RNA–Protein interactions for RNA: ENST00000407082.3

SMARCB1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 5 BASIC

Gene SMARCB1, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-203ENST00000407082 MCRIP2Q9BUT9 160 aaKnown RBP9.52□□□□□ -0.89
SMARCB1-203ENST00000407082 COX11Q9Y6N1 276 aa9.52□□□□□ -0.89
SMARCB1-203ENST00000407082 TRAV26-2A0A0B4J265 109 aa9.51□□□□□ -0.89
SMARCB1-203ENST00000407082 IGHV3-16A0A0C4DH30 117 aa9.51□□□□□ -0.89
SMARCB1-203ENST00000407082 HSD52Q0P140 79 aa9.51□□□□□ -0.89
SMARCB1-203ENST00000407082 MPV17L2Q567V2 206 aa9.51□□□□□ -0.89
SMARCB1-203ENST00000407082 PIK3CD-AS1Q5SR53 167 aa9.51□□□□□ -0.89
SMARCB1-203ENST00000407082 CASC10Q5T4H9 136 aa9.51□□□□□ -0.89
SMARCB1-203ENST00000407082 Q6ZQT7 251 aa9.51□□□□□ -0.89
SMARCB1-203ENST00000407082 LINC00482Q8N8I6 264 aa9.51□□□□□ -0.89
SMARCB1-203ENST00000407082 DLX4Q92988 240 aaPredicted RBP9.51□□□□□ -0.89
SMARCB1-203ENST00000407082 HIGD1BQ9P298 99 aa9.51□□□□□ -0.89
SMARCB1-203ENST00000407082 TRBV6-5A0A0K0K1A5 114 aa9.5□□□□□ -0.89
SMARCB1-203ENST00000407082 A8MTW9 85 aa9.5□□□□□ -0.89
SMARCB1-203ENST00000407082 F5H697 171 aa9.5□□□□□ -0.89
SMARCB1-203ENST00000407082 GAS8-AS1O95177 125 aa9.5□□□□□ -0.89
SMARCB1-203ENST00000407082 DEFB1P60022 68 aa9.5□□□□□ -0.89
SMARCB1-203ENST00000407082 ANKRD39Q53RE8 183 aa9.5□□□□□ -0.89
SMARCB1-203ENST00000407082 DKK2Q9UBU2 259 aa9.5□□□□□ -0.89
SMARCB1-203ENST00000407082 CYSLTR1Q9Y271 337 aa9.5□□□□□ -0.89
SMARCB1-203ENST00000407082 KIF25-AS1Q9Y6Z4 181 aa9.5□□□□□ -0.89
SMARCB1-203ENST00000407082 F8VRH5 84 aa9.49□□□□□ -0.89
SMARCB1-203ENST00000407082 EGFEM1PQ0D2K5 195 aa9.49□□□□□ -0.89
SMARCB1-203ENST00000407082 ERASQ7Z444 233 aa9.49□□□□□ -0.89
SMARCB1-203ENST00000407082 TRPT1Q86TN4 253 aaKnown RBP9.49□□□□□ -0.89
SMARCB1-203ENST00000407082 MUC7Q8TAX7 377 aa9.49□□□□□ -0.89
SMARCB1-203ENST00000407082 PTH2Q96A98 100 aa9.49□□□□□ -0.89
SMARCB1-203ENST00000407082 TMEM141Q96I45 108 aa9.49□□□□□ -0.89
SMARCB1-203ENST00000407082 CLUHP3Q96NS8 147 aa9.49□□□□□ -0.89
SMARCB1-203ENST00000407082 CSTL1Q9H114 145 aa9.49□□□□□ -0.89
SMARCB1-203ENST00000407082 DNAH9Q9NYC9 4486 aa9.48□□□□□ -0.89
SMARCB1-203ENST00000407082 RYR2Q92736 4967 aa9.48□□□□□ -0.89
SMARCB1-203ENST00000407082 FGF6P10767 208 aa9.48□□□□□ -0.89
SMARCB1-203ENST00000407082 EDN2P20800 178 aa9.48□□□□□ -0.89
SMARCB1-203ENST00000407082 NMUP48645 174 aa9.48□□□□□ -0.89
SMARCB1-203ENST00000407082 C2orf66Q6UXQ4 117 aa9.48□□□□□ -0.89
SMARCB1-203ENST00000407082 SPAG8Q99932 426 aaPredicted RBP9.48□□□□□ -0.89
SMARCB1-203ENST00000407082 LINC00467Q9BRT7 94 aa9.48□□□□□ -0.89
SMARCB1-203ENST00000407082 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
SMARCB1-203ENST00000407082 STAB2Q8WWQ8 2551 aa9.47□□□□□ -0.89
SMARCB1-203ENST00000407082 CBY3A6NI87 242 aa9.47□□□□□ -0.89
SMARCB1-203ENST00000407082 POLR2KP53803 58 aaKnown RBP9.47□□□□□ -0.89
SMARCB1-203ENST00000407082 DEFB131AP59861 70 aa9.47□□□□□ -0.89
SMARCB1-203ENST00000407082 RHOHQ15669 191 aa9.47□□□□□ -0.89
SMARCB1-203ENST00000407082 SPINK13Q1W4C9 94 aa9.47□□□□□ -0.89
SMARCB1-203ENST00000407082 C2orf91Q6ZV80 131 aa9.47□□□□□ -0.89
SMARCB1-203ENST00000407082 LCE6AA0A183 80 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 IGKV3-20P01619 116 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 PTTG1IPP53801 180 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 LINC00315P59091 139 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 ZNF415Q09FC8 603 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 UBE2V1Q13404 147 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 TAL2Q16559 108 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 ZC2HC1BQ5TFG8 222 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 SUMO4Q6EEV6 95 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 AMTNQ6UX39 209 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 Q8N1Y9 231 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 RPL39LQ96EH5 51 aaKnown RBP9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 EDA2RQ9HAV5 297 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 HHLA3Q9XRX5 114 aa9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 ZNF256Q9Y2P7 627 aaPredicted RBP9.46□□□□□ -0.9
SMARCB1-203ENST00000407082 TRBV27A0A0K0K1C4 114 aa9.45□□□□□ -0.9
SMARCB1-203ENST00000407082 A8MWV9 139 aa9.45□□□□□ -0.9
SMARCB1-203ENST00000407082 H3BMM0 161 aa9.45□□□□□ -0.9
SMARCB1-203ENST00000407082 HERVK_113P61574 105 aa9.45□□□□□ -0.9
SMARCB1-203ENST00000407082 ZNF56Q15929 161 aa9.45□□□□□ -0.9
SMARCB1-203ENST00000407082 NEXN-AS1Q8NBZ9 246 aa9.45□□□□□ -0.9
SMARCB1-203ENST00000407082 TIMM17AQ99595 171 aa9.45□□□□□ -0.9
SMARCB1-203ENST00000407082 SPXQ9BT56 116 aa9.45□□□□□ -0.9
SMARCB1-203ENST00000407082 MRPL35Q9NZE8 188 aaKnown RBP9.45□□□□□ -0.9
SMARCB1-203ENST00000407082 TRAV12-2A0A075B6T6 113 aa9.44□□□□□ -0.9
SMARCB1-203ENST00000407082 H3BRM9 83 aa9.44□□□□□ -0.9
SMARCB1-203ENST00000407082 VAMP3Q15836 100 aa9.44□□□□□ -0.9
SMARCB1-203ENST00000407082 DEFB114Q30KQ6 69 aa9.44□□□□□ -0.9
SMARCB1-203ENST00000407082 SDHAF1A6NFY7 115 aa9.43□□□□□ -0.9
SMARCB1-203ENST00000407082 M0R2P5 195 aa9.43□□□□□ -0.9
SMARCB1-203ENST00000407082 SAP30O75446 220 aa9.43□□□□□ -0.9
SMARCB1-203ENST00000407082 ZNF876PQ49A33 203 aa9.43□□□□□ -0.9
SMARCB1-203ENST00000407082 C9orf66Q5T8R8 295 aa9.43□□□□□ -0.9
SMARCB1-203ENST00000407082 ZFAND6Q6FIF0 208 aa9.43□□□□□ -0.9
SMARCB1-203ENST00000407082 ADAMTSL5Q6ZMM2 481 aa9.43□□□□□ -0.9
SMARCB1-203ENST00000407082 ZFP2Q6ZN57 461 aa9.43□□□□□ -0.9
SMARCB1-203ENST00000407082 SELENOKQ9Y6D0 94 aa9.43□□□□□ -0.9
SMARCB1-203ENST00000407082 MUC4Q99102 2169 aa9.43□□□□□ -0.9
SMARCB1-203ENST00000407082 A0A087WWL8 130 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 OR11H12B2RN74 326 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 RHODO00212 210 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 TAX1BP3O14907 124 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 INSP01308 110 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 CRYGDP07320 174 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 INSL3P51460 131 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 PMVKQ15126 192 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 FAM74A4Q5TZK3 123 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 GTSCR1Q86UQ5 136 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 TMEM61Q8N0U2 210 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 OR11H2Q8NH07 326 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 BAALCQ8WXS3 180 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 MAP6D1Q9H9H5 199 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 MDFICQ9P1T7 246 aa9.42□□□□□ -0.9
SMARCB1-203ENST00000407082 KNCNA6PVL3 124 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms