RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 RPL35P42766 123 aaKnown RBP6.07□□□□□ -1.44
LINC01238-201ENST00000416204 GNG4P50150 75 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
LINC01238-201ENST00000416204 SUMO1P63165 101 aaKnown RBP6.07□□□□□ -1.44
LINC01238-201ENST00000416204 GAGE1Q13065 139 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 GAGE4Q13068 117 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 GAGE5Q13069 117 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 PDE6HQ13956 83 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 GAGE13Q4V321 117 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 OR10G8Q8NGN5 311 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 ATP6V0E2Q8NHE4 81 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 OCC1Q8TAD7 63 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 FXYD5Q96DB9 178 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 PRADC1Q9BSG0 188 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 RPH3ALQ9UNE2 315 aa6.07□□□□□ -1.44
LINC01238-201ENST00000416204 TRBV20OR9-2A0A075B6H5 130 aa6.06□□□□□ -1.44
LINC01238-201ENST00000416204 GCGP01275 180 aa6.06□□□□□ -1.44
LINC01238-201ENST00000416204 TRGC2P03986 189 aa6.06□□□□□ -1.44
LINC01238-201ENST00000416204 NBEAP1P0C6P0 100 aa6.06□□□□□ -1.44
LINC01238-201ENST00000416204 RANP62826 216 aaKnown RBP6.06□□□□□ -1.44
LINC01238-201ENST00000416204 RHOHQ15669 191 aa6.06□□□□□ -1.44
LINC01238-201ENST00000416204 COX19Q49B96 90 aa6.06□□□□□ -1.44
LINC01238-201ENST00000416204 CFAP126Q5VTH2 177 aa6.06□□□□□ -1.44
LINC01238-201ENST00000416204 Q8N976 141 aa6.06□□□□□ -1.44
LINC01238-201ENST00000416204 DERL1Q9BUN8 251 aa6.06□□□□□ -1.44
LINC01238-201ENST00000416204 OSTCQ9NRP0 149 aa6.06□□□□□ -1.44
LINC01238-201ENST00000416204 Q9UF83 564 aa6.06□□□□□ -1.44
LINC01238-201ENST00000416204 GGTLC3B5MD39 225 aa6.05□□□□□ -1.44
LINC01238-201ENST00000416204 PANO1I0J062 215 aa6.05□□□□□ -1.44
LINC01238-201ENST00000416204 FABP9Q0Z7S8 132 aa6.05□□□□□ -1.44
LINC01238-201ENST00000416204 ZNF876PQ49A33 203 aa6.05□□□□□ -1.44
LINC01238-201ENST00000416204 Q6AWC8 147 aa6.05□□□□□ -1.44
LINC01238-201ENST00000416204 LINC00518Q8N0U6 118 aa6.05□□□□□ -1.44
LINC01238-201ENST00000416204 IL36BQ9NZH7 164 aa6.05□□□□□ -1.44
LINC01238-201ENST00000416204 KLK12Q9UKR0 248 aa6.05□□□□□ -1.44
LINC01238-201ENST00000416204 LPAP08519 4548 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 PEX7O00628 323 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 PHOX2AO14813 284 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 HIST1H2BKO60814 126 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 HIST1H2BJP06899 126 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 TRGC1P0CF51 173 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 HIST1H2BOP23527 126 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 HIST1H2BBP33778 126 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 CSN1S1P47710 185 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 AKR1D1P51857 326 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 HIST1H2BDP58876 126 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 HIST1H2BCP62807 126 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 HIST2H2BEQ16778 126 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 TDRG1Q3Y452 100 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 CENPWQ5EE01 88 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.04□□□□□ -1.44
LINC01238-201ENST00000416204 FAM231DQ6ZW35 169 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 ARL6IP6Q8N6S5 226 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 C5orf17Q8NAS9 161 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 HIST1H2BHQ93079 126 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 UBE2WQ96B02 151 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 HIST1H2BNQ99877 126 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 HIST1H2BMQ99879 126 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 OTORQ9NRC9 128 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 EPDR1Q9UM22 224 aa6.04□□□□□ -1.44
LINC01238-201ENST00000416204 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.04□□□□□ -1.44
LINC01238-201ENST00000416204 TRAV8-1A0A0A6YYK1 113 aa6.03□□□□□ -1.44
LINC01238-201ENST00000416204 TRBV6-1A0A0K0K1D8 114 aa6.03□□□□□ -1.44
LINC01238-201ENST00000416204 TRBV6-4A0A1B0GX49 114 aa6.03□□□□□ -1.44
LINC01238-201ENST00000416204 PGPA6NDG6 321 aa6.03□□□□□ -1.44
LINC01238-201ENST00000416204 K7EN84 100 aa6.03□□□□□ -1.44
LINC01238-201ENST00000416204 GAS8-AS1O95177 125 aa6.03□□□□□ -1.44
LINC01238-201ENST00000416204 SMIM6P0DI80 62 aa6.03□□□□□ -1.44
LINC01238-201ENST00000416204 NDUFA6P56556 154 aa6.03□□□□□ -1.44
LINC01238-201ENST00000416204 FMC1Q96HJ9 113 aa6.03□□□□□ -1.44
LINC01238-201ENST00000416204 SGK494Q96LW2 274 aa6.03□□□□□ -1.44
LINC01238-201ENST00000416204 SAMD10Q9BYL1 202 aa6.03□□□□□ -1.44
LINC01238-201ENST00000416204 TRBV7-9A0A0J9YWB2 115 aa6.02□□□□□ -1.45
LINC01238-201ENST00000416204 PGPEP1LA6NFU8 196 aa6.02□□□□□ -1.45
LINC01238-201ENST00000416204 DIRC3C9JPN6 131 aa6.02□□□□□ -1.45
LINC01238-201ENST00000416204 UBE2G1P62253 170 aa6.02□□□□□ -1.45
LINC01238-201ENST00000416204 COA6Q5JTJ3 125 aaKnown RBP6.02□□□□□ -1.45
LINC01238-201ENST00000416204 BAGE2Q86Y30 109 aa6.02□□□□□ -1.45
LINC01238-201ENST00000416204 TMEM75Q8N9X5 138 aa6.02□□□□□ -1.45
LINC01238-201ENST00000416204 RMI2Q96E14 147 aa6.02□□□□□ -1.45
LINC01238-201ENST00000416204 V9GYV3 84 aa6.02□□□□□ -1.45
LINC01238-201ENST00000416204 TRAV21A0A0B4J279 112 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 SERTM2A0A1B0GWG4 89 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 RBAKDNA6NC62 111 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 K7EQM0 130 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 MT-ND6P03923 174 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 S100A2P29034 98 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 WDR73Q6P4I2 378 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 RASL11AQ6T310 242 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 GOLT1AQ6ZVE7 132 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 C14orf178Q8N769 122 aaPredicted RBP6.01□□□□□ -1.45
LINC01238-201ENST00000416204 CMTM2Q8TAZ6 248 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 C11orf21Q9P2W6 132 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 TRAPPC1Q9Y5R8 145 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 COX11Q9Y6N1 276 aa6.01□□□□□ -1.45
LINC01238-201ENST00000416204 SMIM27A0A1W2PRY6 76 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 GATCO43716 136 aaKnown RBP6□□□□□ -1.45
LINC01238-201ENST00000416204 LTAP01374 205 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 TCRAP04437 139 aa6□□□□□ -1.45
LINC01238-201ENST00000416204 LINC00694P0DN24 101 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms