RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 JMJD8Q96S16 334 aa14.68□□□□□ -0.06
USP39-204ENST00000409766 LINC01587Q99440 93 aa14.68□□□□□ -0.06
USP39-204ENST00000409766 TMEM208Q9BTX3 173 aa14.68□□□□□ -0.06
USP39-204ENST00000409766 LINC01549A6NIU2 74 aa14.68□□□□□ -0.06
USP39-204ENST00000409766 OR11H12B2RN74 326 aa14.68□□□□□ -0.06
USP39-204ENST00000409766 SIVA1O15304 175 aa14.68□□□□□ -0.06
USP39-204ENST00000409766 LY6G6DO95868 133 aa14.68□□□□□ -0.06
USP39-204ENST00000409766 GTSCR1Q86UQ5 136 aa14.68□□□□□ -0.06
USP39-204ENST00000409766 STHQ8IWL8 128 aa14.68□□□□□ -0.06
USP39-204ENST00000409766 DEFB104AQ8WTQ1 72 aa14.68□□□□□ -0.06
USP39-204ENST00000409766 PTH2Q96A98 100 aa14.68□□□□□ -0.06
USP39-204ENST00000409766 SETXQ7Z333 2677 aaKnown RBP14.67□□□□□ -0.06
USP39-204ENST00000409766 C11orf72Q8NBR9 251 aa14.67□□□□□ -0.06
USP39-204ENST00000409766 TP53TG1Q9Y2A0 90 aa14.67□□□□□ -0.06
USP39-204ENST00000409766 RIPPLY3P57055 190 aa14.66□□□□□ -0.06
USP39-204ENST00000409766 EDA2RQ9HAV5 297 aa14.66□□□□□ -0.06
USP39-204ENST00000409766 CHTOPQ9Y3Y2 248 aaKnown RBP14.66□□□□□ -0.06
USP39-204ENST00000409766 IGIPA6NJ69 53 aa14.66□□□□□ -0.06
USP39-204ENST00000409766 UFSP1Q6NVU6 142 aa14.66□□□□□ -0.06
USP39-204ENST00000409766 A8MWV9 139 aa14.65□□□□□ -0.06
USP39-204ENST00000409766 SAP30O75446 220 aa14.65□□□□□ -0.06
USP39-204ENST00000409766 XCL2Q9UBD3 114 aa14.65□□□□□ -0.06
USP39-204ENST00000409766 NACAE9PAV3 2078 aa14.65□□□□□ -0.06
USP39-204ENST00000409766 TSHBP01222 138 aa14.65□□□□□ -0.06
USP39-204ENST00000409766 PRSS29PA6NIE9 313 aa14.64□□□□□ -0.07
USP39-204ENST00000409766 RPL39P62891 51 aaKnown RBP14.64□□□□□ -0.07
USP39-204ENST00000409766 NSUN5P1Q3KNT7 163 aa14.63□□□□□ -0.07
USP39-204ENST00000409766 TMEM97Q5BJF2 176 aa14.63□□□□□ -0.07
USP39-204ENST00000409766 Q6ZVH6 145 aa14.63□□□□□ -0.07
USP39-204ENST00000409766 IGLV1-51P01701 117 aa14.63□□□□□ -0.07
USP39-204ENST00000409766 GAGE1Q13065 139 aa14.63□□□□□ -0.07
USP39-204ENST00000409766 SPXQ9BT56 116 aa14.63□□□□□ -0.07
USP39-204ENST00000409766 TTTY13Q9BZ97 58 aa14.63□□□□□ -0.07
USP39-204ENST00000409766 COX11Q9Y6N1 276 aa14.63□□□□□ -0.07
USP39-204ENST00000409766 IGHV3-73A0A0B4J1V6 119 aa14.62□□□□□ -0.07
USP39-204ENST00000409766 C1orf158Q8N1D5 194 aa14.62□□□□□ -0.07
USP39-204ENST00000409766 TIMM17AQ99595 171 aa14.62□□□□□ -0.07
USP39-204ENST00000409766 RHOHQ15669 191 aa14.61□□□□□ -0.07
USP39-204ENST00000409766 TMEM141Q96I45 108 aa14.61□□□□□ -0.07
USP39-204ENST00000409766 I3L3M4 83 aa14.61□□□□□ -0.07
USP39-204ENST00000409766 CMC4P56277 68 aaPredicted RBP14.61□□□□□ -0.07
USP39-204ENST00000409766 BEAN1Q3B7T3 259 aa14.61□□□□□ -0.07
USP39-204ENST00000409766 CFAP126Q5VTH2 177 aa14.61□□□□□ -0.07
USP39-204ENST00000409766 ORAOV1Q8WV07 137 aa14.61□□□□□ -0.07
USP39-204ENST00000409766 AZU1P20160 251 aa14.6□□□□□ -0.07
USP39-204ENST00000409766 P0DMU3 169 aa14.59□□□□□ -0.07
USP39-204ENST00000409766 FAM231AP0DMU4 169 aa14.59□□□□□ -0.07
USP39-204ENST00000409766 FAM231CP0DMU5 169 aa14.59□□□□□ -0.07
USP39-204ENST00000409766 KRTAP10-3P60369 221 aa14.59□□□□□ -0.07
USP39-204ENST00000409766 HSD52Q0P140 79 aa14.59□□□□□ -0.07
USP39-204ENST00000409766 TAX1BP3O14907 124 aa14.59□□□□□ -0.07
USP39-204ENST00000409766 FAM110AQ9BQ89 295 aa14.59□□□□□ -0.07
USP39-204ENST00000409766 MRPL16Q9NX20 251 aaKnown RBP14.59□□□□□ -0.07
USP39-204ENST00000409766 PMVKQ15126 192 aa14.58□□□□□ -0.08
USP39-204ENST00000409766 Q6ZSN1 163 aa14.58□□□□□ -0.08
USP39-204ENST00000409766 HIGD1BQ9P298 99 aa14.58□□□□□ -0.08
USP39-204ENST00000409766 SEC11AP67812 179 aa14.58□□□□□ -0.08
USP39-204ENST00000409766 C19orf73Q9NVV2 129 aa14.58□□□□□ -0.08
USP39-204ENST00000409766 TRBV25-1A0A075B6N4 114 aa14.57□□□□□ -0.08
USP39-204ENST00000409766 NDUFA11Q86Y39 141 aa14.57□□□□□ -0.08
USP39-204ENST00000409766 C20orf203Q8NBC4 194 aa14.57□□□□□ -0.08
USP39-204ENST00000409766 CST9LQ9H4G1 147 aa14.57□□□□□ -0.08
USP39-204ENST00000409766 JMJD1CQ15652 2540 aa14.56□□□□□ -0.08
USP39-204ENST00000409766 IGLV4-69A0A075B6H9 119 aa14.56□□□□□ -0.08
USP39-204ENST00000409766 IGHV3OR16-12A0A075B7B8 117 aa14.56□□□□□ -0.08
USP39-204ENST00000409766 RHODO00212 210 aa14.56□□□□□ -0.08
USP39-204ENST00000409766 NPSP0C0P6 89 aa14.56□□□□□ -0.08
USP39-204ENST00000409766 MAPKAPK5-AS1Q8N8E1 139 aa14.56□□□□□ -0.08
USP39-204ENST00000409766 IL17DQ8TAD2 202 aa14.56□□□□□ -0.08
USP39-204ENST00000409766 TRAV8-6A0A0B4J262 113 aa14.56□□□□□ -0.08
USP39-204ENST00000409766 RS1O15537 224 aa14.55□□□□□ -0.08
USP39-204ENST00000409766 GIG44P09565 113 aaPredicted RBP14.55□□□□□ -0.08
USP39-204ENST00000409766 WFDC10AQ9H1F0 79 aa14.55□□□□□ -0.08
USP39-204ENST00000409766 Q9UF83 564 aa14.55□□□□□ -0.08
USP39-204ENST00000409766 INAFM1C9JVW0 142 aa14.54□□□□□ -0.08
USP39-204ENST00000409766 RNASE8Q8TDE3 154 aaKnown RBP14.54□□□□□ -0.08
USP39-204ENST00000409766 TNFRSF18Q9Y5U5 241 aa14.54□□□□□ -0.08
USP39-204ENST00000409766 NSD1Q96L73 2696 aaPredicted RBP14.54□□□□□ -0.08
USP39-204ENST00000409766 IGHV3-53P01767 116 aa14.54□□□□□ -0.08
USP39-204ENST00000409766 C11orf86A6NJI1 115 aa14.53□□□□□ -0.08
USP39-204ENST00000409766 CHAC1Q9BUX1 264 aa14.53□□□□□ -0.08
USP39-204ENST00000409766 E9PLD3 99 aa14.53□□□□□ -0.08
USP39-204ENST00000409766 PAPPA-AS1Q5QFB9 102 aa14.53□□□□□ -0.08
USP39-204ENST00000409766 OR11H2Q8NH07 326 aa14.52□□□□□ -0.09
USP39-204ENST00000409766 FOSL1P15407 271 aa14.51□□□□□ -0.09
USP39-204ENST00000409766 TMEM263Q8WUH6 116 aaKnown RBP14.51□□□□□ -0.09
USP39-204ENST00000409766 OPRPNQ99935 248 aaPredicted RBP14.51□□□□□ -0.09
USP39-204ENST00000409766 HIVEP1P15822 2718 aa14.51□□□□□ -0.09
USP39-204ENST00000409766 EMP1P54849 157 aa14.51□□□□□ -0.09
USP39-204ENST00000409766 A6NDN8 102 aa14.5□□□□□ -0.09
USP39-204ENST00000409766 PRADC1Q9BSG0 188 aa14.5□□□□□ -0.09
USP39-204ENST00000409766 LINC00482Q8N8I6 264 aa14.49□□□□□ -0.09
USP39-204ENST00000409766 DNAJC30Q96LL9 226 aa14.49□□□□□ -0.09
USP39-204ENST00000409766 TRGV1A0A0A0MS02 117 aa14.49□□□□□ -0.09
USP39-204ENST00000409766 PF4P02776 101 aa14.49□□□□□ -0.09
USP39-204ENST00000409766 ZNRF2Q8NHG8 242 aa14.49□□□□□ -0.09
USP39-204ENST00000409766 MYMXA0A1B0GTQ4 84 aa14.48□□□□□ -0.09
USP39-204ENST00000409766 RPL35AP18077 110 aaKnown RBP14.48□□□□□ -0.09
USP39-204ENST00000409766 C2CD3Q4AC94 2353 aa14.48□□□□□ -0.09
USP39-204ENST00000409766 IGLV4-3A0A075B6K6 122 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms