RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 RPL7L1Q6DKI1 246 aaKnown RBP-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 OR9Q1Q8NGQ5 310 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 CCDC115Q96NT0 180 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 PLXNA2O75051 1894 aa-0.72□□□□□ -2.52
SNORD28B-201ENST00000390993 EIF3AQ14152 1382 aaKnown RBP-0.72□□□□□ -2.53
SNORD28B-201ENST00000390993 MXRA5Q9NR99 2828 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 ERCC6L2Q5T890 1561 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 PCLOQ9Y6V0 5065 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 DPM2O94777 84 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 COX6B1P14854 86 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 SPRR2AP35326 72 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 MT4P47944 62 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 POLR2HP52434 150 aaKnown RBP-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 HAMPP81172 84 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 TMEM78Q5T7P6 136 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 TMEM91Q6ZNR0 172 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 ATP11AUNQ6ZP68 121 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 SMIM4Q8WVI0 70 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 MAFIPQ8WZ33 124 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 RPRMQ9NS64 109 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 GVINP1Q7Z2Y8 2422 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 HERC2O95714 4834 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 ROCK1Q13464 1354 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 ATRQ13535 2644 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 PHIPQ8WWQ0 1821 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 WDR7Q9Y4E6 1490 aa-0.73□□□□□ -2.53
SNORD28B-201ENST00000390993 TGP01266 2768 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 A0A1W2PRE2 83 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 J3KT08 172 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 BCE1O60756 84 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 PAEPP09466 180 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 HLA-DRB4P13762 266 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 PPP1R2P3Q6NXS1 205 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 CTAGE3PQ8IX95 158 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 TMEM35BQ8NCS4 154 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 FXYD6Q9H0Q3 95 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 HLA-DRB4X5D2U9 266 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 FER1L6Q2WGJ9 1857 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 MYH3P11055 1940 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 SVEP1Q4LDE5 3571 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 IBTKQ9P2D0 1353 aaPredicted RBP-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 SYNMO15061 1565 aa-0.74□□□□□ -2.53
SNORD28B-201ENST00000390993 NRXN2Q9P2S2 1712 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 PARP14Q460N5 1801 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 WNK3Q9BYP7 1800 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 SPRR1BP22528 89 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 CLLU1Q5K131 121 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 SPANXN1Q5VSR9 72 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 OR8I2Q8N0Y5 310 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 BANF2Q9H503 90 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 GID8Q9NWU2 228 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 DNAJC15Q9Y5T4 150 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 ZMYM4Q5VZL5 1548 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 CASZ1Q86V15 1759 aa-0.75□□□□□ -2.53
SNORD28B-201ENST00000390993 TNFP01375 233 aa-0.76□□□□□ -2.53
SNORD28B-201ENST00000390993 TOMM20LQ6UXN7 152 aa-0.76□□□□□ -2.53
SNORD28B-201ENST00000390993 PTPRMP28827 1452 aa-0.76□□□□□ -2.53
SNORD28B-201ENST00000390993 DNAJC13O75165 2243 aa-0.76□□□□□ -2.53
SNORD28B-201ENST00000390993 PCNX1Q96RV3 2341 aa-0.76□□□□□ -2.53
SNORD28B-201ENST00000390993 KDM3BQ7LBC6 1761 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 IQSEC2Q5JU85 1478 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 DNAH6Q9C0G6 4158 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 RPL7P18124 248 aaKnown RBP-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 KLK9Q2XQG4 91 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 SAMD13Q5VXD3 122 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 MNS1Q8NEH6 495 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 HOPXQ9BPY8 73 aaPredicted RBP-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 PCBD2Q9H0N5 130 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 NDUFA12Q9UI09 145 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 R4GMQ9 66 aa-0.77□□□□□ -2.53
SNORD28B-201ENST00000390993 IFT172Q9UG01 1749 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 SETD2Q9BYW2 2564 aaPredicted RBP-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 OVOS2A0A0G2JMS6 1433 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 E5RI56 91 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 I3L2K1 104 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 PIRTP0C851 137 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 SPRR2EP22531 72 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 UBE2D1P51668 147 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 C9orf116Q5BN46 136 aaPredicted RBP-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 LINC01545Q5VT33 79 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 ZNF818PQ6ZRF7 136 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 VSTM2AQ8TAG5 236 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 SKA2Q8WVK7 121 aaPredicted RBP-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 SDF2Q99470 211 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 SAR1AQ9NR31 198 aa-0.78□□□□□ -2.53
SNORD28B-201ENST00000390993 LRRC37A3O60309 1634 aa-0.78□□□□□ -2.54
SNORD28B-201ENST00000390993 GOLGA4Q13439 2230 aaKnown RBP-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 KDM5CP41229 1560 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 NBPF19A0A087WUL8 3843 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 TSC2P49815 1807 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 CTXND1A0A1B0GTU2 59 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 MT-ND4LP03901 98 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 PIPP12273 146 aaPredicted RBP-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 NCS1P62166 190 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 COX17Q14061 63 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 TMEM128Q5BJH2 165 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 TMEM244Q5VVB8 128 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 TCTE3Q8IZS6 198 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 SPANXCQ9NY87 97 aa-0.79□□□□□ -2.54
SNORD28B-201ENST00000390993 SIPA1L3O60292 1781 aaPredicted RBP-0.79□□□□□ -2.54
Retrieved 100 of 20,778 RNA–protein pairs in 587.2 ms