RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 ANK2Q01484 3957 aa3.31□□□□□ -1.88
CSMD3-205ENST00000462254 TMEM238C9JI98 176 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 H3BMM0 161 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 M0R2Z0 102 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 TCAPO15273 167 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 TYMSP04818 313 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 MGST1P10620 155 aaKnown RBP3.3□□□□□ -1.88
CSMD3-205ENST00000462254 G0S2P27469 103 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 CRIP1P50238 77 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 FXYD7P58549 80 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 ADIRFQ15847 76 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 C4orf26Q17RF5 130 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 SPINK13Q1W4C9 94 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 TMEM241Q24JQ0 296 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 EBLN2Q6P2I7 272 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 Q6ZQT7 251 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 TMEM183AQ8IXX5 376 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 DEFB125Q8N687 156 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 OR4B1Q8NGF8 309 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 SMIM12Q96EX1 92 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 LINC00477Q96M19 166 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 ZFP30Q9Y2G7 519 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 LENEPQ9Y5L5 61 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 LY96Q9Y6Y9 160 aa3.3□□□□□ -1.88
CSMD3-205ENST00000462254 IGLV8-61A0A075B6I0 122 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 TRAV12-2A0A075B6T6 113 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 A0A087WYN8 130 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 C19orf71A6NCJ1 209 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 KLLNB2CW77 178 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 H0Y9J4 135 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 CRISP2P16562 243 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 TSPOP30536 169 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 CMC4P56277 68 aaPredicted RBP3.29□□□□□ -1.88
CSMD3-205ENST00000462254 RPL19P84098 196 aaKnown RBP3.29□□□□□ -1.88
CSMD3-205ENST00000462254 BTN1A1Q13410 526 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 RBMY1FQ15415 496 aaKnown RBP3.29□□□□□ -1.88
CSMD3-205ENST00000462254 RNF212Q495C1 297 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 GTSCR1Q86UQ5 136 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 ODF3Q96PU9 254 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 NDFIP1Q9BT67 221 aa3.29□□□□□ -1.88
CSMD3-205ENST00000462254 RNASE7Q9H1E1 156 aaKnown RBP3.29□□□□□ -1.88
CSMD3-205ENST00000462254 DNAH3Q8TD57 4116 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 C7orf77A4D0Y5 90 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 C7orf71A4D174 169 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 SH2D1AO60880 128 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 SCO1O75880 301 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 GPX1P07203 203 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 GIG44P09565 113 aaPredicted RBP3.28□□□□□ -1.88
CSMD3-205ENST00000462254 CACNG7P62955 275 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 CXCL6P80162 114 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 TTC32Q5I0X7 151 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 COA6Q5JTJ3 125 aaKnown RBP3.28□□□□□ -1.88
CSMD3-205ENST00000462254 IBA57Q5T440 356 aaKnown RBP3.28□□□□□ -1.88
CSMD3-205ENST00000462254 GFI1BQ5VTD9 330 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 Q6AWC8 147 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 LINC00173Q6ZV60 143 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 FAM231DQ6ZW35 169 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 SVBPQ8N300 66 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 SFRP2Q96HF1 295 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 MAP1LC3AQ9H492 121 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 RPS10P5Q9NQ39 176 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 OSTCQ9NRP0 149 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 V9GYV3 84 aa3.28□□□□□ -1.88
CSMD3-205ENST00000462254 A0A087WWC5 75 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 TRAV12-3A0A0B4J271 114 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 IGKV3D-20A0A0C4DH25 116 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 A0A0J9YXV3 536 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 FABP5P3A8MUU1 101 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 EPM2AB3EWF7 344 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 B4DEV8 164 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 ZNF324O75467 553 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-205ENST00000462254 PRB2P02812 416 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-205ENST00000462254 PFN1P07737 140 aaKnown RBP3.27□□□□□ -1.89
CSMD3-205ENST00000462254 GZMBP10144 247 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 RNASE4P34096 147 aaKnown RBP3.27□□□□□ -1.89
CSMD3-205ENST00000462254 RHEBQ15382 184 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 CASC10Q5T4H9 136 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 FAM162BQ5T6X4 162 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 KPRPQ5T749 579 aaPredicted RBP3.27□□□□□ -1.89
CSMD3-205ENST00000462254 C1orf158Q8N1D5 194 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 GATD1Q8NB37 220 aa3.27□□□□□ -1.89
CSMD3-205ENST00000462254 TMSB15BA0A087X1C1 80 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 LOC102724200A0A096LPH7 203 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-205ENST00000462254 TRAV21A0A0B4J279 112 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 GRIFINA4D1Z8 144 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 TMEM189A5PLL7 270 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 ZNF705GA8MUZ8 300 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-205ENST00000462254 H7BYZ3 331 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 K7EIL1 84 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 INSP01308 110 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 AMBPP02760 352 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 MT-ND4LP03901 98 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 PRM2P04554 102 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 CHTF8P0CG12 524 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 MORN3Q6PF18 240 aaPredicted RBP3.26□□□□□ -1.89
CSMD3-205ENST00000462254 ZNF493Q6ZR52 646 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 OR2D3Q8NGH3 330 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 LITAFQ99732 161 aa3.26□□□□□ -1.89
CSMD3-205ENST00000462254 RPP21Q9H633 154 aaKnown RBP3.26□□□□□ -1.89
CSMD3-205ENST00000462254 BIN3Q9NQY0 253 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms