RNA–Protein interactions for RNA: ENST00000453640.1

SSXP1-201, Transcript of SSX family pseudogene 1, humanhuman

BASIC

Gene SSXP1, Length 473 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP1-201ENST00000453640 I3L2K1 104 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 TGOLN2O43493 480 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 GNG7O60262 68 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 PRM2P04554 102 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 ZNF705DP0CH99 300 aaPredicted RBP1.23□□□□□ -2.21
SSXP1-201ENST00000453640 ZNF705BP0CI00 300 aaPredicted RBP1.23□□□□□ -2.21
SSXP1-201ENST00000453640 AKAIN1P0CW23 69 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 IAPPP10997 89 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 SNCAP37840 140 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 INSL3P51460 131 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 TMBIM6P55061 237 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 FXYD7P58549 80 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 SUPT4H1P63272 117 aaKnown RBP1.23□□□□□ -2.21
SSXP1-201ENST00000453640 ERHP84090 104 aaKnown RBP1.23□□□□□ -2.21
SSXP1-201ENST00000453640 ZNF90Q03938 601 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 CATR1Q13166 79 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 PPP1R1AQ13522 171 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 OR2F1Q13607 317 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 DEFB135Q30KP9 77 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 LPCAT3Q6P1A2 487 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 TOMM20LQ6UXN7 152 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 LINC00322Q6ZN03 302 aaPredicted RBP1.23□□□□□ -2.21
SSXP1-201ENST00000453640 Q6ZRU5 148 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 GPHB5Q86YW7 130 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 GDPD1Q8N9F7 314 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 TMEM75Q8N9X5 138 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 RNASE11Q8TAA1 199 aaKnown RBP1.23□□□□□ -2.21
SSXP1-201ENST00000453640 VSTM2AQ8TAG5 236 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 RAB2BQ8WUD1 216 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 SMIM4Q8WVI0 70 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 AP3S1Q92572 193 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 ACY3Q96HD9 319 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 RHPN1-AS1Q9BWJ2 59 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 TMEM222Q9H0R3 208 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 MED28Q9H204 178 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 NAA60Q9H7X0 242 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.23□□□□□ -2.21
SSXP1-201ENST00000453640 TMEM14BQ9NUH8 114 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 FKBP11Q9NYL4 201 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 SMPXQ9UHP9 88 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 PAIP2BQ9ULR5 123 aaKnown RBP1.23□□□□□ -2.21
SSXP1-201ENST00000453640 V9GYH0 126 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 DNAH6Q9C0G6 4158 aa1.23□□□□□ -2.21
SSXP1-201ENST00000453640 DNAH11Q96DT5 4516 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 TRAV14DV4A0A0A6YYC5 116 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 LINC00862A6NCI5 91 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 PLA2G10O15496 165 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 GSTZ1O43708 216 aaPredicted RBP1.22□□□□□ -2.21
SSXP1-201ENST00000453640 CREBL2O60519 120 aaPredicted RBP1.22□□□□□ -2.21
SSXP1-201ENST00000453640 SIX6O95475 246 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 DHFRP00374 187 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 IFNA10P01566 189 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 TYMSP04818 313 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 IFNA4P05014 189 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 ATP5G1P05496 136 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 SULT1A3P0DMM9 295 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 SULT1A4P0DMN0 295 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 HIST1H1BP16401 226 aaKnown RBP1.22□□□□□ -2.21
SSXP1-201ENST00000453640 NPPCP23582 126 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 HLA-DMBP28068 263 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 S100GP29377 79 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 S100A5P33763 92 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 DEFB131AP59861 70 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 SPCS3P61009 180 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 RRAS2P62070 204 aaPredicted RBP1.22□□□□□ -2.21
SSXP1-201ENST00000453640 POLR2GP62487 172 aaKnown RBP eCLIP1.22□□□□□ -2.21
SSXP1-201ENST00000453640 PRCDQ00LT1 54 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 MSMO1Q15800 293 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 KLK9Q2XQG4 91 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 GDF5OSQ5U4N7 250 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 TOMM5Q8N4H5 51 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 ZFAND2AQ8N6M9 145 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 LSM10Q969L4 123 aaKnown RBP1.22□□□□□ -2.21
SSXP1-201ENST00000453640 LINC00052Q96N35 136 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 PRRT1Q99946 306 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 PDCD10Q9BUL8 212 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 PBDC1Q9BVG4 233 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 GNB1LQ9BYB4 327 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 ENY2Q9NPA8 101 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 MRPL27Q9P0M9 148 aaKnown RBP1.22□□□□□ -2.21
SSXP1-201ENST00000453640 GSKIPQ9P0R6 139 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 RSL24D1Q9UHA3 163 aaKnown RBP1.22□□□□□ -2.21
SSXP1-201ENST00000453640 RABAC1Q9UI14 185 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 SCP2D1Q9UJQ7 156 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 KLK9Q9UKQ9 250 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 PRNDQ9UKY0 176 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 UFC1Q9Y3C8 167 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 MRPS16Q9Y3D3 137 aaKnown RBP1.22□□□□□ -2.21
SSXP1-201ENST00000453640 TMEM56-RWDD3S4R434 201 aa1.22□□□□□ -2.21
SSXP1-201ENST00000453640 PKHD1P08F94 4074 aa1.21□□□□□ -2.22
SSXP1-201ENST00000453640 TRAV8-1A0A0A6YYK1 113 aa1.21□□□□□ -2.22
SSXP1-201ENST00000453640 TRAV5A0A0B4J249 113 aa1.21□□□□□ -2.22
SSXP1-201ENST00000453640 C9orf170A2RU37 121 aa1.21□□□□□ -2.22
SSXP1-201ENST00000453640 FAM24AA6NFZ4 105 aa1.21□□□□□ -2.22
SSXP1-201ENST00000453640 ZNF705FA8MVS1 300 aaPredicted RBP1.21□□□□□ -2.22
SSXP1-201ENST00000453640 A8MWP6 167 aa1.21□□□□□ -2.22
SSXP1-201ENST00000453640 NDUFA4O00483 81 aa1.21□□□□□ -2.22
SSXP1-201ENST00000453640 CYB5BO43169 146 aa1.21□□□□□ -2.22
SSXP1-201ENST00000453640 SSSCA1O60232 199 aa1.21□□□□□ -2.22
SSXP1-201ENST00000453640 PITX3O75364 302 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms