RNA–Protein interactions for RNA: ENST00000428776.1

HMGB3P4-201, Transcript of high mobility group box 3 pseudogene 4, humanhuman

BASIC

Gene HMGB3P4, Length 514 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P4-201ENST00000428776 DEFB130AP0DP74 79 aa9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 S100A2P29034 98 aa9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 SUMO2P61956 95 aaKnown RBP9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 RPL32P62910 135 aaKnown RBP9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 RNASEKQ6P5S7 137 aaKnown RBP9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 FA2HQ7L5A8 372 aa9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 Q8N8P6 123 aa9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 URB1-AS1Q96HZ7 61 aa9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 TM2D3Q9BRN9 247 aa9.04□□□□□ -0.96
HMGB3P4-201ENST00000428776 LOC105371267A0A1B0GV96 52 aa9.03□□□□□ -0.96
HMGB3P4-201ENST00000428776 LINC01546A6NGU7 62 aa9.03□□□□□ -0.96
HMGB3P4-201ENST00000428776 HSBP1O75506 76 aa9.03□□□□□ -0.96
HMGB3P4-201ENST00000428776 Q6ZSN1 163 aa9.03□□□□□ -0.96
HMGB3P4-201ENST00000428776 SMIM2Q9BVW6 85 aa9.03□□□□□ -0.96
HMGB3P4-201ENST00000428776 C11orf68Q9H3H3 251 aaKnown RBP9.03□□□□□ -0.96
HMGB3P4-201ENST00000428776 AP5S1Q9NUS5 200 aa9.03□□□□□ -0.96
HMGB3P4-201ENST00000428776 TENM3Q9P273 2699 aa9.02□□□□□ -0.97
HMGB3P4-201ENST00000428776 IGLV2-18A0A075B6J9 118 aa9.02□□□□□ -0.97
HMGB3P4-201ENST00000428776 TRGV4A0A0C4DH28 118 aa9.02□□□□□ -0.97
HMGB3P4-201ENST00000428776 DAD1P61803 113 aa9.02□□□□□ -0.97
HMGB3P4-201ENST00000428776 PDZD11Q5EBL8 140 aa9.02□□□□□ -0.97
HMGB3P4-201ENST00000428776 MRAPQ8TCY5 172 aa9.02□□□□□ -0.97
HMGB3P4-201ENST00000428776 TMEM18Q96B42 140 aa9.02□□□□□ -0.97
HMGB3P4-201ENST00000428776 DNAJC30Q96LL9 226 aa9.02□□□□□ -0.97
HMGB3P4-201ENST00000428776 TRBV10-1A0A0K0K1A3 114 aa9.01□□□□□ -0.97
HMGB3P4-201ENST00000428776 TRBV6-4A0A1B0GX49 114 aa9.01□□□□□ -0.97
HMGB3P4-201ENST00000428776 K7EMI3 77 aa9.01□□□□□ -0.97
HMGB3P4-201ENST00000428776 VCYO14598 125 aa9.01□□□□□ -0.97
HMGB3P4-201ENST00000428776 POLR2KP53803 58 aaKnown RBP9.01□□□□□ -0.97
HMGB3P4-201ENST00000428776 FHL2Q14192 279 aa9.01□□□□□ -0.97
HMGB3P4-201ENST00000428776 PACRGQ96M98 296 aaPredicted RBP9.01□□□□□ -0.97
HMGB3P4-201ENST00000428776 TNFRSF18Q9Y5U5 241 aa9.01□□□□□ -0.97
HMGB3P4-201ENST00000428776 TRBV27A0A0K0K1C4 114 aa9□□□□□ -0.97
HMGB3P4-201ENST00000428776 SDHAF1A6NFY7 115 aa9□□□□□ -0.97
HMGB3P4-201ENST00000428776 IFITM10A6NMD0 228 aa9□□□□□ -0.97
HMGB3P4-201ENST00000428776 K7EQD1 137 aa9□□□□□ -0.97
HMGB3P4-201ENST00000428776 SLC25A29Q8N8R3 303 aa9□□□□□ -0.97
HMGB3P4-201ENST00000428776 HIST1H2BLQ99880 126 aa9□□□□□ -0.97
HMGB3P4-201ENST00000428776 TMEM70Q9BUB7 260 aa9□□□□□ -0.97
HMGB3P4-201ENST00000428776 ZMAT4Q9H898 229 aa9□□□□□ -0.97
HMGB3P4-201ENST00000428776 CELA1Q9UNI1 258 aa9□□□□□ -0.97
HMGB3P4-201ENST00000428776 ATP5G1P05496 136 aa8.99□□□□□ -0.97
HMGB3P4-201ENST00000428776 P0DMU3 169 aa8.99□□□□□ -0.97
HMGB3P4-201ENST00000428776 FAM231AP0DMU4 169 aa8.99□□□□□ -0.97
HMGB3P4-201ENST00000428776 FAM231CP0DMU5 169 aa8.99□□□□□ -0.97
HMGB3P4-201ENST00000428776 FABP4P15090 132 aa8.99□□□□□ -0.97
HMGB3P4-201ENST00000428776 AMTP48728 403 aa8.99□□□□□ -0.97
HMGB3P4-201ENST00000428776 FAM19A2Q8N3H0 131 aa8.99□□□□□ -0.97
HMGB3P4-201ENST00000428776 NEXN-AS1Q8NBZ9 246 aa8.99□□□□□ -0.97
HMGB3P4-201ENST00000428776 IGHV1-24A0A0C4DH33 117 aa8.98□□□□□ -0.97
HMGB3P4-201ENST00000428776 TCAPO15273 167 aa8.98□□□□□ -0.97
HMGB3P4-201ENST00000428776 RPL36AP83881 106 aaKnown RBP8.98□□□□□ -0.97
HMGB3P4-201ENST00000428776 LAGE3Q14657 143 aa8.98□□□□□ -0.97
HMGB3P4-201ENST00000428776 RHOHQ15669 191 aa8.98□□□□□ -0.97
HMGB3P4-201ENST00000428776 ORMDL2Q53FV1 153 aa8.98□□□□□ -0.97
HMGB3P4-201ENST00000428776 RPL36ALQ969Q0 106 aaKnown RBP8.98□□□□□ -0.97
HMGB3P4-201ENST00000428776 KIR2DL4Q99706 377 aa8.98□□□□□ -0.97
HMGB3P4-201ENST00000428776 B9D2Q9BPU9 175 aa8.98□□□□□ -0.97
HMGB3P4-201ENST00000428776 PRADC1Q9BSG0 188 aa8.98□□□□□ -0.97
HMGB3P4-201ENST00000428776 HHLA3Q9XRX5 114 aa8.98□□□□□ -0.97
HMGB3P4-201ENST00000428776 COL7A1Q02388 2944 aa8.97□□□□□ -0.97
HMGB3P4-201ENST00000428776 TRBV7-3A0A075B6L6 115 aa8.97□□□□□ -0.97
HMGB3P4-201ENST00000428776 A0A0J9YWU9 116 aa8.97□□□□□ -0.97
HMGB3P4-201ENST00000428776 I3L3M4 83 aa8.97□□□□□ -0.97
HMGB3P4-201ENST00000428776 Q9UF83 564 aa8.97□□□□□ -0.97
HMGB3P4-201ENST00000428776 PRO0255Q9UI72 69 aa8.97□□□□□ -0.97
HMGB3P4-201ENST00000428776 G0S2P27469 103 aa8.96□□□□□ -0.98
HMGB3P4-201ENST00000428776 FCER1GP30273 86 aa8.96□□□□□ -0.98
HMGB3P4-201ENST00000428776 CRYBA4P53673 196 aa8.96□□□□□ -0.98
HMGB3P4-201ENST00000428776 PMCHL1Q16048 86 aa8.96□□□□□ -0.98
HMGB3P4-201ENST00000428776 C12orf74Q32Q52 190 aa8.96□□□□□ -0.98
HMGB3P4-201ENST00000428776 ZNRF2Q8NHG8 242 aa8.96□□□□□ -0.98
HMGB3P4-201ENST00000428776 HBDP02042 147 aa8.95□□□□□ -0.98
HMGB3P4-201ENST00000428776 NEGR1Q7Z3B1 354 aa8.95□□□□□ -0.98
HMGB3P4-201ENST00000428776 MEGF8Q7Z7M0 2845 aa8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 A0A096LNJ9 63 aa8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 LEPROTL1O95214 131 aa8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 NUDT3O95989 172 aa8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 TSHBP01222 138 aa8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 AKR1D1P51857 326 aa8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 UBE2D3P61077 147 aa8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 UBE2D2P62837 147 aa8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 DAZ4Q86SG3 579 aaKnown RBP8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 OR10D4PQ8NGN7 298 aa8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 C11orf45Q8TAV5 145 aa8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 DAZ3Q9NR90 486 aaKnown RBP8.94□□□□□ -0.98
HMGB3P4-201ENST00000428776 GAGE12JA6NER3 117 aa8.93□□□□□ -0.98
HMGB3P4-201ENST00000428776 LINC01549A6NIU2 74 aa8.93□□□□□ -0.98
HMGB3P4-201ENST00000428776 F5H768 121 aa8.93□□□□□ -0.98
HMGB3P4-201ENST00000428776 PAX4O43316 350 aa8.93□□□□□ -0.98
HMGB3P4-201ENST00000428776 NHLRC4P0CG21 123 aaPredicted RBP8.93□□□□□ -0.98
HMGB3P4-201ENST00000428776 GAGE1Q13065 139 aa8.93□□□□□ -0.98
HMGB3P4-201ENST00000428776 GAGE4Q13068 117 aa8.93□□□□□ -0.98
HMGB3P4-201ENST00000428776 GAGE5Q13069 117 aa8.93□□□□□ -0.98
HMGB3P4-201ENST00000428776 GAGE13Q4V321 117 aa8.93□□□□□ -0.98
HMGB3P4-201ENST00000428776 HSPB8Q9UJY1 196 aa8.93□□□□□ -0.98
HMGB3P4-201ENST00000428776 LOC100131303A0A0U1RQF7 123 aa8.92□□□□□ -0.98
HMGB3P4-201ENST00000428776 HTN3P15516 51 aa8.92□□□□□ -0.98
HMGB3P4-201ENST00000428776 BTF3P20290 206 aaKnown RBP8.92□□□□□ -0.98
HMGB3P4-201ENST00000428776 DEFA6Q01524 100 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms