RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 SPINK8P0C7L1 97 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 PROK1P58294 105 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 OR9G4Q8NGQ1 327 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 LINC01619G3V211 115 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 ELANEP08246 267 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 SCGB1A1P11684 91 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 RPL35AP18077 110 aaKnown RBP8.94□□□□□ -0.98
SMPD4-213ENST00000454468 SEC11AP67812 179 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 CFHR3Q02985 330 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 SH2D6Q7Z4S9 175 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 ZNF575Q86XF7 245 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 PRSS2P07478 247 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 MRPL16Q9NX20 251 aaKnown RBP8.94□□□□□ -0.98
SMPD4-213ENST00000454468 APCP25054 2843 aa8.94□□□□□ -0.98
SMPD4-213ENST00000454468 J3QLI3 93 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 VCYO14598 125 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 SAMD5Q5TGI4 173 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 MAPKAPK5-AS1Q8N8E1 139 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 PEMTQ9UBM1 199 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 MUC4Q99102 2169 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 A0A087WX48 190 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 F8VRH5 84 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 SOCS3O14543 225 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 ZNF479Q96JC4 524 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 CNFNQ9BYD5 112 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 ZNF702PQ9H963 129 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 A0A1B0GWB2 263 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 Q6YL49 198 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 STHQ8IWL8 128 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 RNF183Q96D59 192 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 PRADC1Q9BSG0 188 aa8.93□□□□□ -0.98
SMPD4-213ENST00000454468 A0A0U1RRA0 63 aa8.92□□□□□ -0.98
SMPD4-213ENST00000454468 ADARB2-AS1A8MUL3 147 aa8.92□□□□□ -0.98
SMPD4-213ENST00000454468 HERVK_113P61574 105 aa8.92□□□□□ -0.98
SMPD4-213ENST00000454468 C19orf54Q5BKX5 351 aa8.92□□□□□ -0.98
SMPD4-213ENST00000454468 CEMP1Q6PRD7 247 aaPredicted RBP8.92□□□□□ -0.98
SMPD4-213ENST00000454468 COX8CQ7Z4L0 72 aa8.92□□□□□ -0.98
SMPD4-213ENST00000454468 K7EMT4 169 aa8.92□□□□□ -0.98
SMPD4-213ENST00000454468 K7EQG2 157 aa8.92□□□□□ -0.98
SMPD4-213ENST00000454468 NPC2P61916 151 aa8.92□□□□□ -0.98
SMPD4-213ENST00000454468 NBEAL2Q6ZNJ1 2754 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 TRGV1A0A0A0MS02 117 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 SCGB1C2P0DMR2 95 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 PLNP26678 52 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 AMTNQ6UX39 209 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 GCN1Q92616 2671 aaKnown RBP8.91□□□□□ -0.98
SMPD4-213ENST00000454468 PPP1R17O96001 155 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 Q1RN00 199 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 SPXQ9BT56 116 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 VCX2Q9H322 139 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 WFDC2Q14508 124 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 ZFP2Q6ZN57 461 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 BAALCQ8WXS3 180 aa8.91□□□□□ -0.98
SMPD4-213ENST00000454468 LGALS3P17931 250 aaKnown RBP8.9□□□□□ -0.98
SMPD4-213ENST00000454468 A0A1W2PPM0 123 aa8.9□□□□□ -0.98
SMPD4-213ENST00000454468 HLA-DRB4P13762 266 aa8.9□□□□□ -0.98
SMPD4-213ENST00000454468 C20orf78Q9BR46 151 aa8.9□□□□□ -0.98
SMPD4-213ENST00000454468 HLA-DRB4X5D2U9 266 aa8.9□□□□□ -0.98
SMPD4-213ENST00000454468 TRGV11A0A075B6L2 103 aa8.89□□□□□ -0.99
SMPD4-213ENST00000454468 H3BRM9 83 aa8.89□□□□□ -0.99
SMPD4-213ENST00000454468 SIVA1O15304 175 aa8.89□□□□□ -0.99
SMPD4-213ENST00000454468 CD28P10747 220 aa8.89□□□□□ -0.99
SMPD4-213ENST00000454468 ATRQ13535 2644 aa8.89□□□□□ -0.99
SMPD4-213ENST00000454468 TRBV7-9A0A0J9YWB2 115 aa8.89□□□□□ -0.99
SMPD4-213ENST00000454468 CRIP2P52943 208 aaPredicted RBP8.89□□□□□ -0.99
SMPD4-213ENST00000454468 HHLA3Q9XRX5 114 aa8.89□□□□□ -0.99
SMPD4-213ENST00000454468 FGF6P10767 208 aa8.88□□□□□ -0.99
SMPD4-213ENST00000454468 C11orf86A6NJI1 115 aa8.88□□□□□ -0.99
SMPD4-213ENST00000454468 FOXI2Q6ZQN5 318 aa8.88□□□□□ -0.99
SMPD4-213ENST00000454468 SMR3AQ99954 134 aa8.88□□□□□ -0.99
SMPD4-213ENST00000454468 CITED2Q99967 270 aaPredicted RBP8.88□□□□□ -0.99
SMPD4-213ENST00000454468 IGLV2-18A0A075B6J9 118 aa8.88□□□□□ -0.99
SMPD4-213ENST00000454468 KLLNB2CW77 178 aa8.88□□□□□ -0.99
SMPD4-213ENST00000454468 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.87□□□□□ -0.99
SMPD4-213ENST00000454468 TRAV2A0A0B4J234 112 aa8.87□□□□□ -0.99
SMPD4-213ENST00000454468 IGKV2-29A2NJV5 120 aaPredicted RBP8.87□□□□□ -0.99
SMPD4-213ENST00000454468 PSMG3-AS1Q96PY0 264 aa8.87□□□□□ -0.99
SMPD4-213ENST00000454468 DNAJC9-AS1A6NH13 148 aa8.87□□□□□ -0.99
SMPD4-213ENST00000454468 TOMM6Q96B49 74 aa8.87□□□□□ -0.99
SMPD4-213ENST00000454468 WFDC10AQ9H1F0 79 aa8.87□□□□□ -0.99
SMPD4-213ENST00000454468 SETXQ7Z333 2677 aaKnown RBP8.87□□□□□ -0.99
SMPD4-213ENST00000454468 PSMB2P49721 201 aa8.87□□□□□ -0.99
SMPD4-213ENST00000454468 Q6ZSV7 163 aa8.87□□□□□ -0.99
SMPD4-213ENST00000454468 ZNF418Q8TF45 676 aaPredicted RBP8.87□□□□□ -0.99
SMPD4-213ENST00000454468 NIPBLQ6KC79 2804 aaeCLIP8.87□□□□□ -0.99
SMPD4-213ENST00000454468 UNC79Q9P2D8 2635 aa8.86□□□□□ -0.99
SMPD4-213ENST00000454468 TRGV2A0A075B6R0 118 aa8.86□□□□□ -0.99
SMPD4-213ENST00000454468 CCL24O00175 119 aa8.86□□□□□ -0.99
SMPD4-213ENST00000454468 PMVKQ15126 192 aa8.86□□□□□ -0.99
SMPD4-213ENST00000454468 A0A0J9YXV3 536 aa8.86□□□□□ -0.99
SMPD4-213ENST00000454468 MYMXA0A1B0GTQ4 84 aa8.86□□□□□ -0.99
SMPD4-213ENST00000454468 H3BMG7 143 aa8.86□□□□□ -0.99
SMPD4-213ENST00000454468 TRPT1Q86TN4 253 aaKnown RBP8.86□□□□□ -0.99
SMPD4-213ENST00000454468 GAGE5Q13069 117 aa8.86□□□□□ -0.99
SMPD4-213ENST00000454468 GAGE6Q13070 117 aa8.86□□□□□ -0.99
SMPD4-213ENST00000454468 UFSP1Q6NVU6 142 aa8.86□□□□□ -0.99
SMPD4-213ENST00000454468 ZNF625Q96I27 306 aaPredicted RBP8.86□□□□□ -0.99
SMPD4-213ENST00000454468 Q9UF83 564 aa8.86□□□□□ -0.99
SMPD4-213ENST00000454468 SPAG8Q99932 426 aaPredicted RBP8.85□□□□□ -0.99
SMPD4-213ENST00000454468 CEND1Q8N111 149 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 98.1 ms