RNA–Protein interactions for RNA: ENST00000468384.1

HMGB1-207, Transcript of high mobility group box 1, humanhuman

TSL 1 (best)

Gene HMGB1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-207ENST00000468384 BORCS7Q96B45 105 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 WFDC1Q9HC57 220 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 UQCC1Q9NVA1 299 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 GSKIPQ9P0R6 139 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 OR52A1Q9UKL2 312 aa2.54□□□□□ -2
HMGB1-207ENST00000468384 MCRIP1C9JLW8 97 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 K7EPK0 472 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 MRASO14807 208 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 GNG7O60262 68 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 MT-CO2P00403 227 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 SULT1A3P0DMM9 295 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 SULT1A4P0DMN0 295 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 SCGB1C2P0DMR2 95 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 ORM2P19652 201 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 RBM11P57052 281 aaKnown RBP2.53□□□□□ -2
HMGB1-207ENST00000468384 HSPE1P61604 102 aaKnown RBP2.53□□□□□ -2
HMGB1-207ENST00000468384 SURF2Q15527 256 aaPredicted RBP2.53□□□□□ -2
HMGB1-207ENST00000468384 MPV17L2Q567V2 206 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 SAMD13Q5VXD3 122 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.53□□□□□ -2
HMGB1-207ENST00000468384 OR10AC1Q8NH08 325 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 LHFPL5Q8TAF8 219 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 SCGB1C1Q8TD33 95 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 ADAT3Q96EY9 351 aaPredicted RBP2.53□□□□□ -2
HMGB1-207ENST00000468384 PHYHIPLQ96FC7 376 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 YPEL4Q96NS1 127 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 SHANK2-AS3Q9BTD1 123 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 THTPAQ9BU02 230 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 KLK12Q9UKR0 248 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 PXMP4Q9Y6I8 212 aa2.53□□□□□ -2
HMGB1-207ENST00000468384 A0A096LNI7 61 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 IGKV3D-20A0A0C4DH25 116 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 A0A1B0GVX0 72 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 TMEM250H0YL14 139 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 IL15RAQ13261 267 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 HMGN3Q15651 99 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 TMEM241Q24JQ0 296 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 IAH1Q2TAA2 248 aaPredicted RBP2.52□□□□□ -2.01
HMGB1-207ENST00000468384 FA2HQ7L5A8 372 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 C15orf56Q8N910 161 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 SND1-IT1Q9HBX3 110 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 ABRACLQ9P1F3 81 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 HSPB11Q9Y547 144 aa2.52□□□□□ -2.01
HMGB1-207ENST00000468384 IGSF23A1L1A6 192 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 HMGB3O15347 200 aaKnown RBP2.51□□□□□ -2.01
HMGB1-207ENST00000468384 IGKV1-39P01597 117 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 IGKV1D-39P04432 117 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 OR5AC1P0C628 307 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 SEC11BP0C7V7 166 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 S100A2P29034 98 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 S100A7P31151 101 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 DEFA3P59666 94 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 GABARAPL2P60520 117 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 RPS20P60866 119 aaKnown RBP2.51□□□□□ -2.01
HMGB1-207ENST00000468384 HERVK_113P63121 156 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 BTN1A1Q13410 526 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 MPV17LQ2QL34 196 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 CCDC58Q4VC31 144 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 TMEM78Q5T7P6 136 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 GOLT1AQ6ZVE7 132 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 PCP2Q8IVA1 136 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 DAND5Q8N907 189 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 MRPL30Q8TCC3 161 aaKnown RBP2.51□□□□□ -2.01
HMGB1-207ENST00000468384 C15orf40Q8WUR7 153 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 GPR146Q96CH1 333 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 CAMK2N2Q96S95 79 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 CGREF1Q99674 301 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 EIF5A2Q9GZV4 153 aaKnown RBP2.51□□□□□ -2.01
HMGB1-207ENST00000468384 TMEM138Q9NPI0 162 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 RPRMQ9NS64 109 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 RSL24D1Q9UHA3 163 aaKnown RBP2.51□□□□□ -2.01
HMGB1-207ENST00000468384 PRNDQ9UKY0 176 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 ANAPC10Q9UM13 185 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 R4GMQ9 66 aa2.51□□□□□ -2.01
HMGB1-207ENST00000468384 TRBV6-6A0A0A6YYG2 114 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 IGKV1-6A0A0C4DH72 117 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 A0A1B0GV50 99 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 MAP1LC3B2A6NCE7 125 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 EFCAB10A6NFE3 127 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 B4DEV8 164 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 G3V2T6 193 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 I3L2K1 104 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 M0R381 172 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 SPINK4O60575 86 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 OR10J4P0C629 311 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 WNT4P56705 351 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 LINC00313P59037 77 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 SNRPGP62308 76 aaKnown RBP2.5□□□□□ -2.01
HMGB1-207ENST00000468384 GNG5P63218 68 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 EIF5AP63241 154 aaKnown RBP2.5□□□□□ -2.01
HMGB1-207ENST00000468384 TMEM128Q5BJH2 165 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 ANKRD29Q8N6D5 301 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 OR51H1Q8NH63 302 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 CYYR1Q96J86 154 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 DERL3Q96Q80 235 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 TSC22D3Q99576 134 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 TMEM147Q9BVK8 224 aa2.5□□□□□ -2.01
HMGB1-207ENST00000468384 MAP1LC3BQ9GZQ8 125 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms