RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 HIST2H2BEQ16778 126 aa5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 FAM222AQ5U5X8 452 aa5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 HIST1H2BHQ93079 126 aa5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 PRELID3AQ96N28 172 aa5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 HIST1H2BNQ99877 126 aa5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 HIST1H2BMQ99879 126 aa5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 SAMD10Q9BYL1 202 aa5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 C11orf68Q9H3H3 251 aaKnown RBP5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 JPT2Q9H910 190 aa5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 RETNQ9HD89 108 aa5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 DKK2Q9UBU2 259 aa5.88□□□□□ -1.47
SMARCAL1-206ENST00000427645 ALMS1Q8TCU4 4167 aa5.87□□□□□ -1.47
SMARCAL1-206ENST00000427645 PRSS47A8MTI9 375 aa5.87□□□□□ -1.47
SMARCAL1-206ENST00000427645 D6R8Y8 96 aa5.87□□□□□ -1.47
SMARCAL1-206ENST00000427645 IGHV3-53P01767 116 aa5.87□□□□□ -1.47
SMARCAL1-206ENST00000427645 DAD1P61803 113 aa5.87□□□□□ -1.47
SMARCAL1-206ENST00000427645 UFSP1Q6NVU6 142 aa5.87□□□□□ -1.47
SMARCAL1-206ENST00000427645 DNAJC30Q96LL9 226 aa5.87□□□□□ -1.47
SMARCAL1-206ENST00000427645 C20orf78Q9BR46 151 aa5.87□□□□□ -1.47
SMARCAL1-206ENST00000427645 NIT2Q9NQR4 276 aa5.87□□□□□ -1.47
SMARCAL1-206ENST00000427645 TRGV4A0A0C4DH28 118 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 TRBV6-4A0A1B0GX49 114 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 M0QY20 66 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 TNFRSF6BO95407 300 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 DEFB130BP0DP73 79 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 DEFB130AP0DP74 79 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 NDUFA6P56556 154 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 SUMO4Q6EEV6 95 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 BAGE3Q86Y29 109 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 PRSS3P2Q8NHM4 247 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 C18orf32Q8TCD1 76 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 KRTAP17-1Q9BYP8 105 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 MAP1LC3AQ9H492 121 aa5.86□□□□□ -1.47
SMARCAL1-206ENST00000427645 TRBV10-1A0A0K0K1A3 114 aa5.85□□□□□ -1.47
SMARCAL1-206ENST00000427645 TRBV6-5A0A0K0K1A5 114 aa5.85□□□□□ -1.47
SMARCAL1-206ENST00000427645 K7EMI3 77 aa5.85□□□□□ -1.47
SMARCAL1-206ENST00000427645 DEFB4AO15263 64 aa5.85□□□□□ -1.47
SMARCAL1-206ENST00000427645 ATP5G1P05496 136 aa5.85□□□□□ -1.47
SMARCAL1-206ENST00000427645 COA6Q5JTJ3 125 aaKnown RBP5.85□□□□□ -1.47
SMARCAL1-206ENST00000427645 ZNF479Q96JC4 524 aa5.85□□□□□ -1.47
SMARCAL1-206ENST00000427645 ST20Q9HBF5 79 aa5.85□□□□□ -1.47
SMARCAL1-206ENST00000427645 NXT2Q9NPJ8 142 aaKnown RBP5.85□□□□□ -1.47
SMARCAL1-206ENST00000427645 HHLA3Q9XRX5 114 aa5.85□□□□□ -1.47
SMARCAL1-206ENST00000427645 TMA7Q9Y2S6 64 aaKnown RBP5.85□□□□□ -1.47
SMARCAL1-206ENST00000427645 IGHV3-73A0A0B4J1V6 119 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 TRAV26-2A0A0B4J265 109 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 SMKR1H3BMG3 65 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 VCYO14598 125 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 TCAPO15273 167 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 NPYP01303 97 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 LINC00614P0C842 121 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 PMCHP20382 165 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 G0S2P27469 103 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 SUMO2P61956 95 aaKnown RBP5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 RPL32P62910 135 aaKnown RBP5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 FHL2Q14192 279 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 NIT1Q86X76 327 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 NRACQ8N912 160 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 CHCHD1Q96BP2 118 aaKnown RBP5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 PRADC1Q9BSG0 188 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 PRO0255Q9UI72 69 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 TNFRSF18Q9Y5U5 241 aa5.84□□□□□ -1.47
SMARCAL1-206ENST00000427645 TRBV7-3A0A075B6L6 115 aa5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 A0A0J9YWU9 116 aa5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 LOC389332A0A1B0GUA5 103 aa5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 NCR2O95944 276 aa5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 GATA1P15976 413 aaPredicted RBP5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 POLR2KP53803 58 aaKnown RBP5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 RPL36AP83881 106 aaKnown RBP5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 RHOHQ15669 191 aa5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 FA2HQ7L5A8 372 aa5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 Q8N8P6 123 aa5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 SLC25A29Q8N8R3 303 aa5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 C11orf45Q8TAV5 145 aa5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 RPL36ALQ969Q0 106 aaKnown RBP5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 FRAS1Q86XX4 4008 aa5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 NACAE9PAV3 2078 aa5.83□□□□□ -1.48
SMARCAL1-206ENST00000427645 C5orf52A6NGY3 159 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 I3L3M4 83 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 K7EQD1 137 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 HSBP1O75506 76 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 GAS8-AS1O95177 125 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 ESDP10768 282 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 HOXA5P20719 270 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 IFI27P40305 119 aaPredicted RBP5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 CRYBA4P53673 196 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 SNRPEP62304 92 aaKnown RBP5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 C12orf74Q32Q52 190 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 Q6ZSN1 163 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 RPL39LQ96EH5 51 aaKnown RBP5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 KIR2DL4Q99706 377 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 AP5S1Q9NUS5 200 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 CELA1Q9UNI1 258 aa5.82□□□□□ -1.48
SMARCAL1-206ENST00000427645 TRBV27A0A0K0K1C4 114 aa5.81□□□□□ -1.48
SMARCAL1-206ENST00000427645 SDHAF1A6NFY7 115 aa5.81□□□□□ -1.48
SMARCAL1-206ENST00000427645 LINC01546A6NGU7 62 aa5.81□□□□□ -1.48
SMARCAL1-206ENST00000427645 LINC01549A6NIU2 74 aa5.81□□□□□ -1.48
SMARCAL1-206ENST00000427645 PAX4O43316 350 aa5.81□□□□□ -1.48
SMARCAL1-206ENST00000427645 S100A2P29034 98 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms