RNA–Protein interactions for RNA: ENST00000406548.5

EWSR1-207, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EWSR1, Length 2,207 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-207ENST00000406548 TMEM223A0PJW6 202 aa13.62□□□□□ -0.23
EWSR1-207ENST00000406548 SMCPP49901 116 aaPredicted RBP13.62□□□□□ -0.23
EWSR1-207ENST00000406548 IGSF10Q6WRI0 2623 aa13.61□□□□□ -0.23
EWSR1-207ENST00000406548 CFAP46Q8IYW2 2715 aa13.61□□□□□ -0.23
EWSR1-207ENST00000406548 LEPROTO15243 131 aa13.61□□□□□ -0.23
EWSR1-207ENST00000406548 CFC1BP0CG36 223 aa13.61□□□□□ -0.23
EWSR1-207ENST00000406548 CFC1P0CG37 223 aa13.61□□□□□ -0.23
EWSR1-207ENST00000406548 LINC01356Q8N9X3 169 aa13.61□□□□□ -0.23
EWSR1-207ENST00000406548 ATP6V0E2Q8NHE4 81 aa13.61□□□□□ -0.23
EWSR1-207ENST00000406548 RNF152Q8N8N0 203 aa13.6□□□□□ -0.23
EWSR1-207ENST00000406548 NRGNQ92686 78 aa13.6□□□□□ -0.23
EWSR1-207ENST00000406548 DUX5Q96PT3 197 aa13.6□□□□□ -0.23
EWSR1-207ENST00000406548 C1QTNF4Q9BXJ3 329 aa13.6□□□□□ -0.23
EWSR1-207ENST00000406548 MAP1AP78559 2803 aaPredicted RBP13.6□□□□□ -0.23
EWSR1-207ENST00000406548 SCGB1A1P11684 91 aa13.6□□□□□ -0.23
EWSR1-207ENST00000406548 HOXD3P31249 432 aaPredicted RBP13.59□□□□□ -0.23
EWSR1-207ENST00000406548 ZNF22P17026 224 aaPredicted RBP13.59□□□□□ -0.23
EWSR1-207ENST00000406548 C10orf126Q8N4M7 172 aa13.59□□□□□ -0.23
EWSR1-207ENST00000406548 IGLV4-3A0A075B6K6 122 aa13.58□□□□□ -0.24
EWSR1-207ENST00000406548 ELANEP08246 267 aa13.58□□□□□ -0.24
EWSR1-207ENST00000406548 SMAGPQ0VAQ4 97 aa13.58□□□□□ -0.24
EWSR1-207ENST00000406548 RHODO00212 210 aa13.58□□□□□ -0.24
EWSR1-207ENST00000406548 RBMY1A1P0DJD3 496 aaKnown RBP13.58□□□□□ -0.24
EWSR1-207ENST00000406548 RBMY1CP0DJD4 496 aa13.58□□□□□ -0.24
EWSR1-207ENST00000406548 FOXI1Q12951 378 aa13.58□□□□□ -0.24
EWSR1-207ENST00000406548 RBMY1FQ15415 496 aaKnown RBP13.58□□□□□ -0.24
EWSR1-207ENST00000406548 BBC3Q96PG8 261 aaPredicted RBP13.58□□□□□ -0.24
EWSR1-207ENST00000406548 VPREB3Q9UKI3 123 aa13.58□□□□□ -0.24
EWSR1-207ENST00000406548 USP24Q9UPU5 2620 aa13.57□□□□□ -0.24
EWSR1-207ENST00000406548 DOPEY1Q5JWR5 2465 aa13.57□□□□□ -0.24
EWSR1-207ENST00000406548 J3QLI3 93 aa13.57□□□□□ -0.24
EWSR1-207ENST00000406548 TCL1BO95988 128 aa13.56□□□□□ -0.24
EWSR1-207ENST00000406548 PRB1P04280 392 aa13.56□□□□□ -0.24
EWSR1-207ENST00000406548 CRYBG3Q68DQ2 2970 aa13.56□□□□□ -0.24
EWSR1-207ENST00000406548 ZNF418Q8TF45 676 aaPredicted RBP13.56□□□□□ -0.24
EWSR1-207ENST00000406548 UBE2E2Q96LR5 201 aa13.56□□□□□ -0.24
EWSR1-207ENST00000406548 VCX2Q9H322 139 aa13.56□□□□□ -0.24
EWSR1-207ENST00000406548 EDA2RQ9HAV5 297 aa13.56□□□□□ -0.24
EWSR1-207ENST00000406548 PRO1854Q9UHT4 67 aa13.56□□□□□ -0.24
EWSR1-207ENST00000406548 DOPEY2Q9Y3R5 2298 aa13.56□□□□□ -0.24
EWSR1-207ENST00000406548 A0A0J9YXV3 536 aa13.56□□□□□ -0.24
EWSR1-207ENST00000406548 TRBV20-1A0A075B6N2 111 aa13.55□□□□□ -0.24
EWSR1-207ENST00000406548 IGHV3-64A0A075B6Q5 118 aa13.55□□□□□ -0.24
EWSR1-207ENST00000406548 A0A096LNT2 108 aa13.55□□□□□ -0.24
EWSR1-207ENST00000406548 ZNF702PQ9H963 129 aa13.55□□□□□ -0.24
EWSR1-207ENST00000406548 TCTEX1D4Q5JR98 221 aa13.55□□□□□ -0.24
EWSR1-207ENST00000406548 KNCNA6PVL3 124 aa13.54□□□□□ -0.24
EWSR1-207ENST00000406548 TGFAP01135 160 aa13.54□□□□□ -0.24
EWSR1-207ENST00000406548 A4D1N5 150 aa13.54□□□□□ -0.24
EWSR1-207ENST00000406548 IGHV3-73A0A0B4J1V6 119 aa13.53□□□□□ -0.24
EWSR1-207ENST00000406548 HTN1P15515 57 aa13.53□□□□□ -0.24
EWSR1-207ENST00000406548 PYGO1Q9Y3Y4 419 aa13.53□□□□□ -0.24
EWSR1-207ENST00000406548 TRAV2A0A0B4J234 112 aa13.52□□□□□ -0.24
EWSR1-207ENST00000406548 CD28P10747 220 aa13.52□□□□□ -0.24
EWSR1-207ENST00000406548 MAPK1IP1LQ8NDC0 245 aa13.52□□□□□ -0.24
EWSR1-207ENST00000406548 SORL1Q92673 2214 aa13.52□□□□□ -0.25
EWSR1-207ENST00000406548 DEFB131AP59861 70 aa13.52□□□□□ -0.25
EWSR1-207ENST00000406548 FLNCQ14315 2725 aa13.52□□□□□ -0.25
EWSR1-207ENST00000406548 PROK1P58294 105 aa13.51□□□□□ -0.25
EWSR1-207ENST00000406548 PTH2Q96A98 100 aa13.51□□□□□ -0.25
EWSR1-207ENST00000406548 USP9XQ93008 2570 aaPredicted RBP13.51□□□□□ -0.25
EWSR1-207ENST00000406548 EIF4EBP3O60516 100 aaPredicted RBP13.51□□□□□ -0.25
EWSR1-207ENST00000406548 SCGB1C2P0DMR2 95 aa13.51□□□□□ -0.25
EWSR1-207ENST00000406548 Q6YL49 198 aa13.51□□□□□ -0.25
EWSR1-207ENST00000406548 TEN1Q86WV5 123 aa13.51□□□□□ -0.25
EWSR1-207ENST00000406548 SBSPONQ8IVN8 264 aa13.51□□□□□ -0.25
EWSR1-207ENST00000406548 FAM104AQ969W3 186 aa13.51□□□□□ -0.25
EWSR1-207ENST00000406548 A0A0B4J2C4 111 aa13.5□□□□□ -0.25
EWSR1-207ENST00000406548 A8MTW9 85 aa13.5□□□□□ -0.25
EWSR1-207ENST00000406548 SLURP1P55000 103 aa13.5□□□□□ -0.25
EWSR1-207ENST00000406548 ZNF843Q8N446 348 aa13.5□□□□□ -0.25
EWSR1-207ENST00000406548 TMEM263Q8WUH6 116 aaKnown RBP13.5□□□□□ -0.25
EWSR1-207ENST00000406548 Q5PR19 223 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 MUSTN1Q8IVN3 82 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 PPDPFLQ8WWR9 84 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 DUX3Q96PT4 197 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 TNFRSF18Q9Y5U5 241 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 RBMY1BA6NDE4 496 aaKnown RBP13.49□□□□□ -0.25
EWSR1-207ENST00000406548 RBMY1EA6NEQ0 496 aaKnown RBP13.49□□□□□ -0.25
EWSR1-207ENST00000406548 A8MWV9 139 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 H3BMM0 161 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 M0R2P5 195 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 FSHBP01225 129 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 IGHV3-33P01772 117 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 RBMY1DP0C7P1 496 aaKnown RBP13.49□□□□□ -0.25
EWSR1-207ENST00000406548 CRYBA4P53673 196 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 MRPS36P82909 103 aaKnown RBP13.49□□□□□ -0.25
EWSR1-207ENST00000406548 DEFB136Q30KP8 78 aa13.49□□□□□ -0.25
EWSR1-207ENST00000406548 A0A0J9YXY3 114 aa13.48□□□□□ -0.25
EWSR1-207ENST00000406548 IGHV3-30-3P0DP02 117 aa13.48□□□□□ -0.25
EWSR1-207ENST00000406548 C18orf65Q6ZTR6 163 aa13.48□□□□□ -0.25
EWSR1-207ENST00000406548 RAX2Q96IS3 184 aa13.48□□□□□ -0.25
EWSR1-207ENST00000406548 TIMM21Q9BVV7 248 aa13.48□□□□□ -0.25
EWSR1-207ENST00000406548 SPXQ9BT56 116 aa13.48□□□□□ -0.25
EWSR1-207ENST00000406548 CSMD2Q7Z408 3487 aa13.47□□□□□ -0.25
EWSR1-207ENST00000406548 ZNF415Q09FC8 603 aa13.47□□□□□ -0.25
EWSR1-207ENST00000406548 CEMP1Q6PRD7 247 aaPredicted RBP13.47□□□□□ -0.25
EWSR1-207ENST00000406548 CARD19Q96LW7 228 aa13.47□□□□□ -0.25
EWSR1-207ENST00000406548 CDIP1Q9H305 208 aa13.47□□□□□ -0.25
EWSR1-207ENST00000406548 BEX4Q9NWD9 120 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms