RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 ORMDL2Q53FV1 153 aa12.79□□□□□ -0.36
SHTN1-203ENST00000392901 ANKRD39Q53RE8 183 aa12.79□□□□□ -0.36
SHTN1-203ENST00000392901 MORN3Q6PF18 240 aaPredicted RBP12.79□□□□□ -0.36
SHTN1-203ENST00000392901 SLC25A34Q6PIV7 304 aa12.79□□□□□ -0.36
SHTN1-203ENST00000392901 SPXQ9BT56 116 aa12.79□□□□□ -0.36
SHTN1-203ENST00000392901 POLR2KP53803 58 aaKnown RBP12.79□□□□□ -0.36
SHTN1-203ENST00000392901 TCTAP57738 103 aa12.79□□□□□ -0.36
SHTN1-203ENST00000392901 A8MWV9 139 aa12.78□□□□□ -0.36
SHTN1-203ENST00000392901 ATP5LO75964 103 aa12.78□□□□□ -0.36
SHTN1-203ENST00000392901 KRTAP24-1Q3LI83 254 aa12.78□□□□□ -0.36
SHTN1-203ENST00000392901 SDHAF1A6NFY7 115 aa12.77□□□□□ -0.36
SHTN1-203ENST00000392901 RNASE8Q8TDE3 154 aaKnown RBP12.77□□□□□ -0.36
SHTN1-203ENST00000392901 C1QTNF4Q9BXJ3 329 aa12.77□□□□□ -0.36
SHTN1-203ENST00000392901 TRRAPQ9Y4A5 3859 aa12.77□□□□□ -0.37
SHTN1-203ENST00000392901 HINT1P49773 126 aaPredicted RBP12.77□□□□□ -0.37
SHTN1-203ENST00000392901 TOMM6Q96B49 74 aa12.77□□□□□ -0.37
SHTN1-203ENST00000392901 K7EMI3 77 aa12.76□□□□□ -0.37
SHTN1-203ENST00000392901 COX8AP10176 69 aa12.76□□□□□ -0.37
SHTN1-203ENST00000392901 CFAP126Q5VTH2 177 aa12.76□□□□□ -0.37
SHTN1-203ENST00000392901 PIK3CD-AS1Q5SR53 167 aa12.76□□□□□ -0.37
SHTN1-203ENST00000392901 C2orf66Q6UXQ4 117 aa12.76□□□□□ -0.37
SHTN1-203ENST00000392901 TMEM263Q8WUH6 116 aaKnown RBP12.76□□□□□ -0.37
SHTN1-203ENST00000392901 PTH2Q96A98 100 aa12.76□□□□□ -0.37
SHTN1-203ENST00000392901 ZMAT4Q9H898 229 aa12.76□□□□□ -0.37
SHTN1-203ENST00000392901 VCYO14598 125 aa12.75□□□□□ -0.37
SHTN1-203ENST00000392901 RPL32P62910 135 aaKnown RBP12.75□□□□□ -0.37
SHTN1-203ENST00000392901 CSNK1G2-AS1Q8NCQ2 148 aa12.75□□□□□ -0.37
SHTN1-203ENST00000392901 SCGB3A1Q96QR1 104 aa12.75□□□□□ -0.37
SHTN1-203ENST00000392901 TRGV1A0A0A0MS02 117 aa12.74□□□□□ -0.37
SHTN1-203ENST00000392901 TRBV6-5A0A0K0K1A5 114 aa12.74□□□□□ -0.37
SHTN1-203ENST00000392901 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.74□□□□□ -0.37
SHTN1-203ENST00000392901 P0DMU3 169 aa12.74□□□□□ -0.37
SHTN1-203ENST00000392901 FAM231AP0DMU4 169 aa12.74□□□□□ -0.37
SHTN1-203ENST00000392901 FAM231CP0DMU5 169 aa12.74□□□□□ -0.37
SHTN1-203ENST00000392901 COL5A1-AS1Q5SY13 56 aa12.74□□□□□ -0.37
SHTN1-203ENST00000392901 UFSP1Q6NVU6 142 aa12.74□□□□□ -0.37
SHTN1-203ENST00000392901 KIR2DL4Q99706 377 aa12.74□□□□□ -0.37
SHTN1-203ENST00000392901 FGF6P10767 208 aa12.73□□□□□ -0.37
SHTN1-203ENST00000392901 ZFP2Q6ZN57 461 aa12.73□□□□□ -0.37
SHTN1-203ENST00000392901 HHLA3Q9XRX5 114 aa12.73□□□□□ -0.37
SHTN1-203ENST00000392901 TRBV27A0A0K0K1C4 114 aa12.73□□□□□ -0.37
SHTN1-203ENST00000392901 H7C1H1 209 aa12.73□□□□□ -0.37
SHTN1-203ENST00000392901 Q6ZSN1 163 aa12.73□□□□□ -0.37
SHTN1-203ENST00000392901 WFDC9Q8NEX5 89 aa12.73□□□□□ -0.37
SHTN1-203ENST00000392901 IL17DQ8TAD2 202 aa12.73□□□□□ -0.37
SHTN1-203ENST00000392901 MRPL35Q9NZE8 188 aaKnown RBP12.73□□□□□ -0.37
SHTN1-203ENST00000392901 NACAE9PAV3 2078 aa12.72□□□□□ -0.37
SHTN1-203ENST00000392901 IGKCP01834 107 aa12.72□□□□□ -0.37
SHTN1-203ENST00000392901 NOP10Q9NPE3 64 aaKnown RBP12.72□□□□□ -0.37
SHTN1-203ENST00000392901 A0A087WX48 190 aa12.71□□□□□ -0.37
SHTN1-203ENST00000392901 RRN3P1Q2M238 152 aa12.71□□□□□ -0.37
SHTN1-203ENST00000392901 MPV17L2Q567V2 206 aa12.71□□□□□ -0.37
SHTN1-203ENST00000392901 Q6ZTI0 123 aa12.71□□□□□ -0.37
SHTN1-203ENST00000392901 C2orf91Q6ZV80 131 aa12.71□□□□□ -0.37
SHTN1-203ENST00000392901 LINC00469Q8N7U9 141 aa12.71□□□□□ -0.37
SHTN1-203ENST00000392901 RS1O15537 224 aa12.71□□□□□ -0.37
SHTN1-203ENST00000392901 Q9UF83 564 aa12.71□□□□□ -0.37
SHTN1-203ENST00000392901 FBN1P35555 2871 aaKnown RBP12.7□□□□□ -0.38
SHTN1-203ENST00000392901 RHODO00212 210 aa12.7□□□□□ -0.38
SHTN1-203ENST00000392901 DPM2O94777 84 aa12.7□□□□□ -0.38
SHTN1-203ENST00000392901 RPL39P62891 51 aaKnown RBP12.7□□□□□ -0.38
SHTN1-203ENST00000392901 C16orf74Q96GX8 76 aa12.7□□□□□ -0.38
SHTN1-203ENST00000392901 NEXN-AS1Q8NBZ9 246 aa12.7□□□□□ -0.38
SHTN1-203ENST00000392901 OR4C5Q8NGB2 326 aa12.7□□□□□ -0.38
SHTN1-203ENST00000392901 ZMAT5Q9UDW3 170 aaKnown RBP12.7□□□□□ -0.38
SHTN1-203ENST00000392901 TP53TG1Q9Y2A0 90 aa12.7□□□□□ -0.38
SHTN1-203ENST00000392901 ERASQ7Z444 233 aa12.69□□□□□ -0.38
SHTN1-203ENST00000392901 C3orf56Q8N813 242 aa12.69□□□□□ -0.38
SHTN1-203ENST00000392901 BAALCQ8WXS3 180 aa12.69□□□□□ -0.38
SHTN1-203ENST00000392901 PLAC8L1A1L4L8 177 aa12.69□□□□□ -0.38
SHTN1-203ENST00000392901 IGHV3-53P01767 116 aa12.69□□□□□ -0.38
SHTN1-203ENST00000392901 PRIMA1Q86XR5 153 aa12.69□□□□□ -0.38
SHTN1-203ENST00000392901 BOD1L2Q8IYS8 172 aa12.69□□□□□ -0.38
SHTN1-203ENST00000392901 EDA2RQ9HAV5 297 aa12.69□□□□□ -0.38
SHTN1-203ENST00000392901 CYSLTR1Q9Y271 337 aa12.69□□□□□ -0.38
SHTN1-203ENST00000392901 TNFRSF18Q9Y5U5 241 aa12.69□□□□□ -0.38
SHTN1-203ENST00000392901 IGKV2D-26A0A0A0MRZ7 120 aa12.68□□□□□ -0.38
SHTN1-203ENST00000392901 NMUP48645 174 aa12.68□□□□□ -0.38
SHTN1-203ENST00000392901 PCP2Q8IVA1 136 aa12.68□□□□□ -0.38
SHTN1-203ENST00000392901 ZNF479Q96JC4 524 aa12.68□□□□□ -0.38
SHTN1-203ENST00000392901 TRAV12-1A0A0B4J245 112 aa12.67□□□□□ -0.38
SHTN1-203ENST00000392901 I3L3M4 83 aa12.67□□□□□ -0.38
SHTN1-203ENST00000392901 TSHBP01222 138 aa12.67□□□□□ -0.38
SHTN1-203ENST00000392901 DAZ2Q13117 558 aaKnown RBP12.67□□□□□ -0.38
SHTN1-203ENST00000392901 ZC2HC1BQ5TFG8 222 aa12.67□□□□□ -0.38
SHTN1-203ENST00000392901 EMP1P54849 157 aa12.67□□□□□ -0.38
SHTN1-203ENST00000392901 IGIPA6NJ69 53 aa12.66□□□□□ -0.38
SHTN1-203ENST00000392901 G0S2P27469 103 aa12.66□□□□□ -0.38
SHTN1-203ENST00000392901 RIPPLY3P57055 190 aa12.66□□□□□ -0.38
SHTN1-203ENST00000392901 BVES-AS1Q5T3Y7 98 aa12.66□□□□□ -0.38
SHTN1-203ENST00000392901 CHTOPQ9Y3Y2 248 aaKnown RBP12.66□□□□□ -0.38
SHTN1-203ENST00000392901 GAGE12BA1L429 117 aa12.66□□□□□ -0.38
SHTN1-203ENST00000392901 F8VRH5 84 aa12.66□□□□□ -0.38
SHTN1-203ENST00000392901 GAGE7O76087 117 aa12.66□□□□□ -0.38
SHTN1-203ENST00000392901 GAGE12FP0CL80 117 aa12.66□□□□□ -0.38
SHTN1-203ENST00000392901 GAGE12GP0CL81 117 aa12.66□□□□□ -0.38
SHTN1-203ENST00000392901 GAGE12IP0CL82 117 aa12.66□□□□□ -0.38
SHTN1-203ENST00000392901 ZNF25P17030 456 aaPredicted RBP12.66□□□□□ -0.38
SHTN1-203ENST00000392901 PRSS29PA6NIE9 313 aa12.65□□□□□ -0.38
SHTN1-203ENST00000392901 TTTY13Q9BZ97 58 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms