RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 CMC4P56277 68 aaPredicted RBP7.58□□□□□ -1.2
PTPRM-203ENST00000400060 Q6ZS46 218 aa7.58□□□□□ -1.2
PTPRM-203ENST00000400060 COL5A1P20908 1838 aaPredicted RBP7.57□□□□□ -1.2
PTPRM-203ENST00000400060 TRBV27A0A0K0K1C4 114 aa7.57□□□□□ -1.2
PTPRM-203ENST00000400060 E7EUB6 86 aa7.57□□□□□ -1.2
PTPRM-203ENST00000400060 LECT2O14960 151 aa7.57□□□□□ -1.2
PTPRM-203ENST00000400060 ZNF318Q5VUA4 2279 aa7.57□□□□□ -1.2
PTPRM-203ENST00000400060 LTBP2Q14767 1821 aa7.57□□□□□ -1.2
PTPRM-203ENST00000400060 GNRH2O43555 120 aa7.57□□□□□ -1.2
PTPRM-203ENST00000400060 CTSGP08311 255 aa7.57□□□□□ -1.2
PTPRM-203ENST00000400060 ZNF672Q499Z4 452 aaPredicted RBP7.57□□□□□ -1.2
PTPRM-203ENST00000400060 PSMG3-AS1Q96PY0 264 aa7.57□□□□□ -1.2
PTPRM-203ENST00000400060 FER1L5A0AVI2 2057 aa7.57□□□□□ -1.2
PTPRM-203ENST00000400060 INSP01308 110 aa7.57□□□□□ -1.2
PTPRM-203ENST00000400060 OPRPNQ99935 248 aaPredicted RBP7.57□□□□□ -1.2
PTPRM-203ENST00000400060 ARHGAP21Q5T5U3 1957 aa7.56□□□□□ -1.2
PTPRM-203ENST00000400060 CACNA1HO95180 2353 aa7.56□□□□□ -1.2
PTPRM-203ENST00000400060 LY6EQ16553 131 aa7.56□□□□□ -1.2
PTPRM-203ENST00000400060 C9orf85Q96MD7 179 aa7.56□□□□□ -1.2
PTPRM-203ENST00000400060 KLK5Q9Y337 293 aaPredicted RBP7.56□□□□□ -1.2
PTPRM-203ENST00000400060 LYNX1G3V0Z9 82 aa7.56□□□□□ -1.2
PTPRM-203ENST00000400060 ELANEP08246 267 aa7.56□□□□□ -1.2
PTPRM-203ENST00000400060 LYNX1P0DP58 116 aa7.56□□□□□ -1.2
PTPRM-203ENST00000400060 PRAC2D3DTV9 90 aa7.56□□□□□ -1.2
PTPRM-203ENST00000400060 IGF2-ASQ6U949 168 aa7.56□□□□□ -1.2
PTPRM-203ENST00000400060 IGLV4-69A0A075B6H9 119 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 COX6B1P14854 86 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 COX7B2Q8TF08 81 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 DKK4Q9UBT3 224 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 MYO7BQ6PIF6 2116 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 FSTL3O95633 263 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 DEFB104AQ8WTQ1 72 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 IGLV4-3A0A075B6K6 122 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 IGIPA6NJ69 53 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 IGFL3Q6UXB1 125 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 PKDREJQ9NTG1 2253 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 DIDO1Q9BTC0 2240 aaKnown RBP7.55□□□□□ -1.2
PTPRM-203ENST00000400060 IGHV7-4-1A0A0J9YVY3 117 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 ENHOQ6UWT2 76 aa7.55□□□□□ -1.2
PTPRM-203ENST00000400060 IGHV3-73A0A0B4J1V6 119 aa7.54□□□□□ -1.2
PTPRM-203ENST00000400060 RPL35AP18077 110 aaKnown RBP7.54□□□□□ -1.2
PTPRM-203ENST00000400060 XCL1P47992 114 aa7.54□□□□□ -1.2
PTPRM-203ENST00000400060 PLA2G2CQ5R387 149 aa7.54□□□□□ -1.2
PTPRM-203ENST00000400060 XCL2Q9UBD3 114 aa7.54□□□□□ -1.2
PTPRM-203ENST00000400060 EML6Q6ZMW3 1958 aa7.54□□□□□ -1.2
PTPRM-203ENST00000400060 EP400Q96L91 3159 aa7.54□□□□□ -1.2
PTPRM-203ENST00000400060 CCKP06307 115 aa7.54□□□□□ -1.2
PTPRM-203ENST00000400060 CCL19Q99731 98 aa7.54□□□□□ -1.2
PTPRM-203ENST00000400060 CACNA1GO43497 2377 aa7.54□□□□□ -1.2
PTPRM-203ENST00000400060 ATP6V0E1O15342 81 aa7.54□□□□□ -1.2
PTPRM-203ENST00000400060 COL4A2P08572 1712 aa7.54□□□□□ -1.2
PTPRM-203ENST00000400060 CRYGDP07320 174 aa7.53□□□□□ -1.2
PTPRM-203ENST00000400060 PRB3Q04118 309 aaPredicted RBP7.53□□□□□ -1.2
PTPRM-203ENST00000400060 Q9HAA7 133 aa7.53□□□□□ -1.2
PTPRM-203ENST00000400060 AKAP6Q13023 2319 aa7.53□□□□□ -1.2
PTPRM-203ENST00000400060 HOXD3P31249 432 aaPredicted RBP7.53□□□□□ -1.2
PTPRM-203ENST00000400060 MPLKIPQ8TAP9 179 aa7.53□□□□□ -1.2
PTPRM-203ENST00000400060 WNK2Q9Y3S1 2297 aa7.53□□□□□ -1.2
PTPRM-203ENST00000400060 POLR2KP53803 58 aaKnown RBP7.53□□□□□ -1.2
PTPRM-203ENST00000400060 PIK3CD-AS1Q5SR53 167 aa7.53□□□□□ -1.2
PTPRM-203ENST00000400060 C4orf26Q17RF5 130 aa7.53□□□□□ -1.2
PTPRM-203ENST00000400060 TRGV2A0A075B6R0 118 aa7.52□□□□□ -1.21
PTPRM-203ENST00000400060 IGHV3OR16-10A0A075B7F0 116 aa7.52□□□□□ -1.21
PTPRM-203ENST00000400060 SPRY2O43597 315 aa7.52□□□□□ -1.21
PTPRM-203ENST00000400060 C1orf229Q6ZS94 237 aaPredicted RBP7.52□□□□□ -1.21
PTPRM-203ENST00000400060 PMAIP1Q13794 54 aa7.52□□□□□ -1.21
PTPRM-203ENST00000400060 IGHV3-11P01762 117 aa7.52□□□□□ -1.21
PTPRM-203ENST00000400060 LINC01600Q96MT4 127 aa7.52□□□□□ -1.21
PTPRM-203ENST00000400060 POLEQ07864 2286 aa7.52□□□□□ -1.21
PTPRM-203ENST00000400060 F8WEM9 126 aa7.51□□□□□ -1.21
PTPRM-203ENST00000400060 PIP4P2Q8N4L2 257 aa7.51□□□□□ -1.21
PTPRM-203ENST00000400060 IGHV3OR16-12A0A075B7B8 117 aa7.51□□□□□ -1.21
PTPRM-203ENST00000400060 TANC2Q9HCD6 1990 aa7.51□□□□□ -1.21
PTPRM-203ENST00000400060 TRGV4A0A0C4DH28 118 aa7.51□□□□□ -1.21
PTPRM-203ENST00000400060 MIFP14174 115 aa7.51□□□□□ -1.21
PTPRM-203ENST00000400060 UBE2BP63146 152 aa7.51□□□□□ -1.21
PTPRM-203ENST00000400060 IGLV1-47P01700 117 aa7.51□□□□□ -1.21
PTPRM-203ENST00000400060 CADP27708 2225 aa7.51□□□□□ -1.21
PTPRM-203ENST00000400060 MP68P56378 58 aa7.51□□□□□ -1.21
PTPRM-203ENST00000400060 FHL3Q13643 280 aa7.51□□□□□ -1.21
PTPRM-203ENST00000400060 INTS1Q8N201 2190 aaKnown RBP7.51□□□□□ -1.21
PTPRM-203ENST00000400060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.5□□□□□ -1.21
PTPRM-203ENST00000400060 IGKV2-29A2NJV5 120 aaPredicted RBP7.5□□□□□ -1.21
PTPRM-203ENST00000400060 E7EQL1 145 aa7.5□□□□□ -1.21
PTPRM-203ENST00000400060 C2orf16Q68DN1 1984 aa7.5□□□□□ -1.21
PTPRM-203ENST00000400060 RPL28P46779 137 aaKnown RBP7.5□□□□□ -1.21
PTPRM-203ENST00000400060 STHQ8IWL8 128 aa7.5□□□□□ -1.21
PTPRM-203ENST00000400060 MED12LQ86YW9 2145 aa7.49□□□□□ -1.21
PTPRM-203ENST00000400060 ITLN2Q8WWU7 325 aaPredicted RBP7.49□□□□□ -1.21
PTPRM-203ENST00000400060 EML5Q05BV3 1969 aa7.49□□□□□ -1.21
PTPRM-203ENST00000400060 ZFAND3Q9H8U3 227 aa7.49□□□□□ -1.21
PTPRM-203ENST00000400060 KLK9Q9UKQ9 250 aa7.49□□□□□ -1.21
PTPRM-203ENST00000400060 RNASE13Q5GAN3 156 aaKnown RBP7.49□□□□□ -1.21
PTPRM-203ENST00000400060 TRGV1A0A0A0MS02 117 aa7.48□□□□□ -1.21
PTPRM-203ENST00000400060 UBE2AP49459 152 aa7.48□□□□□ -1.21
PTPRM-203ENST00000400060 DCANP1Q8TF63 244 aa7.48□□□□□ -1.21
PTPRM-203ENST00000400060 NBASA2RRP1 2371 aa7.48□□□□□ -1.21
PTPRM-203ENST00000400060 TSPEAR-AS2P59090 65 aa7.48□□□□□ -1.21
PTPRM-203ENST00000400060 NREPQ16612 68 aa7.48□□□□□ -1.21
PTPRM-203ENST00000400060 MIR7-3HGQ8N6C7 128 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms