RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 NEXN-AS1Q8NBZ9 246 aa10.22□□□□□ -0.77
SHANK2-210ENST00000449116 DNAJC30Q96LL9 226 aa10.22□□□□□ -0.77
SHANK2-210ENST00000449116 Q9UF83 564 aa10.22□□□□□ -0.77
SHANK2-210ENST00000449116 KLK5Q9Y337 293 aaPredicted RBP10.22□□□□□ -0.77
SHANK2-210ENST00000449116 GAS8-AS1O95177 125 aa10.21□□□□□ -0.77
SHANK2-210ENST00000449116 PPP1R17O96001 155 aa10.21□□□□□ -0.77
SHANK2-210ENST00000449116 RAB5AP20339 215 aa10.21□□□□□ -0.77
SHANK2-210ENST00000449116 RPS10P46783 165 aaKnown RBP10.21□□□□□ -0.77
SHANK2-210ENST00000449116 RPL36AP83881 106 aaKnown RBP10.21□□□□□ -0.77
SHANK2-210ENST00000449116 FABP9Q0Z7S8 132 aa10.21□□□□□ -0.77
SHANK2-210ENST00000449116 OR10J3Q5JRS4 329 aa10.21□□□□□ -0.77
SHANK2-210ENST00000449116 RPL36ALQ969Q0 106 aaKnown RBP10.21□□□□□ -0.77
SHANK2-210ENST00000449116 RPL39LQ96EH5 51 aaKnown RBP10.21□□□□□ -0.77
SHANK2-210ENST00000449116 NIT2Q9NQR4 276 aa10.21□□□□□ -0.77
SHANK2-210ENST00000449116 ICOSQ9Y6W8 199 aa10.21□□□□□ -0.77
SHANK2-210ENST00000449116 TRBV7-3A0A075B6L6 115 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 GAGE12JA6NER3 117 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 GAGE1Q13065 139 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 GAGE4Q13068 117 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 GAGE5Q13069 117 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 MRPL23Q16540 153 aaKnown RBP10.2□□□□□ -0.78
SHANK2-210ENST00000449116 KIAA1644Q3SXP7 199 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 GAGE13Q4V321 117 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 ZFAND6Q6FIF0 208 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 NRACQ8N912 160 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 C15orf53Q8NAA6 179 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 ZNRF2Q8NHG8 242 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 STARD9Q9P2P6 4700 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 TNFRSF18Q9Y5U5 241 aa10.2□□□□□ -0.78
SHANK2-210ENST00000449116 TRBV6-5A0A0K0K1A5 114 aa10.19□□□□□ -0.78
SHANK2-210ENST00000449116 NUDT3O95989 172 aa10.19□□□□□ -0.78
SHANK2-210ENST00000449116 LINC00694P0DN24 101 aa10.19□□□□□ -0.78
SHANK2-210ENST00000449116 SRIP30626 198 aa10.19□□□□□ -0.78
SHANK2-210ENST00000449116 PRELID3AQ96N28 172 aa10.19□□□□□ -0.78
SHANK2-210ENST00000449116 LAMTOR2Q9Y2Q5 125 aa10.19□□□□□ -0.78
SHANK2-210ENST00000449116 A0A096LPF7 62 aa10.18□□□□□ -0.78
SHANK2-210ENST00000449116 PHOX2AO14813 284 aa10.18□□□□□ -0.78
SHANK2-210ENST00000449116 TNFRSF6BO95407 300 aa10.18□□□□□ -0.78
SHANK2-210ENST00000449116 UBE2D3P61077 147 aa10.18□□□□□ -0.78
SHANK2-210ENST00000449116 UBE2D2P62837 147 aa10.18□□□□□ -0.78
SHANK2-210ENST00000449116 SH2D6Q7Z4S9 175 aa10.18□□□□□ -0.78
SHANK2-210ENST00000449116 CSMD3Q7Z407 3707 aa10.18□□□□□ -0.78
SHANK2-210ENST00000449116 C3orf84H3BNL1 204 aa10.17□□□□□ -0.78
SHANK2-210ENST00000449116 NPYP01303 97 aa10.17□□□□□ -0.78
SHANK2-210ENST00000449116 TCTAP57738 103 aa10.17□□□□□ -0.78
SHANK2-210ENST00000449116 PLECQ15149 4684 aaKnown RBP10.17□□□□□ -0.78
SHANK2-210ENST00000449116 ST20Q9HBF5 79 aa10.17□□□□□ -0.78
SHANK2-210ENST00000449116 SDHAF1A6NFY7 115 aa10.16□□□□□ -0.78
SHANK2-210ENST00000449116 TRGC2P03986 189 aa10.16□□□□□ -0.78
SHANK2-210ENST00000449116 SUMO2P61956 95 aaKnown RBP10.16□□□□□ -0.78
SHANK2-210ENST00000449116 NEGR1Q7Z3B1 354 aa10.16□□□□□ -0.78
SHANK2-210ENST00000449116 DAZ4Q86SG3 579 aaKnown RBP10.16□□□□□ -0.78
SHANK2-210ENST00000449116 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.16□□□□□ -0.78
SHANK2-210ENST00000449116 ATP6V0E2Q8NHE4 81 aa10.16□□□□□ -0.78
SHANK2-210ENST00000449116 C20orf78Q9BR46 151 aa10.16□□□□□ -0.78
SHANK2-210ENST00000449116 ALKBH7Q9BT30 221 aaPredicted RBP10.16□□□□□ -0.78
SHANK2-210ENST00000449116 DAZ3Q9NR90 486 aaKnown RBP10.16□□□□□ -0.78
SHANK2-210ENST00000449116 APLNQ9ULZ1 77 aa10.16□□□□□ -0.78
SHANK2-210ENST00000449116 TMEM70Q9BUB7 260 aa10.15□□□□□ -0.78
SHANK2-210ENST00000449116 IGHV3-38A0A0C4DH36 116 aa10.14□□□□□ -0.79
SHANK2-210ENST00000449116 POLR2KP53803 58 aaKnown RBP10.14□□□□□ -0.79
SHANK2-210ENST00000449116 RPL32P62910 135 aaKnown RBP10.14□□□□□ -0.79
SHANK2-210ENST00000449116 CASC10Q5T4H9 136 aa10.14□□□□□ -0.79
SHANK2-210ENST00000449116 MAP1LC3AQ9H492 121 aa10.14□□□□□ -0.79
SHANK2-210ENST00000449116 PRSS47A8MTI9 375 aa10.13□□□□□ -0.79
SHANK2-210ENST00000449116 I3L3M4 83 aa10.13□□□□□ -0.79
SHANK2-210ENST00000449116 GTSF1LQ9H1H1 148 aa10.13□□□□□ -0.79
SHANK2-210ENST00000449116 TRBV27A0A0K0K1C4 114 aa10.12□□□□□ -0.79
SHANK2-210ENST00000449116 VCYO14598 125 aa10.12□□□□□ -0.79
SHANK2-210ENST00000449116 PMCHP20382 165 aa10.12□□□□□ -0.79
SHANK2-210ENST00000449116 LYPD5Q6UWN5 251 aa10.12□□□□□ -0.79
SHANK2-210ENST00000449116 SMIM2Q9BVW6 85 aa10.12□□□□□ -0.79
SHANK2-210ENST00000449116 LOC389332A0A1B0GUA5 103 aa10.11□□□□□ -0.79
SHANK2-210ENST00000449116 TIRAPP58753 221 aa10.11□□□□□ -0.79
SHANK2-210ENST00000449116 TMEM97Q5BJF2 176 aa10.11□□□□□ -0.79
SHANK2-210ENST00000449116 COTL1Q14019 142 aa10.1□□□□□ -0.79
SHANK2-210ENST00000449116 ESRGQ1W209 222 aa10.1□□□□□ -0.79
SHANK2-210ENST00000449116 C18orf32Q8TCD1 76 aa10.1□□□□□ -0.79
SHANK2-210ENST00000449116 KIR2DL4Q99706 377 aa10.1□□□□□ -0.79
SHANK2-210ENST00000449116 IGLV2-18A0A075B6J9 118 aa10.09□□□□□ -0.79
SHANK2-210ENST00000449116 CCL18P55774 89 aa10.09□□□□□ -0.79
SHANK2-210ENST00000449116 IQCJQ1A5X6 159 aa10.09□□□□□ -0.79
SHANK2-210ENST00000449116 Q8N8P6 123 aa10.09□□□□□ -0.79
SHANK2-210ENST00000449116 NXT2Q9NPJ8 142 aaKnown RBP10.09□□□□□ -0.79
SHANK2-210ENST00000449116 TRBV6-8A0A0A6YYG3 113 aa10.08□□□□□ -0.8
SHANK2-210ENST00000449116 TCAPO15273 167 aa10.08□□□□□ -0.8
SHANK2-210ENST00000449116 TSHBP01222 138 aa10.08□□□□□ -0.8
SHANK2-210ENST00000449116 FCER1GP30273 86 aa10.08□□□□□ -0.8
SHANK2-210ENST00000449116 IFI27P40305 119 aaPredicted RBP10.08□□□□□ -0.8
SHANK2-210ENST00000449116 LELP1Q5T871 98 aa10.08□□□□□ -0.8
SHANK2-210ENST00000449116 DEFB104AQ8WTQ1 72 aa10.08□□□□□ -0.8
SHANK2-210ENST00000449116 NTM-AS1Q6ZSK4 140 aa10.07□□□□□ -0.8
SHANK2-210ENST00000449116 PRSS3P2Q8NHM4 247 aa10.07□□□□□ -0.8
SHANK2-210ENST00000449116 LINC00588Q9Y4M8 146 aa10.07□□□□□ -0.8
SHANK2-210ENST00000449116 TRBV25-1A0A075B6N4 114 aa10.06□□□□□ -0.8
SHANK2-210ENST00000449116 IGHV1-24A0A0C4DH33 117 aa10.06□□□□□ -0.8
SHANK2-210ENST00000449116 C1orf196B1AJZ1 125 aa10.06□□□□□ -0.8
SHANK2-210ENST00000449116 K7EMI3 77 aa10.06□□□□□ -0.8
SHANK2-210ENST00000449116 AMTP48728 403 aa10.06□□□□□ -0.8
SHANK2-210ENST00000449116 Q0VG73 95 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms