RNA–Protein interactions for RNA: ENST00000392003.6

COL6A3-204, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2 BASIC

Gene COL6A3, Length 3,464 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-204ENST00000392003 ORMDL2Q53FV1 153 aa7.26□□□□□ -1.25
COL6A3-204ENST00000392003 C14orf178Q8N769 122 aaPredicted RBP7.26□□□□□ -1.25
COL6A3-204ENST00000392003 SMIM2Q9BVW6 85 aa7.26□□□□□ -1.25
COL6A3-204ENST00000392003 FASNP49327 2511 aaKnown RBP7.25□□□□□ -1.25
COL6A3-204ENST00000392003 HOXA3O43365 443 aaPredicted RBP7.25□□□□□ -1.25
COL6A3-204ENST00000392003 PSMB8P28062 276 aa7.25□□□□□ -1.25
COL6A3-204ENST00000392003 SNRPD3P62318 126 aaKnown RBP7.25□□□□□ -1.25
COL6A3-204ENST00000392003 SETD2Q9BYW2 2564 aaPredicted RBP7.25□□□□□ -1.25
COL6A3-204ENST00000392003 IGLV2-18A0A075B6J9 118 aa7.25□□□□□ -1.25
COL6A3-204ENST00000392003 GNRH2O43555 120 aa7.25□□□□□ -1.25
COL6A3-204ENST00000392003 SUMO2P61956 95 aaKnown RBP7.25□□□□□ -1.25
COL6A3-204ENST00000392003 LRRC75A-AS1Q8N1F1 130 aa7.25□□□□□ -1.25
COL6A3-204ENST00000392003 FAM236AA0A1B0GUQ0 79 aa7.24□□□□□ -1.25
COL6A3-204ENST00000392003 FAM236BA0A1B0GV22 79 aa7.24□□□□□ -1.25
COL6A3-204ENST00000392003 TMEM126AQ9H061 195 aa7.24□□□□□ -1.25
COL6A3-204ENST00000392003 IGLL5B9A064 214 aa7.24□□□□□ -1.25
COL6A3-204ENST00000392003 E9PLD3 99 aa7.24□□□□□ -1.25
COL6A3-204ENST00000392003 SPRY2O43597 315 aa7.24□□□□□ -1.25
COL6A3-204ENST00000392003 ACANP16112 2415 aa7.24□□□□□ -1.25
COL6A3-204ENST00000392003 ZNF688P0C7X2 276 aa7.24□□□□□ -1.25
COL6A3-204ENST00000392003 FAM19A4Q96LR4 140 aa7.24□□□□□ -1.25
COL6A3-204ENST00000392003 SCGB3A1Q96QR1 104 aa7.24□□□□□ -1.25
COL6A3-204ENST00000392003 CELSR2Q9HCU4 2923 aa7.24□□□□□ -1.25
COL6A3-204ENST00000392003 APRG1Q8IVJ8 170 aa7.23□□□□□ -1.25
COL6A3-204ENST00000392003 DLX4Q92988 240 aaPredicted RBP7.23□□□□□ -1.25
COL6A3-204ENST00000392003 HELZ2Q9BYK8 2649 aaKnown RBP7.23□□□□□ -1.25
COL6A3-204ENST00000392003 CD7P09564 240 aa7.23□□□□□ -1.25
COL6A3-204ENST00000392003 TRAV12-3A0A0B4J271 114 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 TINCRA0A1B0GVN0 87 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 J3KT08 172 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 ELANEP08246 267 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 GTSCR1Q86UQ5 136 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 WFDC11Q8NEX6 87 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 PRADC1Q9BSG0 188 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 ZANQ9Y493 2812 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 MTORP42345 2549 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 F5H697 171 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 SYNJ2BPP57105 145 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 OR13C6PQ8NH95 151 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 DCANP1Q8TF63 244 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 ZMAT4Q9H898 229 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 MRPL35Q9NZE8 188 aaKnown RBP7.22□□□□□ -1.25
COL6A3-204ENST00000392003 UBR5O95071 2799 aaPredicted RBP7.22□□□□□ -1.25
COL6A3-204ENST00000392003 KLLNB2CW77 178 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 IGKV3-20P01619 116 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 LGALS1P09382 135 aaKnown RBP7.22□□□□□ -1.25
COL6A3-204ENST00000392003 HERVK_113P63121 156 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 C10orf99Q6UWK7 81 aa7.22□□□□□ -1.25
COL6A3-204ENST00000392003 A0A096LNT2 108 aa7.21□□□□□ -1.25
COL6A3-204ENST00000392003 SNCGO76070 127 aa7.21□□□□□ -1.25
COL6A3-204ENST00000392003 DUSP14O95147 198 aaKnown RBP7.21□□□□□ -1.25
COL6A3-204ENST00000392003 OXTP01178 125 aa7.21□□□□□ -1.25
COL6A3-204ENST00000392003 RNASE3P12724 160 aaKnown RBP7.21□□□□□ -1.25
COL6A3-204ENST00000392003 PLNP26678 52 aa7.21□□□□□ -1.25
COL6A3-204ENST00000392003 RPL39LQ96EH5 51 aaKnown RBP7.21□□□□□ -1.25
COL6A3-204ENST00000392003 SVEP1Q4LDE5 3571 aa7.21□□□□□ -1.26
COL6A3-204ENST00000392003 RS1O15537 224 aa7.21□□□□□ -1.26
COL6A3-204ENST00000392003 Q6YL49 198 aa7.21□□□□□ -1.26
COL6A3-204ENST00000392003 BAALCQ8WXS3 180 aa7.21□□□□□ -1.26
COL6A3-204ENST00000392003 MDFICQ9P1T7 246 aa7.21□□□□□ -1.26
COL6A3-204ENST00000392003 H7C1H1 209 aa7.21□□□□□ -1.26
COL6A3-204ENST00000392003 DUX3Q96PT4 197 aa7.21□□□□□ -1.26
COL6A3-204ENST00000392003 PLA2G2AP14555 144 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 MRAPQ8TCY5 172 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 ODF3Q96PU9 254 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 HHLA3Q9XRX5 114 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 CFAP126Q5VTH2 177 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 TRAV12-1A0A0B4J245 112 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 A0A0J9YX75 114 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 K7EQG2 157 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 C2orf66Q6UXQ4 117 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 IL17DQ8TAD2 202 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 TOMM6Q96B49 74 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 UBE2E2Q96LR5 201 aa7.2□□□□□ -1.26
COL6A3-204ENST00000392003 F8VRH5 84 aa7.19□□□□□ -1.26
COL6A3-204ENST00000392003 LGALS9O00182 355 aa7.19□□□□□ -1.26
COL6A3-204ENST00000392003 HIGD1BQ9P298 99 aa7.19□□□□□ -1.26
COL6A3-204ENST00000392003 SORL1Q92673 2214 aa7.19□□□□□ -1.26
COL6A3-204ENST00000392003 IGHV4OR15-8A0A075B7B6 117 aa7.19□□□□□ -1.26
COL6A3-204ENST00000392003 A0A087WW49 117 aa7.19□□□□□ -1.26
COL6A3-204ENST00000392003 LINC01549A6NIU2 74 aa7.19□□□□□ -1.26
COL6A3-204ENST00000392003 NXPH4O95158 308 aa7.19□□□□□ -1.26
COL6A3-204ENST00000392003 HOXD3P31249 432 aaPredicted RBP7.19□□□□□ -1.26
COL6A3-204ENST00000392003 TRPT1Q86TN4 253 aaKnown RBP7.19□□□□□ -1.26
COL6A3-204ENST00000392003 TEX15Q9BXT5 2789 aa7.19□□□□□ -1.26
COL6A3-204ENST00000392003 IGKV2D-26A0A0A0MRZ7 120 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 TMEM262E9PQX1 116 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 CHAC1Q9BUX1 264 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 CELSR1Q9NYQ6 3014 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 CSMD1Q96PZ7 3565 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 WNK1Q9H4A3 2382 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 HLA-DRB4P13762 266 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 FAM74A4Q5TZK3 123 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 HLA-DRB4X5D2U9 266 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 FLNAP21333 2647 aaKnown RBP7.18□□□□□ -1.26
COL6A3-204ENST00000392003 NOTCH3Q9UM47 2321 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 A0A087WWL8 130 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 VCYO14598 125 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 SPINK13Q1W4C9 94 aa7.18□□□□□ -1.26
COL6A3-204ENST00000392003 ZNF702PQ9H963 129 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms