000470167 TDRD6O60522 2096 aaKnown RBP3.6□□□□□ -1.83
COL3A1-205ENST00000470167 TRAV23DV6A0A075B6W5 121 aa3.6□□□□□ -1.83
COL3A1-205ENST00000470167 IGHV5-10-1A0A0J9YXX1 117 aa3.6□□□□□ -1.83
COL3A1-205ENST00000470167 PINLYPA6NC86 204 aa3.6□□□□□ -1.83
COL3A1-205ENST00000470167 C10orf142B7Z368 130 aa3.6□□□□□ -1.83
COL3A1-205ENST00000470167 D6R8Y8 96 aa3.6□□□□□ -1.83
COL3A1-205ENST00000470167 NTN3O00634 580 aaPredicted RBP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms