RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 FAM74A4Q5TZK3 123 aa9.89□□□□□ -0.83
SNRNP200-202ENST00000429650 PLEKHB2Q96CS7 222 aa9.89□□□□□ -0.83
SNRNP200-202ENST00000429650 TRBV6-5A0A0K0K1A5 114 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 TRBV27A0A0K0K1C4 114 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 TEX48A0A1B0GUV7 120 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 K7EQG2 157 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 EMP1P54849 157 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 SNRPD3P62318 126 aaKnown RBP9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 RPL24P83731 157 aaKnown RBP9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 PAPPA-AS1Q5QFB9 102 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 TMEM141Q96I45 108 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 TIMM17AQ99595 171 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 PPDPFQ9H3Y8 114 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 ANKRD17O75179 2603 aaKnown RBP9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 TMEM89A2RUT3 159 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 SCGB1D4Q6XE38 83 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 Q8N1Y9 231 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 KLHL30-AS1Q8NEE0 82 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 TEX15Q9BXT5 2789 aa9.88□□□□□ -0.83
SNRNP200-202ENST00000429650 SETD2Q9BYW2 2564 aaPredicted RBP9.87□□□□□ -0.83
SNRNP200-202ENST00000429650 F8W1H4 67 aa9.87□□□□□ -0.83
SNRNP200-202ENST00000429650 H3BMG7 143 aa9.87□□□□□ -0.83
SNRNP200-202ENST00000429650 MORN3Q6PF18 240 aaPredicted RBP9.87□□□□□ -0.83
SNRNP200-202ENST00000429650 SYT8Q8NBV8 401 aa9.87□□□□□ -0.83
SNRNP200-202ENST00000429650 MYO9AB2RTY4 2548 aa9.87□□□□□ -0.83
SNRNP200-202ENST00000429650 HOXA3O43365 443 aaPredicted RBP9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 DSCR9P59020 149 aa9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 HERVK_113P61574 105 aa9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 WFDC2Q14508 124 aa9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 SPINK13Q1W4C9 94 aa9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 AMTNQ6UX39 209 aa9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 IGHV1OR15-1A0A075B7D0 117 aa9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 M0QY20 66 aa9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 SYNJ2BPP57105 145 aa9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 ZNF56Q15929 161 aa9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 LINC01356Q8N9X3 169 aa9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 ZNF256Q9Y2P7 627 aaPredicted RBP9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 SONP18583 2426 aaKnown RBP9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 NF1P21359 2839 aa9.86□□□□□ -0.83
SNRNP200-202ENST00000429650 AKAP9Q99996 3911 aa9.85□□□□□ -0.83
SNRNP200-202ENST00000429650 SRSF9Q13242 221 aaKnown RBP eCLIP9.85□□□□□ -0.83
SNRNP200-202ENST00000429650 ZNF876PQ49A33 203 aa9.85□□□□□ -0.83
SNRNP200-202ENST00000429650 SMIM9A6NGZ8 99 aa9.85□□□□□ -0.83
SNRNP200-202ENST00000429650 ZNRF2Q8NHG8 242 aa9.85□□□□□ -0.83
SNRNP200-202ENST00000429650 SPANXB1Q9NS25 103 aaPredicted RBP9.85□□□□□ -0.83
SNRNP200-202ENST00000429650 EPG5Q9HCE0 2579 aa9.84□□□□□ -0.83
SNRNP200-202ENST00000429650 UBE2D1P51668 147 aa9.84□□□□□ -0.83
SNRNP200-202ENST00000429650 NIPBLQ6KC79 2804 aaeCLIP9.84□□□□□ -0.83
SNRNP200-202ENST00000429650 A0A096LNT2 108 aa9.84□□□□□ -0.83
SNRNP200-202ENST00000429650 A0A0J9YY99 117 aa9.84□□□□□ -0.83
SNRNP200-202ENST00000429650 TSPEAR-AS2P59090 65 aa9.84□□□□□ -0.83
SNRNP200-202ENST00000429650 TMEM170BQ5T4T1 132 aa9.84□□□□□ -0.83
SNRNP200-202ENST00000429650 RHOHQ15669 191 aa9.83□□□□□ -0.84
SNRNP200-202ENST00000429650 NSUN5P1Q3KNT7 163 aa9.83□□□□□ -0.84
SNRNP200-202ENST00000429650 HIST2H2BDQ6DRA6 164 aa9.83□□□□□ -0.84
SNRNP200-202ENST00000429650 TRPT1Q86TN4 253 aaKnown RBP9.83□□□□□ -0.84
SNRNP200-202ENST00000429650 PRO0461Q9UI25 63 aa9.83□□□□□ -0.84
SNRNP200-202ENST00000429650 USP24Q9UPU5 2620 aa9.83□□□□□ -0.84
SNRNP200-202ENST00000429650 B5MCH6 92 aa9.83□□□□□ -0.84
SNRNP200-202ENST00000429650 PRB1P04280 392 aa9.83□□□□□ -0.84
SNRNP200-202ENST00000429650 NAV2Q8IVL1 2488 aa9.83□□□□□ -0.84
SNRNP200-202ENST00000429650 MRPL16Q9NX20 251 aaKnown RBP9.83□□□□□ -0.84
SNRNP200-202ENST00000429650 HOXD3P31249 432 aaPredicted RBP9.82□□□□□ -0.84
SNRNP200-202ENST00000429650 GAGE13Q4V321 117 aa9.82□□□□□ -0.84
SNRNP200-202ENST00000429650 F5H768 121 aa9.82□□□□□ -0.84
SNRNP200-202ENST00000429650 J3QLI3 93 aa9.82□□□□□ -0.84
SNRNP200-202ENST00000429650 P0DMU3 169 aa9.82□□□□□ -0.84
SNRNP200-202ENST00000429650 FAM231AP0DMU4 169 aa9.82□□□□□ -0.84
SNRNP200-202ENST00000429650 FAM231CP0DMU5 169 aa9.82□□□□□ -0.84
SNRNP200-202ENST00000429650 OPRPNQ99935 248 aaPredicted RBP9.82□□□□□ -0.84
SNRNP200-202ENST00000429650 ELANEP08246 267 aa9.81□□□□□ -0.84
SNRNP200-202ENST00000429650 ETDBQ3ZM63 59 aa9.81□□□□□ -0.84
SNRNP200-202ENST00000429650 SH2D6Q7Z4S9 175 aa9.81□□□□□ -0.84
SNRNP200-202ENST00000429650 NFE4Q86UQ8 179 aa9.81□□□□□ -0.84
SNRNP200-202ENST00000429650 MRAPQ8TCY5 172 aa9.81□□□□□ -0.84
SNRNP200-202ENST00000429650 AMELXQ99217 191 aa9.81□□□□□ -0.84
SNRNP200-202ENST00000429650 ZNF702PQ9H963 129 aa9.81□□□□□ -0.84
SNRNP200-202ENST00000429650 TRGV11A0A075B6L2 103 aa9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 RS1O15537 224 aa9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 TIRAPP58753 221 aa9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 RNF183Q96D59 192 aa9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 UBE2E2Q96LR5 201 aa9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 CCDC168Q8NDH2 2452 aa9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 J3QQQ9 107 aa9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 RBMY1A1P0DJD3 496 aaKnown RBP9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 RBMY1CP0DJD4 496 aa9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 RBMY1FQ15415 496 aaKnown RBP9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 C20orf203Q8NBC4 194 aa9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 ERG28Q9UKR5 140 aa9.8□□□□□ -0.84
SNRNP200-202ENST00000429650 I3L3M4 83 aa9.79□□□□□ -0.84
SNRNP200-202ENST00000429650 APOMO95445 188 aa9.79□□□□□ -0.84
SNRNP200-202ENST00000429650 SLC25A29Q8N8R3 303 aa9.79□□□□□ -0.84
SNRNP200-202ENST00000429650 IGHV3-30P01768 117 aa9.79□□□□□ -0.84
SNRNP200-202ENST00000429650 IGHV3-30-5P0DP03 117 aa9.79□□□□□ -0.84
SNRNP200-202ENST00000429650 NOTCH3Q9UM47 2321 aa9.78□□□□□ -0.84
SNRNP200-202ENST00000429650 NDUFA11Q86Y39 141 aa9.78□□□□□ -0.84
SNRNP200-202ENST00000429650 KNCNA6PVL3 124 aa9.78□□□□□ -0.84
SNRNP200-202ENST00000429650 J3QR89 54 aa9.78□□□□□ -0.84
SNRNP200-202ENST00000429650 LGALS3P17931 250 aaKnown RBP9.78□□□□□ -0.84
SNRNP200-202ENST00000429650 Q6YL49 198 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms