RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 MUC4Q99102 2169 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 TRAV12-2A0A075B6T6 113 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 CBY3A6NI87 242 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 A8MWV9 139 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 CCL24O00175 119 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 PRSS1P07477 247 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 LINC00315P59091 139 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 ZNF56Q15929 161 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 BATFQ16520 125 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 C18orf15Q96N68 181 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 CITED1Q99966 193 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 SPXQ9BT56 116 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 ZMAT5Q9UDW3 170 aaKnown RBP6.72□□□□□ -1.33
HDAC6-209ENST00000440653 CYSLTR1Q9Y271 337 aa6.72□□□□□ -1.33
HDAC6-209ENST00000440653 A0A087WX48 190 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 TRBV27A0A0K0K1C4 114 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 OR11H12B2RN74 326 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 F8VRH5 84 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 VCYO14598 125 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 IGKV3-20P01619 116 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 NSUN5P1Q3KNT7 163 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 CD300EQ496F6 205 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-209ENST00000440653 TMEM97Q5BJF2 176 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 PAPPA-AS1Q5QFB9 102 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 C2orf66Q6UXQ4 117 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 BOD1L2Q8IYS8 172 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 LINC00469Q8N7U9 141 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 LINC01006Q8NI28 216 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 RPL39LQ96EH5 51 aaKnown RBP6.71□□□□□ -1.34
HDAC6-209ENST00000440653 TIMM17AQ99595 171 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 CSTL1Q9H114 145 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 CSMD3Q7Z407 3707 aa6.71□□□□□ -1.34
HDAC6-209ENST00000440653 KNCNA6PVL3 124 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 F5H697 171 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 M0R2P5 195 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 CD28P10747 220 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 FGF6P10767 208 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 POLR2KP53803 58 aaKnown RBP6.7□□□□□ -1.34
HDAC6-209ENST00000440653 FXYD7P58549 80 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 SEC11AP67812 179 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 GAGE1Q13065 139 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 ERASQ7Z444 233 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 TMEM141Q96I45 108 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 DUX3Q96PT4 197 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 SCGB3A1Q96QR1 104 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 SELENOKQ9Y6D0 94 aa6.7□□□□□ -1.34
HDAC6-209ENST00000440653 RBMY1BA6NDE4 496 aaKnown RBP6.69□□□□□ -1.34
HDAC6-209ENST00000440653 RBMY1EA6NEQ0 496 aaKnown RBP6.69□□□□□ -1.34
HDAC6-209ENST00000440653 SDHAF1A6NFY7 115 aa6.69□□□□□ -1.34
HDAC6-209ENST00000440653 NPSP0C0P6 89 aa6.69□□□□□ -1.34
HDAC6-209ENST00000440653 RBMY1DP0C7P1 496 aaKnown RBP6.69□□□□□ -1.34
HDAC6-209ENST00000440653 HSD52Q0P140 79 aa6.69□□□□□ -1.34
HDAC6-209ENST00000440653 ODF3L2Q3SX64 289 aa6.69□□□□□ -1.34
HDAC6-209ENST00000440653 ZNF876PQ49A33 203 aa6.69□□□□□ -1.34
HDAC6-209ENST00000440653 SAMD5Q5TGI4 173 aa6.69□□□□□ -1.34
HDAC6-209ENST00000440653 FAM74A4Q5TZK3 123 aa6.69□□□□□ -1.34
HDAC6-209ENST00000440653 STHQ8IWL8 128 aa6.69□□□□□ -1.34
HDAC6-209ENST00000440653 CITED2Q99967 270 aaPredicted RBP6.69□□□□□ -1.34
HDAC6-209ENST00000440653 MDFICQ9P1T7 246 aa6.69□□□□□ -1.34
HDAC6-209ENST00000440653 HIGD1BQ9P298 99 aa6.69□□□□□ -1.34
HDAC6-209ENST00000440653 A0A087WWL8 130 aa6.68□□□□□ -1.34
HDAC6-209ENST00000440653 M0QY20 66 aa6.68□□□□□ -1.34
HDAC6-209ENST00000440653 CRYGDP07320 174 aa6.68□□□□□ -1.34
HDAC6-209ENST00000440653 RBMY1A1P0DJD3 496 aaKnown RBP6.68□□□□□ -1.34
HDAC6-209ENST00000440653 RBMY1CP0DJD4 496 aa6.68□□□□□ -1.34
HDAC6-209ENST00000440653 HINT1P49773 126 aaPredicted RBP6.68□□□□□ -1.34
HDAC6-209ENST00000440653 RBMY1FQ15415 496 aaKnown RBP6.68□□□□□ -1.34
HDAC6-209ENST00000440653 ZFP2Q6ZN57 461 aa6.68□□□□□ -1.34
HDAC6-209ENST00000440653 C2orf91Q6ZV80 131 aa6.68□□□□□ -1.34
HDAC6-209ENST00000440653 NDUFA11Q86Y39 141 aa6.68□□□□□ -1.34
HDAC6-209ENST00000440653 NEXN-AS1Q8NBZ9 246 aa6.68□□□□□ -1.34
HDAC6-209ENST00000440653 MCRIP2Q9BUT9 160 aaKnown RBP6.68□□□□□ -1.34
HDAC6-209ENST00000440653 DKK2Q9UBU2 259 aa6.68□□□□□ -1.34
HDAC6-209ENST00000440653 A0A1W2PRX2 142 aa6.67□□□□□ -1.34
HDAC6-209ENST00000440653 A6NDN8 102 aa6.67□□□□□ -1.34
HDAC6-209ENST00000440653 NMUP48645 174 aa6.67□□□□□ -1.34
HDAC6-209ENST00000440653 PROK1P58294 105 aa6.67□□□□□ -1.34
HDAC6-209ENST00000440653 BVES-AS1Q5T3Y7 98 aa6.67□□□□□ -1.34
HDAC6-209ENST00000440653 ZC2HC1BQ5TFG8 222 aa6.67□□□□□ -1.34
HDAC6-209ENST00000440653 STPG4Q8N801 248 aa6.67□□□□□ -1.34
HDAC6-209ENST00000440653 ORAOV1Q8WV07 137 aa6.67□□□□□ -1.34
HDAC6-209ENST00000440653 BAALCQ8WXS3 180 aa6.67□□□□□ -1.34
HDAC6-209ENST00000440653 C1QTNF4Q9BXJ3 329 aa6.67□□□□□ -1.34
HDAC6-209ENST00000440653 MRPL35Q9NZE8 188 aaKnown RBP6.67□□□□□ -1.34
HDAC6-209ENST00000440653 TP53TG1Q9Y2A0 90 aa6.67□□□□□ -1.34
HDAC6-209ENST00000440653 CHTOPQ9Y3Y2 248 aaKnown RBP6.67□□□□□ -1.34
HDAC6-209ENST00000440653 AGRNO00468 2067 aa6.66□□□□□ -1.34
HDAC6-209ENST00000440653 I3L3M4 83 aa6.66□□□□□ -1.34
HDAC6-209ENST00000440653 SAP30O75446 220 aa6.66□□□□□ -1.34
HDAC6-209ENST00000440653 IGLV1-51P01701 117 aa6.66□□□□□ -1.34
HDAC6-209ENST00000440653 HERVK_113P61574 105 aa6.66□□□□□ -1.34
HDAC6-209ENST00000440653 MPV17L2Q567V2 206 aa6.66□□□□□ -1.34
HDAC6-209ENST00000440653 MORN3Q6PF18 240 aaPredicted RBP6.66□□□□□ -1.34
HDAC6-209ENST00000440653 C11orf72Q8NBR9 251 aa6.66□□□□□ -1.34
HDAC6-209ENST00000440653 OR11H2Q8NH07 326 aa6.66□□□□□ -1.34
HDAC6-209ENST00000440653 IL17DQ8TAD2 202 aa6.66□□□□□ -1.34
HDAC6-209ENST00000440653 DNAJC30Q96LL9 226 aa6.66□□□□□ -1.34
HDAC6-209ENST00000440653 DNAH7Q8WXX0 4024 aa6.66□□□□□ -1.34
HDAC6-209ENST00000440653 SPRY2O43597 315 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms