RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 LINC01587Q99440 93 aa8.09□□□□□ -1.11
DDX56-203ENST00000421223 KIR2DL4Q99706 377 aa8.09□□□□□ -1.11
DDX56-203ENST00000421223 SMR3AQ99954 134 aa8.09□□□□□ -1.11
DDX56-203ENST00000421223 GTSF1LQ9H1H1 148 aa8.09□□□□□ -1.11
DDX56-203ENST00000421223 XCL2Q9UBD3 114 aa8.09□□□□□ -1.11
DDX56-203ENST00000421223 TRAV25A0A0B4J276 109 aa8.09□□□□□ -1.11
DDX56-203ENST00000421223 PROK1P58294 105 aa8.09□□□□□ -1.11
DDX56-203ENST00000421223 LINC00315P59091 139 aa8.09□□□□□ -1.11
DDX56-203ENST00000421223 A0A087WX48 190 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 J3QKU1 62 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 P0DMU3 169 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 FAM231AP0DMU4 169 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 FAM231CP0DMU5 169 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 AZU1P20160 251 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 KIF25-AS1Q9Y6Z4 181 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 MED14OSP0DP75 135 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 C4orf3Q8WVX3 66 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 TSSC4Q9Y5U2 329 aaPredicted RBP8.08□□□□□ -1.12
DDX56-203ENST00000421223 PRSS29PA6NIE9 313 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 JMJD8Q96S16 334 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 OPRPNQ99935 248 aaPredicted RBP8.08□□□□□ -1.12
DDX56-203ENST00000421223 CYSLTR1Q9Y271 337 aa8.08□□□□□ -1.12
DDX56-203ENST00000421223 GCN1Q92616 2671 aaKnown RBP8.07□□□□□ -1.12
DDX56-203ENST00000421223 H3BMM0 161 aa8.07□□□□□ -1.12
DDX56-203ENST00000421223 H7C1H1 209 aa8.07□□□□□ -1.12
DDX56-203ENST00000421223 AMTNQ6UX39 209 aa8.07□□□□□ -1.12
DDX56-203ENST00000421223 MAPKAPK5-AS1Q8N8E1 139 aa8.07□□□□□ -1.12
DDX56-203ENST00000421223 TOMM6Q96B49 74 aa8.07□□□□□ -1.12
DDX56-203ENST00000421223 RAX2Q96IS3 184 aa8.07□□□□□ -1.12
DDX56-203ENST00000421223 SETXQ7Z333 2677 aaKnown RBP8.07□□□□□ -1.12
DDX56-203ENST00000421223 RBMY1BA6NDE4 496 aaKnown RBP8.07□□□□□ -1.12
DDX56-203ENST00000421223 RBMY1EA6NEQ0 496 aaKnown RBP8.07□□□□□ -1.12
DDX56-203ENST00000421223 RBMY1DP0C7P1 496 aaKnown RBP8.07□□□□□ -1.12
DDX56-203ENST00000421223 VCYO14598 125 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 PPP1R17O96001 155 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 CRYGDP07320 174 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 HSD52Q0P140 79 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 DEFB114Q30KQ6 69 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 ZFP2Q6ZN57 461 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 BAALCQ8WXS3 180 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 MAP6D1Q9H9H5 199 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 F8VRH5 84 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 CCL24O00175 119 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 PLA2G2AP14555 144 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 NSUN5P1Q3KNT7 163 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 RNF152Q8N8N0 203 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 C9orf85Q96MD7 179 aa8.06□□□□□ -1.12
DDX56-203ENST00000421223 H3BUT2 72 aa8.05□□□□□ -1.12
DDX56-203ENST00000421223 PDZD2O15018 2839 aa8.05□□□□□ -1.12
DDX56-203ENST00000421223 TRGV11A0A075B6L2 103 aa8.05□□□□□ -1.12
DDX56-203ENST00000421223 TRBV25-1A0A075B6N4 114 aa8.05□□□□□ -1.12
DDX56-203ENST00000421223 H3BRM9 83 aa8.05□□□□□ -1.12
DDX56-203ENST00000421223 HLA-DRB4P13762 266 aa8.05□□□□□ -1.12
DDX56-203ENST00000421223 RPL32P62910 135 aaKnown RBP8.05□□□□□ -1.12
DDX56-203ENST00000421223 Q8N2B8 174 aa8.05□□□□□ -1.12
DDX56-203ENST00000421223 Q9UF83 564 aa8.05□□□□□ -1.12
DDX56-203ENST00000421223 HLA-DRB4X5D2U9 266 aa8.05□□□□□ -1.12
DDX56-203ENST00000421223 CHAC1Q9BUX1 264 aa8.05□□□□□ -1.12
DDX56-203ENST00000421223 MRPL16Q9NX20 251 aaKnown RBP8.05□□□□□ -1.12
DDX56-203ENST00000421223 A6NDN8 102 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 C9orf118A6NHY6 69 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 OR11H12B2RN74 326 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 K7ERJ3 54 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 NXPH4O95158 308 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 PLNP26678 52 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 TMEM170BQ5T4T1 132 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 OR11H2Q8NH07 326 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 M0QY20 66 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 POLR2KP53803 58 aaKnown RBP8.04□□□□□ -1.12
DDX56-203ENST00000421223 STHQ8IWL8 128 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 NEXN-AS1Q8NBZ9 246 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 ODF3Q96PU9 254 aa8.04□□□□□ -1.12
DDX56-203ENST00000421223 IGHV3-64A0A075B6Q5 118 aa8.03□□□□□ -1.12
DDX56-203ENST00000421223 GAGE12BA1L429 117 aa8.03□□□□□ -1.12
DDX56-203ENST00000421223 FXYD2P54710 66 aa8.03□□□□□ -1.12
DDX56-203ENST00000421223 NHP2Q9NX24 153 aaKnown RBP8.03□□□□□ -1.12
DDX56-203ENST00000421223 IGHV3-38A0A0C4DH36 116 aa8.03□□□□□ -1.12
DDX56-203ENST00000421223 RNASE13Q5GAN3 156 aaKnown RBP8.03□□□□□ -1.12
DDX56-203ENST00000421223 UFSP1Q6NVU6 142 aa8.03□□□□□ -1.12
DDX56-203ENST00000421223 MORN3Q6PF18 240 aaPredicted RBP8.03□□□□□ -1.12
DDX56-203ENST00000421223 HIST1H4GQ99525 98 aa8.03□□□□□ -1.12
DDX56-203ENST00000421223 SCGB1A1P11684 91 aa8.03□□□□□ -1.12
DDX56-203ENST00000421223 SCGB1D4Q6XE38 83 aa8.03□□□□□ -1.12
DDX56-203ENST00000421223 LINC01006Q8NI28 216 aa8.03□□□□□ -1.12
DDX56-203ENST00000421223 PHLDA1Q8WV24 401 aaPredicted RBP8.03□□□□□ -1.12
DDX56-203ENST00000421223 WFDC10AQ9H1F0 79 aa8.03□□□□□ -1.12
DDX56-203ENST00000421223 HIGD1BQ9P298 99 aa8.03□□□□□ -1.12
DDX56-203ENST00000421223 IGHV3-53P01767 116 aa8.02□□□□□ -1.13
DDX56-203ENST00000421223 SPAG8Q99932 426 aaPredicted RBP8.02□□□□□ -1.13
DDX56-203ENST00000421223 TSHBP01222 138 aa8.02□□□□□ -1.13
DDX56-203ENST00000421223 CEMP1Q6PRD7 247 aaPredicted RBP8.02□□□□□ -1.13
DDX56-203ENST00000421223 TRPT1Q86TN4 253 aaKnown RBP8.02□□□□□ -1.13
DDX56-203ENST00000421223 PRADC1Q9BSG0 188 aa8.02□□□□□ -1.13
DDX56-203ENST00000421223 KMT2BQ9UMN6 2715 aaPredicted RBP8.01□□□□□ -1.13
DDX56-203ENST00000421223 C11orf86A6NJI1 115 aa8.01□□□□□ -1.13
DDX56-203ENST00000421223 RPL35AP18077 110 aaKnown RBP8.01□□□□□ -1.13
DDX56-203ENST00000421223 ODF3L2Q3SX64 289 aa8.01□□□□□ -1.13
DDX56-203ENST00000421223 C5orf47Q569G3 176 aa8.01□□□□□ -1.13
DDX56-203ENST00000421223 GAGE10A6NGK3 116 aa8□□□□□ -1.13
DDX56-203ENST00000421223 ZNF815PA8K554 130 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 216 ms