RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 NBPF19A0A087WUL8 3843 aa7.32□□□□□ -1.24
CDRT1-204ENST00000395906 H3BRN7 92 aa7.32□□□□□ -1.24
CDRT1-204ENST00000395906 PDE6HQ13956 83 aa7.32□□□□□ -1.24
CDRT1-204ENST00000395906 C22orf34Q6ZV56 151 aa7.32□□□□□ -1.24
CDRT1-204ENST00000395906 LINC01561Q8N1V8 128 aa7.32□□□□□ -1.24
CDRT1-204ENST00000395906 C16orf95Q9H693 158 aa7.32□□□□□ -1.24
CDRT1-204ENST00000395906 TP53TG1Q9Y2A0 90 aa7.32□□□□□ -1.24
CDRT1-204ENST00000395906 FAM201AQ5SY85 155 aa7.32□□□□□ -1.24
CDRT1-204ENST00000395906 GFRALQ6UXV0 394 aa7.32□□□□□ -1.24
CDRT1-204ENST00000395906 IGKV2-40A0A087WW87 121 aaPredicted RBP7.31□□□□□ -1.24
CDRT1-204ENST00000395906 IGKV2D-40P01614 121 aaPredicted RBP7.31□□□□□ -1.24
CDRT1-204ENST00000395906 FHL2Q14192 279 aa7.31□□□□□ -1.24
CDRT1-204ENST00000395906 C6orf226Q5I0X4 101 aa7.31□□□□□ -1.24
CDRT1-204ENST00000395906 WFDC11Q8NEX6 87 aa7.31□□□□□ -1.24
CDRT1-204ENST00000395906 C16orf92Q96LL3 132 aa7.31□□□□□ -1.24
CDRT1-204ENST00000395906 LEPROTO15243 131 aa7.31□□□□□ -1.24
CDRT1-204ENST00000395906 AVPP01185 164 aa7.31□□□□□ -1.24
CDRT1-204ENST00000395906 POLQO75417 2590 aa7.31□□□□□ -1.24
CDRT1-204ENST00000395906 IGKV1D-17A0A075B6S4 117 aa7.3□□□□□ -1.24
CDRT1-204ENST00000395906 A0A0J9YX75 114 aa7.3□□□□□ -1.24
CDRT1-204ENST00000395906 I3L3M4 83 aa7.3□□□□□ -1.24
CDRT1-204ENST00000395906 SUMO2P61956 95 aaKnown RBP7.3□□□□□ -1.24
CDRT1-204ENST00000395906 HCP5Q6MZN7 132 aa7.3□□□□□ -1.24
CDRT1-204ENST00000395906 C9orf139Q6ZV77 190 aa7.3□□□□□ -1.24
CDRT1-204ENST00000395906 ZNF491Q8N8L2 437 aa7.3□□□□□ -1.24
CDRT1-204ENST00000395906 SETXQ7Z333 2677 aaKnown RBP7.3□□□□□ -1.24
CDRT1-204ENST00000395906 SMIM26A0A096LP01 95 aa7.3□□□□□ -1.24
CDRT1-204ENST00000395906 IGHV3-21A0A0B4J1V1 117 aa7.3□□□□□ -1.24
CDRT1-204ENST00000395906 A0A0U1RQV1 116 aa7.3□□□□□ -1.24
CDRT1-204ENST00000395906 SLC50A1Q9BRV3 221 aa7.3□□□□□ -1.24
CDRT1-204ENST00000395906 SDHAF1A6NFY7 115 aa7.29□□□□□ -1.24
CDRT1-204ENST00000395906 BUB3O43684 328 aa7.29□□□□□ -1.24
CDRT1-204ENST00000395906 CDSNQ15517 529 aa7.29□□□□□ -1.24
CDRT1-204ENST00000395906 VMA21Q3ZAQ7 101 aa7.29□□□□□ -1.24
CDRT1-204ENST00000395906 Q8TAT8 98 aa7.29□□□□□ -1.24
CDRT1-204ENST00000395906 TMEM243Q9BU79 118 aa7.29□□□□□ -1.24
CDRT1-204ENST00000395906 IGHV1-69DA0A0B4J2H0 117 aa7.29□□□□□ -1.24
CDRT1-204ENST00000395906 A0A1W2PRX2 142 aa7.29□□□□□ -1.24
CDRT1-204ENST00000395906 USP17L23D6RBM5 183 aa7.29□□□□□ -1.24
CDRT1-204ENST00000395906 PRSS2P07478 247 aa7.29□□□□□ -1.24
CDRT1-204ENST00000395906 ZNF833PQ6ZTB9 187 aa7.28□□□□□ -1.24
CDRT1-204ENST00000395906 BRK1Q8WUW1 75 aa7.28□□□□□ -1.24
CDRT1-204ENST00000395906 IGHV4-4A0A075B6R2 117 aa7.28□□□□□ -1.24
CDRT1-204ENST00000395906 INAFM2P0DMQ5 153 aa7.28□□□□□ -1.24
CDRT1-204ENST00000395906 Q6JHZ5 121 aa7.28□□□□□ -1.24
CDRT1-204ENST00000395906 ZNRF1Q8ND25 227 aa7.28□□□□□ -1.24
CDRT1-204ENST00000395906 NAV3Q8IVL0 2385 aa7.28□□□□□ -1.24
CDRT1-204ENST00000395906 ABCA12Q86UK0 2595 aa7.28□□□□□ -1.24
CDRT1-204ENST00000395906 TSHBP01222 138 aa7.27□□□□□ -1.25
CDRT1-204ENST00000395906 TIRAPP58753 221 aa7.27□□□□□ -1.25
CDRT1-204ENST00000395906 DAZ2Q13117 558 aaKnown RBP7.27□□□□□ -1.25
CDRT1-204ENST00000395906 TMEM30BQ3MIR4 351 aa7.27□□□□□ -1.25
CDRT1-204ENST00000395906 DAZ4Q86SG3 579 aaKnown RBP7.27□□□□□ -1.25
CDRT1-204ENST00000395906 TMEM141Q96I45 108 aa7.27□□□□□ -1.25
CDRT1-204ENST00000395906 DAZ1Q9NQZ3 744 aaKnown RBP7.27□□□□□ -1.25
CDRT1-204ENST00000395906 DAZ3Q9NR90 486 aaKnown RBP7.27□□□□□ -1.25
CDRT1-204ENST00000395906 HELZ2Q9BYK8 2649 aaKnown RBP7.27□□□□□ -1.25
CDRT1-204ENST00000395906 IL17DQ8TAD2 202 aa7.26□□□□□ -1.25
CDRT1-204ENST00000395906 TENM4Q6N022 2769 aa7.26□□□□□ -1.25
CDRT1-204ENST00000395906 A0A0J9YXY3 114 aa7.26□□□□□ -1.25
CDRT1-204ENST00000395906 IGIPA6NJ69 53 aa7.26□□□□□ -1.25
CDRT1-204ENST00000395906 IGLV2-23P01705 113 aa7.26□□□□□ -1.25
CDRT1-204ENST00000395906 MRPS36P82909 103 aaKnown RBP7.26□□□□□ -1.25
CDRT1-204ENST00000395906 ZNF876PQ49A33 203 aa7.26□□□□□ -1.25
CDRT1-204ENST00000395906 SPANXN1Q5VSR9 72 aa7.26□□□□□ -1.25
CDRT1-204ENST00000395906 FP248Q71RG6 208 aaPredicted RBP7.26□□□□□ -1.25
CDRT1-204ENST00000395906 FAM223AQ8IWN6 122 aa7.26□□□□□ -1.25
CDRT1-204ENST00000395906 IGHV3OR16-10A0A075B7F0 116 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 A0A0U1RRA0 63 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 FAM223BA6NKX1 122 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 KNCNA6PVL3 124 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 SRRM5B3KS81 715 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 IGKV1-17P01599 117 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 GRNP28799 593 aaKnown RBP7.25□□□□□ -1.25
CDRT1-204ENST00000395906 DYNAPQ8N1N2 210 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 IGKV3D-20A0A0C4DH25 116 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 IGHV7-4-1A0A0J9YVY3 117 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 ZNRD1Q9P1U0 126 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 SLC25A15Q9Y619 301 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 DSCAMO60469 2012 aa7.25□□□□□ -1.25
CDRT1-204ENST00000395906 IGHG2P01859 326 aa7.24□□□□□ -1.25
CDRT1-204ENST00000395906 COPS9Q8WXC6 57 aa7.24□□□□□ -1.25
CDRT1-204ENST00000395906 LINC00574Q9H8X3 128 aa7.24□□□□□ -1.25
CDRT1-204ENST00000395906 IGKV3D-7A0A0C4DH55 119 aa7.24□□□□□ -1.25
CDRT1-204ENST00000395906 RNF223E7ERA6 249 aa7.24□□□□□ -1.25
CDRT1-204ENST00000395906 M0R1B8 84 aa7.24□□□□□ -1.25
CDRT1-204ENST00000395906 PRB1P04280 392 aa7.24□□□□□ -1.25
CDRT1-204ENST00000395906 FAM19A1Q7Z5A9 133 aa7.24□□□□□ -1.25
CDRT1-204ENST00000395906 TIMM17AQ99595 171 aa7.24□□□□□ -1.25
CDRT1-204ENST00000395906 LITAFQ99732 161 aa7.24□□□□□ -1.25
CDRT1-204ENST00000395906 A0A087WVE0 104 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 M0R381 172 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 RPL27AP46776 148 aaKnown RBP7.23□□□□□ -1.25
CDRT1-204ENST00000395906 FAM222AQ5U5X8 452 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 TMEM61Q8N0U2 210 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 LINC00482Q8N8I6 264 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 NUP37Q8NFH4 326 aa7.23□□□□□ -1.25
CDRT1-204ENST00000395906 RPL39LQ96EH5 51 aaKnown RBP7.23□□□□□ -1.25
CDRT1-204ENST00000395906 USP9YO00507 2555 aaPredicted RBP7.23□□□□□ -1.25
CDRT1-204ENST00000395906 DOPEY1Q5JWR5 2465 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms